mRNA_M-pyrifera_M_contig76742.18088.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76742.18088.1
Unique NamemRNA_M-pyrifera_M_contig76742.18088.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A1J7IU09_9PEZI (Phosphopantothenate-cysteine ligase-like protein n=1 Tax=Coniochaeta ligniaria NRRL 30616 TaxID=1408157 RepID=A0A1J7IU09_9PEZI)

HSP 1 Score: 90.5 bits (223), Expect = 9.520e-20
Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 1 
Query:    1 ACSPEEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            A   E+H+F+S  PP+GLE H + +R F+ +  A GR VVL++SGGTTV LE+ TVRF+DNFS GTRGA  AEY
Sbjct:   10 AAKVEQHYFQSNPPPKGLEEHTSLVRDFISQHQATGRKVVLVSSGGTTVPLEKQTVRFIDNFSAGTRGATSAEY 83
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: G2WW25_VERDV (Phosphopantothenate-cysteine ligase n=1 Tax=Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137) TaxID=498257 RepID=G2WW25_VERDV)

HSP 1 Score: 84.3 bits (207), Expect = 1.890e-18
Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F +  PP+ L  H A    F+  Q    RPVVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:    8 EDHYFSANPPPKALARHVAQASAFLDHQVVSNRPVVLITSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 77
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A420YC54_9PEZI (DFP domain-containing protein n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420YC54_9PEZI)

HSP 1 Score: 86.3 bits (212), Expect = 3.350e-18
Identity = 45/74 (60.81%), Postives = 52/74 (70.27%), Query Frame = 1 
Query:    1 ACSPEEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            A   EE +F S  PP+GLE H A  R F+ E  A G  VVL++SGGTTV LE+NTVRF+DNFS GTRGA  AEY
Sbjct:    7 ASMAEELYFNSHPPPKGLEHHTALARDFIAEHSAKGTRVVLVSSGGTTVPLEKNTVRFIDNFSAGTRGATSAEY 80
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A6G1NNT9_VERDA (DFP domain-containing protein n=1 Tax=Verticillium dahliae VDG1 TaxID=1027910 RepID=A0A6G1NNT9_VERDA)

HSP 1 Score: 85.9 bits (211), Expect = 3.570e-18
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F +  PP+ L  H A    F+  Q A  RPVVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:    8 EDHYFSANPPPKALARHVAQASAFLDHQVASNRPVVLITSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 77
[Close]
BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A8K0X1R1_9PEZI (DNA/pantothenate metabolism flavoprotein n=1 Tax=Plectosphaerella cucumerina TaxID=40658 RepID=A0A8K0X1R1_9PEZI)

HSP 1 Score: 85.9 bits (211), Expect = 4.090e-18
Identity = 43/70 (61.43%), Postives = 51/70 (72.86%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F S  PP+ L  H +  R F+ +  A GR VVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:   11 EDHYFSSNPPPKTLPHHESLARVFIAQHAAAGRRVVLVTSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 80
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: C9SB79_VERA1 (Phosphopantothenate-cysteine ligase n=1 Tax=Verticillium alfalfae (strain VaMs.102 / ATCC MYA-4576 / FGSC 10136) TaxID=526221 RepID=C9SB79_VERA1)

HSP 1 Score: 85.5 bits (210), Expect = 4.160e-18
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F +  PP+ L  H A    F+  Q A  RPVVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:    8 EDHYFSANPPPKALARHVAQASAFLDHQVASDRPVVLITSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 77
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A3N2PSS4_9PEZI (DFP-domain-containing protein n=1 Tax=Sodiomyces alkalinus F11 TaxID=1314773 RepID=A0A3N2PSS4_9PEZI)

HSP 1 Score: 85.5 bits (210), Expect = 5.840e-18
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F S  PP+ L  H A  R F+ +  A  R VVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:   10 EDHYFSSNPPPKALAHHEAQARDFISQHAAAKRRVVLITSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 79
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BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A3M9Y8S4_9PEZI (DFP domain-containing protein n=7 Tax=Verticillium TaxID=1036719 RepID=A0A3M9Y8S4_9PEZI)

HSP 1 Score: 85.5 bits (210), Expect = 6.730e-18
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F +  PP+ L  H A    F+  Q A  RPVVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:    8 EDHYFSANPPPKALARHVAQASAFLDHQVASDRPVVLITSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 77
[Close]
BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: A0A0G4KX79_9PEZI (MFS domain-containing protein n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4KX79_9PEZI)

HSP 1 Score: 85.9 bits (211), Expect = 6.890e-18
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E+H+F +  PP+ L  H A    F+  Q A  RPVVL+TSGGTTV LERNTVRF+DNFS GTRGA  AEY
Sbjct:  497 EDHYFSANPPPKALARHVAQASAFLDHQVASNRPVVLITSGGTTVPLERNTVRFIDNFSAGTRGATSAEY 566
[Close]
BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Match: M7TC69_EUTLA (Putative phosphopantothenate-cysteine ligase protein n=1 Tax=Eutypa lata (strain UCR-EL1) TaxID=1287681 RepID=M7TC69_EUTLA)

HSP 1 Score: 85.5 bits (210), Expect = 7.800e-18
Identity = 43/70 (61.43%), Postives = 50/70 (71.43%), Query Frame = 1 
Query:   13 EEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVRLERNTVRFLDNFSTGTRGALCAEY 222
            E  +F S  PP+ L  H AA   F+R+  A GR VVL+TSGGTTV LE+NTVRF+DNFS GTRGA  AEY
Sbjct:   20 ENAYFSSNPPPKALPQHTAAAEAFIRQHAASGRRVVLITSGGTTVPLEKNTVRFIDNFSAGTRGATSAEY 89
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76742.18088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1J7IU09_9PEZI9.520e-2058.11Phosphopantothenate-cysteine ligase-like protein n... [more]
G2WW25_VERDV1.890e-1860.00Phosphopantothenate-cysteine ligase n=1 Tax=Vertic... [more]
A0A420YC54_9PEZI3.350e-1860.81DFP domain-containing protein n=1 Tax=Coniochaeta ... [more]
A0A6G1NNT9_VERDA3.570e-1861.43DFP domain-containing protein n=1 Tax=Verticillium... [more]
A0A8K0X1R1_9PEZI4.090e-1861.43DNA/pantothenate metabolism flavoprotein n=1 Tax=P... [more]
C9SB79_VERA14.160e-1861.43Phosphopantothenate-cysteine ligase n=1 Tax=Vertic... [more]
A0A3N2PSS4_9PEZI5.840e-1861.43DFP-domain-containing protein n=1 Tax=Sodiomyces a... [more]
A0A3M9Y8S4_9PEZI6.730e-1861.43DFP domain-containing protein n=7 Tax=Verticillium... [more]
A0A0G4KX79_9PEZI6.890e-1861.43MFS domain-containing protein n=1 Tax=Verticillium... [more]
M7TC69_EUTLA7.800e-1861.43Putative phosphopantothenate-cysteine ligase prote... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76742contigM-pyrifera_M_contig76742:350..821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.4
Seed ortholog evalue3e-15
Seed eggNOG ortholog1051613.XP_003007550.1
Preferred namePPCS
KEGG rclassRC00064,RC00090
KEGG koko:K01922,ko:K11237
KEGG ReactionR04230
KEGG Pathwayko00770,ko01100,ko04011,map00770,map01100,map04011
KEGG ModuleM00120
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0000904,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004632,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006084,GO:0006085,GO:0006139,GO:0006163,GO:0006164,GO:0006575,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007297,GO:0007300,GO:0007303,GO:0007304,GO:0007306,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010631,GO:0010927,GO:0015936,GO:0015937,GO:0015939,GO:0016043,GO:0016333,GO:0016477,GO:0016482,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0022416,GO:0022607,GO:0030029,GO:0030036,GO:0030154,GO:0030703,GO:0030707,GO:0030708,GO:0030713,GO:0030855,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032989,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035383,GO:0035384,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046843,GO:0046907,GO:0048138,GO:0048139,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048646,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0050801,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055081,GO:0055086,GO:0055088,GO:0055090,GO:0055091,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070328,GO:0071616,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0090130,GO:0090132,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1990143,GO:1990181
EggNOG free text desc.phosphopantothenate--cysteine ligase activity
EggNOG OGsCOG0452@1,KOG2728@2759
EC6.3.2.51
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons2
Model size222
Cds size222
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816667.0429144-CDS-M-pyrifera_M_contig76742:349..3971622816667.0429144-CDS-M-pyrifera_M_contig76742:349..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76742 350..397 +
1692278107.8443055-CDS-M-pyrifera_M_contig76742:349..3971692278107.8443055-CDS-M-pyrifera_M_contig76742:349..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76742 350..397 +
1622816667.0554683-CDS-M-pyrifera_M_contig76742:647..8211622816667.0554683-CDS-M-pyrifera_M_contig76742:647..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76742 648..821 +
1692278107.8600328-CDS-M-pyrifera_M_contig76742:647..8211692278107.8600328-CDS-M-pyrifera_M_contig76742:647..821Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76742 648..821 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76742.18088.1prot_M-pyrifera_M_contig76742.18088.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76742 350..821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76742.18088.1

>prot_M-pyrifera_M_contig76742.18088.1 ID=prot_M-pyrifera_M_contig76742.18088.1|Name=mRNA_M-pyrifera_M_contig76742.18088.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=74bp
ACSPEEHFFESEDPPEGLETHGAAMRRFVREQHALGRPVVLLTSGGTTVR
LERNTVRFLDNFSTGTRGALCAEY
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mRNA from alignment at M-pyrifera_M_contig76742:350..821+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76742.18088.1 ID=mRNA_M-pyrifera_M_contig76742.18088.1|Name=mRNA_M-pyrifera_M_contig76742.18088.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=472bp|location=Sequence derived from alignment at M-pyrifera_M_contig76742:350..821+ (Macrocystis pyrifera P11B4 male)
GCTTGCAGCCCAGAAGAGCACTTCTTTGAATCAGAAGACCCCCCAGAAGT
ATGAGATATTGCTTTGTAGGATGGGTTGGAGTGAGTATAGGTGTGGGAAA
GGGGTAGTGGGGGGTGGAGAAGGGGAAGATTGGATGCGTTGTCGCTTTCA
TAGGGATCGATGAGTGTAATACGGTCAATCTTCGGATAGTTGAATTATTT
GGAGCATGTAATATTGATTACACCAAAACTCAATCCTCCCTCTACTCCTC
TTTGCTCTCAAAACGCCAACATCCCCCTTTTCTTTCTCTTTTGGGCAGGG
ATTGGAGACACATGGGGCTGCGATGCGGCGCTTTGTCCGCGAGCAGCACG
CTCTGGGAAGACCTGTGGTGCTGCTGACGTCAGGAGGAACCACGGTGCGT
TTGGAACGAAACACTGTCCGTTTCCTCGACAACTTCTCCACAGGAACCAG
AGGCGCTCTTTGTGCAGAGTAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76742:350..821+

>mRNA_M-pyrifera_M_contig76742.18088.1 ID=mRNA_M-pyrifera_M_contig76742.18088.1|Name=mRNA_M-pyrifera_M_contig76742.18088.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig76742:350..821+ (Macrocystis pyrifera P11B4 male)
GCTTGCAGCCCAGAAGAGCACTTCTTTGAATCAGAAGACCCCCCAGAAGC
TTGCAGCCCAGAAGAGCACTTCTTTGAATCAGAAGACCCCCCAGAAGGAT
TGGAGACACATGGGGCTGCGATGCGGCGCTTTGTCCGCGAGCAGCACGCT
CTGGGAAGACCTGTGGTGCTGCTGACGTCAGGAGGAACCACGGTGCGTTT
GGAACGAAACACTGTCCGTTTCCTCGACAACTTCTCCACAGGAACCAGAG
GCGCTCTTTGTGCAGAGTATGGATTGGAGACACATGGGGCTGCGATGCGG
CGCTTTGTCCGCGAGCAGCACGCTCTGGGAAGACCTGTGGTGCTGCTGAC
GTCAGGAGGAACCACGGTGCGTTTGGAACGAAACACTGTCCGTTTCCTCG
ACAACTTCTCCACAGGAACCAGAGGCGCTCTTTGTGCAGAGTAT
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