mRNA_M-pyrifera_M_contig76828.18100.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76828.18100.1
Unique NamemRNA_M-pyrifera_M_contig76828.18100.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI001B88C795 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88C795)

HSP 1 Score: 126 bits (316), Expect = 3.420e-29
Identity = 88/242 (36.36%), Postives = 135/242 (55.79%), Query Frame = 1 
Query:   58 LVKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVA--SSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLK 771
            ++ ++ +   S ++ IR D   + DVG R+A + +LL SYN  WL  GL  ++   IV   +   L Q L+  I +++L N +I+  Y  P+  G    G  E L  F L++FL L  +LD AK   +      CLF KDA+ KSS  +L  F    ++ E   T R L  +GY + HVQS L+E+D+  +T++A  L DG+RL +LAE+++  G+    + LRTP ++   KLHNV + LK
Sbjct:   24 VMSRLEIEIESGRLAIRCDRSPHSDVGAREALLQMLL-SYNPIWLKLGLETIFGEEIVVINNQQSLSQVLSLYIQSRLLNNHQIADQYYQPTVLGHYGQGFNEALCQFILKKFLLLILLLDKAKLTRLID-HNPCLFVKDAQIKSSREMLLSFSRNFLSGEGDLT-RHLQHLGYSVSHVQSSLDEFDYT-VTNLATDLQDGLRLTRLAEILT--GEWKFSELLRTPATTKMQKLHNVEIALK 259
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI0007042AC0 (abnormal spindle-like microcephaly-associated protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=UPI0007042AC0)

HSP 1 Score: 123 bits (309), Expect = 3.480e-28
Identity = 89/243 (36.63%), Postives = 134/243 (55.14%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +KK+ +   +R++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  VY   I   S+     LA  I +++L N +I+  Y  P+   L +DG +E L  F L++ L L   LD AK   +      CLF KDA+ KSS  VL  F    ++ E    SR L  +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    SL  +LR P  S   K+HNV + L  L+E
Sbjct:  534 IKKLEVEIETRRLLVRKDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETVYGELIALESNSDIMGLAMFILSRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDHAKRSRIID-HDPCLFCKDAEFKSSKDVLLAFSRDFLSGEG-DLSRHLGFLGLSVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTVELLTK--NWSLSKKLRVPAISRLQKMHNVDIALHVLKE 770
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: K7FHR7_PELSI (Uncharacterized protein n=1 Tax=Pelodiscus sinensis TaxID=13735 RepID=K7FHR7_PELSI)

HSP 1 Score: 123 bits (309), Expect = 3.480e-28
Identity = 89/243 (36.63%), Postives = 134/243 (55.14%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +KK+ +   +R++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  VY   I   S+     LA  I +++L N +I+  Y  P+   L +DG +E L  F L++ L L   LD AK   +      CLF KDA+ KSS  VL  F    ++ E    SR L  +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    SL  +LR P  S   K+HNV + L  L+E
Sbjct:  640 IKKLEVEIETRRLLVRKDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETVYGELIALESNSDIMGLAMFILSRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDHAKRSRIID-HDPCLFCKDAEFKSSKDVLLAFSRDFLSGEG-DLSRHLGFLGLSVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTVELLTK--NWSLSKKLRVPAISRLQKMHNVDIALHVLKE 876
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI00193F0C66 (LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein n=5 Tax=Durocryptodira TaxID=1579337 RepID=UPI00193F0C66)

HSP 1 Score: 122 bits (306), Expect = 8.750e-28
Identity = 89/243 (36.63%), Postives = 133/243 (54.73%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +KK+     +R++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  VY   I   S+     LA  I +++L N +I+  Y  P+   L +DG +E L  F L++ L L   LD AK   +      CLF KDA+ K+S  VL  F    ++ E    SR L  +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    SL  +LR P  S   K+HNV V L  L+E
Sbjct:  740 IKKLEFEIETRRLLVRKDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETVYGELIALESNSDIMGLAMFILSRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDHAKQSRIID-HDPCLFCKDAEFKNSKDVLLAFSRDFLSGEG-DLSRHLGFLGLPVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTMELLTK--NWSLSKKLRVPAISRXQKMHNVDVALHVLKE 976
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI00193F50EE (LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Mauremys reevesii TaxID=260615 RepID=UPI00193F50EE)

HSP 1 Score: 122 bits (305), Expect = 1.070e-27
Identity = 89/243 (36.63%), Postives = 133/243 (54.73%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +KK+     +R++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  VY   I   S+     LA  I +++L N +I+  Y  P+   L +DG +E L  F L++ L L   LD AK   +      CLF KDA+ K+S  VL  F    ++ E    SR L  +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    SL  +LR P  S   K+HNV V L  L+E
Sbjct:  741 IKKLEFEIETRRLLVRKDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETVYGELIALESNSDIMGLAMFILSRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDHAKQSRIID-HDPCLFCKDAEFKNSKDVLLAFSRDFLSGEG-DLSRHLGFLGLPVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTMELLTK--NWSLSKKLRVPAISRLQKMHNVDVALHVLKE 977
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI0004F0DFFB (abnormal spindle-like microcephaly-associated protein n=1 Tax=Acanthisitta chloris TaxID=57068 RepID=UPI0004F0DFFB)

HSP 1 Score: 122 bits (305), Expect = 1.180e-27
Identity = 88/243 (36.21%), Postives = 134/243 (55.14%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +KK+ +   SR++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  VY   I   S+     LA  I  ++L N EI+  Y  PS   L ++G +E L  F L++ L L   LD AK   +      CLF KDA+ K+S  +L  F    ++ E    SR L  +G  + H+Q+ L+E+DFA ++++A  L  G+RL +  E+++K    +L  QLR P  S   K+HNV + LK L+E
Sbjct:  639 IKKLEVEIESRRLLVRRDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETVYGELIALESNSDVMGLALFILNRLLWNPEIAAEYRHPSVPHLYREGHEEALSKFTLKKLLLLVCFLDCAKRSRMIA-HDPCLFCKDAEFKASKDLLLAFSRDFLSGEG-DLSRHLGFLGLPVSHIQTPLDEFDFA-VSNLAVDLQCGIRLVRAMELLTK--NWNLSKQLRVPAISRLQKMHNVDIALKVLKE 875
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI00052F0259 (abnormal spindle-like microcephaly-associated protein n=1 Tax=Tinamus guttatus TaxID=94827 RepID=UPI00052F0259)

HSP 1 Score: 122 bits (305), Expect = 1.190e-27
Identity = 91/243 (37.45%), Postives = 133/243 (54.73%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +KK+     SR++ +R D  L+ DVG+R+  ++ LL SYN  WL  GL  VY   I   S+     LA  I  ++L N +I+  Y  P+   L ++G +E L  F L++ L L   LD AK   +      CLF KDA+ KSS  VL  F    ++ E    SR LS +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    +L  QLR P  S   K+HNV + L  L+E
Sbjct:  672 IKKLEFEVESRRLLVRKDRHLWKDVGERQKVLNWLL-SYNPLWLRIGLETVYGELISLESNSDVMGLAIFILNRLLWNPDIAAEYRHPTVPHLYREGHEEALSKFTLKKMLLLICFLDCAKKSRIID-HDPCLFCKDAEFKSSKDVLLAFSRDFLSGEG-DLSRHLSFLGLPVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTMELLTK--NWNLSKQLRVPAISRLQKMHNVDIVLNVLKE 908
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: A0A8C3IZF6_CHRPI (Calponin-homology (CH) domain-containing protein n=4 Tax=Testudinoidea TaxID=8486 RepID=A0A8C3IZF6_CHRPI)

HSP 1 Score: 121 bits (304), Expect = 1.410e-27
Identity = 88/243 (36.21%), Postives = 133/243 (54.73%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +K++     SR++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  +Y   I   S+     LA  I +++L N +I+  Y  P+   L +DG +E L  F L++ L L   LD AK   +      CLF KDA+ K+S  VL  F    ++ E    SR L  +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    SL  +LR P  S   K+HNV V L  L+E
Sbjct:   32 IKRLEFEIESRRLLVRKDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETIYGELIALESNSDIMGLAMFILSRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDHAKQSRIID-HDPCLFCKDAEFKNSKDVLLAFSRDFLSGEG-DLSRHLGFLGLPVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTMELLTK--NWSLSKKLRVPAISRLQKMHNVDVALHVLKE 268
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: A0A452GLV7_9SAUR (Abnormal spindle microtubule assembly n=1 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452GLV7_9SAUR)

HSP 1 Score: 121 bits (304), Expect = 1.530e-27
Identity = 87/243 (35.80%), Postives = 134/243 (55.14%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQE 783
            +K++     +R++ +R D  L+ D+G+R+  ++ LL SYN  WL  GL  +Y   I   S+     LA  I +++L N +I+  Y  P+   L +DG +E L  F L++ L L   LD AK   +      CLF KDA+ K+S  VL  F    ++ E    SR L  +G  + HVQ+ L+E+DFA +T++A  L  G+RL +  E+++K    SL  +LR P  S   K+HNV V L+ L+E
Sbjct:  732 IKRLEFEIETRRLLVRKDRHLWKDIGERQKVLNWLL-SYNPLWLRIGLETIYGELIALESNSDIMGLAMFILSRLLWNPDIAAEYRHPTVPHLYRDGHEEALSKFTLKKLLLLVCFLDHAKQSRIID-HDPCLFCKDAEFKNSKDVLLAFSRDFLSGEG-DLSRHLGFLGLPVSHVQTPLDEFDFA-VTNLAVDLQCGIRLVRTMELLTK--NWSLSKKLRVPAISRLQKMHNVDVALRVLKE 968
[Close]
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Match: UPI00046BC29D (abnormal spindle-like microcephaly-associated protein n=1 Tax=Eptesicus fuscus TaxID=29078 RepID=UPI00046BC29D)

HSP 1 Score: 121 bits (304), Expect = 1.600e-27
Identity = 89/242 (36.78%), Postives = 134/242 (55.37%), Query Frame = 1 
Query:   61 VKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDSYNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETPS--GLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKAKSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTSMAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKHLQ 780
            +KK+ +   +R++ +R D  L+ DVG+R+  ++ LL SYN  WL  GL  V+   I    +     LA  I  ++L N +I+  Y  PS   L +DG +E L AF L++FL L   LD AK   +      CLF KDA+ K+S  +L  F    ++ E    SR LS +G  + HVQ+ L+E+DFA +T++A  L  GVRL +  E++++     L  QLR P  S   K+HNV + L+ L+
Sbjct:  706 IKKLEVEITARRLAVRRDRHLWKDVGERQKVLNWLL-SYNPLWLRIGLETVFGELIALEDNSDVTGLAVFILNRLLWNPDIAAEYRHPSVPHLYRDGHEEALSAFTLKKFLLLVCFLDRAKLSRLLD-HDPCLFCKDAEFKASRDILLAFSRSFLSGEG-DLSRHLSWLGLPVSHVQTPLDEFDFA-VTNLAVDLQCGVRLVRAMELLTR--NWDLSKQLRMPAISRLQKMHNVDLALQALR 941
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76828.18100.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001B88C7953.420e-2936.36abnormal spindle-like microcephaly-associated prot... [more]
UPI0007042AC03.480e-2836.63abnormal spindle-like microcephaly-associated prot... [more]
K7FHR7_PELSI3.480e-2836.63Uncharacterized protein n=1 Tax=Pelodiscus sinensi... [more]
UPI00193F0C668.750e-2836.63LOW QUALITY PROTEIN: abnormal spindle-like microce... [more]
UPI00193F50EE1.070e-2736.63LOW QUALITY PROTEIN: abnormal spindle-like microce... [more]
UPI0004F0DFFB1.180e-2736.21abnormal spindle-like microcephaly-associated prot... [more]
UPI00052F02591.190e-2737.45abnormal spindle-like microcephaly-associated prot... [more]
A0A8C3IZF6_CHRPI1.410e-2736.21Calponin-homology (CH) domain-containing protein n... [more]
A0A452GLV7_9SAUR1.530e-2735.80Abnormal spindle microtubule assembly n=1 Tax=Goph... [more]
UPI00046BC29D1.600e-2736.78abnormal spindle-like microcephaly-associated prot... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76828contigM-pyrifera_M_contig76828:26..811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score125.6
Seed ortholog evalue3.4e-26
Seed eggNOG ortholog13735.ENSPSIP00000007577
Preferred nameASPM
KEGG koko:K16743
Hectar predicted targeting categorymitochondrion
GOsGO:0000003,GO:0000132,GO:0000212,GO:0000226,GO:0000278,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005875,GO:0005886,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007020,GO:0007049,GO:0007051,GO:0007052,GO:0007097,GO:0007163,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008017,GO:0008092,GO:0008150,GO:0008283,GO:0008284,GO:0008356,GO:0008406,GO:0008584,GO:0009653,GO:0009786,GO:0009887,GO:0009966,GO:0009967,GO:0009987,GO:0009994,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017022,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030010,GO:0030029,GO:0030036,GO:0030037,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030706,GO:0030723,GO:0030900,GO:0030953,GO:0030954,GO:0031109,GO:0031122,GO:0031532,GO:0032027,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0034622,GO:0036445,GO:0036449,GO:0040001,GO:0040007,GO:0040011,GO:0042078,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045478,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0046785,GO:0046907,GO:0048103,GO:0048132,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051233,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051258,GO:0051276,GO:0051293,GO:0051294,GO:0051295,GO:0051296,GO:0051301,GO:0051302,GO:0051321,GO:0051383,GO:0051418,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051647,GO:0051649,GO:0051651,GO:0051653,GO:0051656,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0090527,GO:0097150,GO:0097431,GO:0097435,GO:0098590,GO:0098722,GO:0098727,GO:0098728,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1902850,GO:1903046,GO:1903047,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648
EggNOG free text desc.IQ calmodulin-binding motif
EggNOG OGs38GA0@33154,3BEQM@33208,3CVJ0@33213,486R5@7711,48Y6N@7742,4CBSY@8459,KOG0165@1,KOG0165@2759
COG Functional cat.Z
Best tax levelTestudines
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons1
Model size786
Cds size762
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.568379-CDS-M-pyrifera_M_contig76828:25..7871622816667.568379-CDS-M-pyrifera_M_contig76828:25..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76828 26..787 -
1692278108.0984957-CDS-M-pyrifera_M_contig76828:25..7871692278108.0984957-CDS-M-pyrifera_M_contig76828:25..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76828 26..787 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.5812602-UTR-M-pyrifera_M_contig76828:787..8111622816667.5812602-UTR-M-pyrifera_M_contig76828:787..811Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76828 788..811 -
1692278108.108672-UTR-M-pyrifera_M_contig76828:787..8111692278108.108672-UTR-M-pyrifera_M_contig76828:787..811Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76828 788..811 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76828.18100.1prot_M-pyrifera_M_contig76828.18100.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76828 26..787 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76828.18100.1

>prot_M-pyrifera_M_contig76828.18100.1 ID=prot_M-pyrifera_M_contig76828.18100.1|Name=mRNA_M-pyrifera_M_contig76828.18100.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=254bp
MGKRLMAAAKSLVKKVSLACYSRKVTIRHDVDLYIDVGQRKAAIDLLLDS
YNHSWLAFGLGAVYNCTIVASSSDLRQALASAISAKMLRNAEISQSYETP
SGLLKDGCKEELDAFRLQQFLTLFWVLDTAKYKNVFGVRTACLFNKDAKA
KSSVRVLAQFIALCVAEESIATSRTLSAIGYELQHVQSFLEEYDFAGLTS
MAEGLSDGVRLCKLAEVVSKPGKGSLFDQLRTPPSSVSSKLHNVGVGLKH
LQES
back to top

mRNA from alignment at M-pyrifera_M_contig76828:26..811-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76828.18100.1 ID=mRNA_M-pyrifera_M_contig76828.18100.1|Name=mRNA_M-pyrifera_M_contig76828.18100.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig76828:26..811- (Macrocystis pyrifera P11B4 male)
CTTCCTCGCGCACAGACCGCTCGCATGGGCAAGAGGCTGATGGCTGCCGC
CAAGAGCCTCGTGAAGAAGGTCTCTCTTGCGTGCTACTCACGCAAGGTGA
CCATCAGGCATGATGTTGACCTCTACATCGACGTCGGCCAGCGCAAGGCT
GCTATCGACCTCCTCCTCGATTCCTACAACCACTCGTGGCTCGCATTCGG
CCTGGGGGCGGTGTACAACTGTACGATCGTCGCCAGCTCGAGTGATCTCC
GCCAGGCCCTCGCCTCTGCCATCTCGGCAAAGATGTTGCGCAACGCTGAG
ATTTCTCAATCATACGAGACGCCCAGTGGCCTCCTCAAGGACGGATGCAA
GGAAGAGCTGGATGCGTTCCGCCTGCAGCAATTCCTCACTCTCTTCTGGG
TGCTGGACACGGCCAAGTACAAGAACGTCTTCGGCGTGCGCACGGCGTGC
CTCTTCAACAAGGATGCCAAGGCAAAGAGCAGTGTTCGTGTCCTCGCCCA
GTTCATTGCCCTCTGTGTGGCCGAGGAGAGCATTGCGACGAGCCGCACCC
TCTCAGCCATTGGCTACGAGCTCCAGCACGTGCAGAGCTTCCTCGAGGAG
TACGATTTCGCCGGCCTCACTTCCATGGCAGAGGGCCTCAGCGATGGTGT
GCGCCTCTGCAAGCTCGCCGAGGTGGTCAGCAAGCCTGGCAAGGGCAGCC
TCTTCGACCAGCTGCGAACGCCGCCGAGCTCTGTGAGCTCGAAGCTCCAC
AACGTTGGTGTCGGCCTCAAGCACCTCCAGGAGTCT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig76828:26..811-

>mRNA_M-pyrifera_M_contig76828.18100.1 ID=mRNA_M-pyrifera_M_contig76828.18100.1|Name=mRNA_M-pyrifera_M_contig76828.18100.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1524bp|location=Sequence derived from alignment at M-pyrifera_M_contig76828:26..811- (Macrocystis pyrifera P11B4 male)
ATGGGCAAGAGGCTGATGGCTGCCGCCAAGAGCCTCGTGAAGAAGGTCTC
TCTTGCGTGCTACTCACGCAAGGTGACCATCAGGCATGATGTTGACCTCT
ACATCGACGTCGGCCAGCGCAAGGCTGCTATCGACCTCCTCCTCGATTCC
TACAACCACTCGTGGCTCGCATTCGGCCTGGGGGCGGTGTACAACTGTAC
GATCGTCGCCAGCTCGAGTGATCTCCGCCAGGCCCTCGCCTCTGCCATCT
CGGCAAAGATGTTGCGCAACGCTGAGATTTCTCAATCATACGAGACGCCC
AGTGGCCTCCTCAAGGACGGATGCAAGGAAGAGCTGGATGCGTTCCGCCT
GCAGCAATTCCTCACTCTCTTCTGGGTGCTGGACACGGCCAAGTACAAGA
ACGTCTTCGGCGTGCGCACGGCGTGCCTCTTCAACAAGGATGCCAAGGCA
AAGAGCAGTGTTCGTGTCCTCGCCCAGTTCATTGCCCTCTGTGTGGCCGA
GGAGAGCATTGCGACGAGCCGCACCCTCTCAGCCATTGGCTACGAGCTCC
AGCACGTGCAGAGCTTCCTCGAGGAGTACGATTTCGCCGGCCTCACTTCC
ATGGCAGAGGGCCTCAGCGATGGTGTGCGCCTCTGCAAGCTCGCCGAGGT
GGTCAGCAAGCCTGGCAAGGGCAGCCTCTTCGACCAGCTGCGAACGCCGC
CGAGCTCTGTGAGCTCGAAGCTCCACAACGTTGGTGTCGGCCTCAAGCAC
CTCCAGGAGTCTATGGGCAAGAGGCTGATGGCTGCCGCCAAGAGCCTCGT
GAAGAAGGTCTCTCTTGCGTGCTACTCACGCAAGGTGACCATCAGGCATG
ATGTTGACCTCTACATCGACGTCGGCCAGCGCAAGGCTGCTATCGACCTC
CTCCTCGATTCCTACAACCACTCGTGGCTCGCATTCGGCCTGGGGGCGGT
GTACAACTGTACGATCGTCGCCAGCTCGAGTGATCTCCGCCAGGCCCTCG
CCTCTGCCATCTCGGCAAAGATGTTGCGCAACGCTGAGATTTCTCAATCA
TACGAGACGCCCAGTGGCCTCCTCAAGGACGGATGCAAGGAAGAGCTGGA
TGCGTTCCGCCTGCAGCAATTCCTCACTCTCTTCTGGGTGCTGGACACGG
CCAAGTACAAGAACGTCTTCGGCGTGCGCACGGCGTGCCTCTTCAACAAG
GATGCCAAGGCAAAGAGCAGTGTTCGTGTCCTCGCCCAGTTCATTGCCCT
CTGTGTGGCCGAGGAGAGCATTGCGACGAGCCGCACCCTCTCAGCCATTG
GCTACGAGCTCCAGCACGTGCAGAGCTTCCTCGAGGAGTACGATTTCGCC
GGCCTCACTTCCATGGCAGAGGGCCTCAGCGATGGTGTGCGCCTCTGCAA
GCTCGCCGAGGTGGTCAGCAAGCCTGGCAAGGGCAGCCTCTTCGACCAGC
TGCGAACGCCGCCGAGCTCTGTGAGCTCGAAGCTCCACAACGTTGGTGTC
GGCCTCAAGCACCTCCAGGAGTCT
back to top