mRNA_M-pyrifera_M_contig76612.18057.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76612.18057.1
Unique NamemRNA_M-pyrifera_M_contig76612.18057.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A5A8CDK2_CAFRO (Phosphoinositide phospholipase C n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDK2_CAFRO)

HSP 1 Score: 206 bits (523), Expect = 1.350e-57
Identity = 153/280 (54.64%), Postives = 171/280 (61.07%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPPNPRPAQYPSPAELQRKVVIRDKPGAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPL------------HPDLLALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGAR---NGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            GGTLT KLPFR AV AVA YAFR  N+ PS  PVILTLENHCS + Q +QA IL EEL DLL++PP  RPA YPSP  ++ KV+IRDKPG  L YA  S                 XXXXXXXXXXXXXXXXXXXXXXXXXX                     HPDL+AL+AVPN+KFR    L   Y PGPASSSFSE      A GA+   +   I   A  HL+RVYP G+RVDSSN+ P   W  G QL A+NYQ  D  V   Q+ F  NGGCGY
Sbjct:  347 GGTLTGKLPFREAVRAVAEYAFRPENVIPSDAPVILTLENHCSKSGQSVQAAILREELGDLLHVPPAERPAVYPSPESMRGKVLIRDKPGRPLEYAGASEAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPDLMALVAVPNMKFRGFHKLAS-YCPGPASSSFSEDLMAAAAKGAKLKGSPSSIAELAKTHLLRVYPKGVRVDSSNFSPGRFWALGCQLAALNYQYGDRSVHTNQAFFSQNGGCGY 625          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A812YZS3_9DINO (Phosphoinositide phospholipase C n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YZS3_9DINO)

HSP 1 Score: 195 bits (495), Expect = 7.800e-55
Identity = 119/273 (43.59%), Postives = 147/273 (53.85%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPPNPRPAQYPSPAELQRKVVIRDKP------GAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRR--KSPLHPDLLALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            GGT+TS L F+ A+ A+A YAFR  N+RPST PVI+T+ENHCS   Q  QA+IL E L DLLY+P     A+YP+  EL  KV+IRDKP      GA    A ++             ++                               ++  K  +HPDLLAL+ VPNVKF  LD L       P SSSF+E K  K A   R+   +L Y  +HL+R YP G RVDSSNYDP  AW  GAQ+VA+N+Q D   VWK    F  NGGCGY
Sbjct:  152 GGTMTSSLDFQEAIQAIAEYAFRPTNIRPSTCPVIITMENHCSFDMQGEQARILREVLGDLLYVPAAEPRAEYPTLGELMGKVIIRDKPKKSVPPGASAEGAQDARAALVAMAETVDEMAEEAGEEDSVAGSSAAGMERPDSARSDATTASQKELKKLMHPDLLALVTVPNVKFPGLDKLSTL--TFPTSSSFNEDKVEKYAK--RDPAGLLAYTQRHLMRTYPRGTRVDSSNYDPQTAWGVGAQVVALNFQHDSLPVWKCMGFFTANGGCGY 420          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A2R5GVY5_9STRA (Phosphoinositide phospholipase C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVY5_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.660e-30
Identity = 103/293 (35.15%), Postives = 136/293 (46.42%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPPNPR-----------PAQYPSPAELQRKVVIRDKP------------GAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLLALIAVPNVKFR-----SLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            G T+   +P R  + A+   AF       S +PVI+T+ENHCS   Q++Q  +L     D L+  P              P  + SP +L+ K+VIRDKP            GA    AT +S     ++  P    +                    XXXXXXX    +   +   LL ++ + NVK +     +   +  +  P  +SSS  E K  KL        D+  YA +HLVRVYPAG RVDSSNYDP  AWN G QLVA+NYQ +   VW  Q  F DNGGCGY
Sbjct:  263 GHTMCKPVPMRECLKAIKECAFEA-----SEYPVIITIENHCSLPQQKVQVDMLKSTFGDHLFQWPGHDDGSGKPDWTRGPDCWLSPEDLKGKIVIRDKPIKVKQNAKRASDGATEGIATVASDVGNSKL--PEAPENTVVEPSSDIMSLSSLALNDEXXXXXXXVDTAKSLGVDDQLLKVMYIKNVKLKFTHEKASQRVDFKEPPFASSSSIVEGKMHKLTKAGYPMRDLCEYAQRHLVRVYPAGSRVDSSNYDPVSAWNAGCQLVALNYQTNSLPVWLNQGRFSDNGGCGY 548          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A7S2RWD9_9STRA (Phosphoinositide phospholipase C n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RWD9_9STRA)

HSP 1 Score: 128 bits (321), Expect = 6.380e-30
Identity = 105/252 (41.67%), Postives = 133/252 (52.78%), Query Frame = 1
Query:   88 STFPVILTLENHCSTASQQIQAKILHEELKDLLY-----------IPPNPRPAQYPSPAELQRKVVIRDKPGAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLLALIAVPNVKFRSLDALGDEYSPGP-----ASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            S +PV++T+ENHCS   Q+ Q ++L +   + LY           +     PA++ SP +L+ KVVIRDKP        + SG    +    SP +SP    XXXXXXXXXXXXXXX       G       +   LL L+ + NVK +      D     P     +SSS  E+K +KL        DI  YA +HLVR+YP G RVDSSNYDP  AWN G Q+VA+NYQ     VW  Q  F DNGGCGY
Sbjct:  285 SQYPVVITIENHCSLPQQKTQGEMLKKVFGNKLYFWDGKDLGDGKVDWASGPAEWKSPEDLKGKVVIRDKP-VKKKSDKKKSGRNLEK----SPSTSPTSSEXXXXXXXXXXXXXXXVDYVEHLG-------VDEQLLRLMYIKNVKLKPEVVKEDAKVKFPEPEYRSSSSLVESKMLKLTKPGFYARDISTYAQRHLVRIYPGGSRVDSSNYDPTPAWNAGCQVVALNYQTFTLPVWLNQGRFSDNGGCGY 524          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A813HN68_POLGL (Phosphoinositide phospholipase C n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HN68_POLGL)

HSP 1 Score: 125 bits (315), Expect = 3.520e-29
Identity = 96/296 (32.43%), Postives = 137/296 (46.28%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPPNPR-PAQYPSPAELQRKVVIRDKPGAFLNYATES-SGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGG------------------------VRRKSPLHPDLLALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILR-YATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQAD----DWGVWKGQSMFLDNGGCGY 795
            GGT+T  +PF+  + A+   AF       S  PVI+TLENH     Q+  A +L  EL D L++P  P  P+++PSPAEL+R+ ++RDK       A E+ SG       V SP  +                                                     +R++     +L  LI++ N+K   ++  G   +    SSS SE +  K+   A++G+D+LR Y   H+VRV+PAG R+DSSNYDP  AW  G Q+VA+NYQ+         W     F  NGGCGY
Sbjct:  187 GGTMTDVVPFQDCLRAIRDAAFET-----SDAPVIITLENHTKEQGQRQCAALLRSELGDALFVPSVPGLPSKWPSPAELRRRFLLRDKIYEICGEAEENESGLEEGMEQVASPTKTKTRWSRIGALEKLLSRGGGFSPTAGAPHSPLSPQPTSSRMQTLPRSCAVEAQELRKRPSKAKELHDLISIGNMKLLGIEDAGKWMAC--TSSSISELRLAKMV--AKDGLDVLRAYTAVHIVRVFPAGYRLDSSNYDPQDAWEAGCQMVALNYQSSVLFHPHSAWLNAGKFRGNGGCGY 473          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A0D2U0B6_CAPO3 (Phosphoinositide phospholipase C n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U0B6_CAPO3)

HSP 1 Score: 125 bits (313), Expect = 9.340e-29
Identity = 104/268 (38.81%), Postives = 135/268 (50.37%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEEL-KDLLYIPPNPRPAQYPSPAELQRKVVIRDKPGAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLLALIAVPN-VKFRSLDALGDEYSPGP--ASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCG 792
            G TLTSK+ F   + A+  YAF       S FPVIL++ENHCS   Q++ A+ +   L   LL   P+     YPSP +L+ K++I+ K       A   +G          P    XXXXXXXXX                    ++K  L P+L AL+     V F+S D   D  + G     SSF+EAK  K AS   +   ++ Y  K L R+YPAG RVDSSNYDP VAWNCG+Q+VA+NYQ  D  +   Q  F  NG  G
Sbjct:  500 GHTLTSKIKFSDVIKAIGDYAFAT-----SPFPVILSIENHCSVPQQKVMAQHMETILGSKLLKGDPDELRKAYPSPNDLKNKILIKGKRSGKTGMAAGPAG----------PADXXXXXXXXXXXEGKVKDEAAVQAAAAIKAKNQKKVTLAPELSALVVYCKAVHFKSFD---DSAANGKYWEMSSFAEAKTKKFASKLPS--QLIEYNKKQLSRIYPAGTRVDSSNYDPQVAWNCGSQIVALNYQTPDRSMQLNQGKFRQNGRSG 747          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A7S1YYK4_9STRA (Phosphoinositide phospholipase C n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YYK4_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.330e-28
Identity = 112/265 (42.26%), Postives = 149/265 (56.23%), Query Frame = 1
Query:    7 TLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPPNPR-PAQYPSPAELQRKVVIRDKPGAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLLALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILR-YATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            TLTSK+ F + +  V GY     +  P+T+P+IL+LENHCS   Q++ AK+L E L  LLY+P         PSP  L+ KVVI+ K                     P P  +PXXXXXXXXXXXXXXXXXXXXXXXXXX  V+    + P L  L  +    ++S +    +  P  +  S  E+K  K+   +   V + R Y   HL R YPAG+RV+SSNY+P +AW+ G QLVA+N+Q +D  +      F +NGGCGY
Sbjct:    2 TLTSKITFSSIIRCVKGYM----DSDPNTYPMILSLENHCSHPFQEVMAKVLKETLGHLLYVPDKETLDKDLPSPEALRGKVVIKGK-------------------RPPEPDDAPXXXXXXXXXXXXXXXXXXXXXXXXXXXKVK----VLPVLANLTLLNGTHYKSFEI--SKTIPPSSMHSIGESKITKILDKSSANVPLWREYNVNHLTRTYPAGVRVNSSNYNPTLAWSVGCQLVALNFQTNDSNMLMNDGRFKENGGCGY 237          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A8B8AEU1_CRAVI (Phosphoinositide phospholipase C n=8 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AEU1_CRAVI)

HSP 1 Score: 123 bits (308), Expect = 4.050e-28
Identity = 87/270 (32.22%), Postives = 125/270 (46.30%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPST-FPVILTLENHCSTASQQIQAKILHEELKDLLYIPPNPRPAQYPSPAELQRKVVIRDKPGAFLNYATE----SSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLLALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            G TLTSK+ FR  ++A+  YAF+   L P+  +PVIL++ENHCS   Q + A  +     DLLY P  P P + PSP +L  K++I+ +    +N   +     S     EVS     +                                 K  L P+    +    V F+ ++   +  +      S  E+K +KL    R GV  ++     LVR YPAG R DSSNY+P   WN G Q+VA+N+Q     +   Q+ F+DNGGCGY
Sbjct:  376 GYTLTSKILFRDVLSAIKDYAFQSSPLNPNNRYPVILSIENHCSVRQQTVMATYIKSIFGDLLYAPEEP-PNRIPSPHDLMGKIIIKSEKFCPVNSGKKLPRGHSSGDDGEVSDEDEAAD----------------VASNNVVKPSNANTDHKIKLSPEFSDCVGFKAVSFKGIE---ESINSNGMFVSLGESKALKLIENNRAGV--IKMNQHMLVRTYPAGSRTDSSNYNPLPMWNAGCQVVALNFQTASEPMQLLQAKFMDNGGCGY 623          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A6J1V4G2_9SAUR (Phosphoinositide phospholipase C n=2 Tax=Colubroidea TaxID=34989 RepID=A0A6J1V4G2_9SAUR)

HSP 1 Score: 122 bits (306), Expect = 7.350e-28
Identity = 99/267 (37.08%), Postives = 139/267 (52.06%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPP-NPRPAQYPSPAELQRKVVIRDKPGAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLL-ALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGVWKGQSMFLDNGGCGY 795
            G T TSK+ FR A+ A+  YAF+      S +PVI++LENHCS   Q+  A+ LH  LKD L + P +P+  + PSP +L+ K++++   G  L   TE       EVS     +  XXXXXXXX                    +  K  L  +L   +I   +V F+       E  P     SFSE K +K+A    + +D++ Y  +HL R+YPAG R DSSNY+P   WN G Q+VA+N+Q+    +   Q  F +NGGCGY
Sbjct:  379 GYTFTSKILFRDAIKAIKNYAFKI-----SPYPVIISLENHCSVDQQETMARHLHSILKDALLVAPIDPKGTKLPSPEQLKGKILVK---GKKLTPETE-------EVSDEDEAAXXXXXXXXXXVEKKK---------------LSDKLKLAKELSDTVIYCKSVHFQGFA----ESQPPDEMCSFSEGKILKVAQ--ESAIDLVHYNVQHLSRIYPAGWRTDSSNYNPVEMWNMGCQIVALNFQSRCSEMDIHQGRFQENGGCGY 609          
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Match: A0A670ZXM8_PSETE (Phosphoinositide phospholipase C n=11 Tax=Colubroidea TaxID=34989 RepID=A0A670ZXM8_PSETE)

HSP 1 Score: 121 bits (304), Expect = 1.380e-27
Identity = 97/269 (36.06%), Postives = 139/269 (51.67%), Query Frame = 1
Query:    1 GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQAKILHEELKDLLYIPP-NPRPAQYPSPAELQRKVVIRDKPGAFLNYATESSGXXXXEVSVPSPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXGGVRRKSPLHPDLL-ALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNGVDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQA--DDWGVWKGQSMFLDNGGCGY 795
            G T TSK+ FR A+ A+  YAF+      S +PVI++LENHCS   Q++ A  LH  LKD L + P +P+  + PSP +L+ K++++   G  L   TE       EVS     +  XXXXX                       +  K  L  +L   +I   +V F+       E  P     SFSE K +K+A    + +D++ Y  +HL R+YPAG R DSSNY+P   WN G Q+VA+N+Q+   +  + +GQ  F +NGGCGY
Sbjct:  379 GYTFTSKILFRDAIKAIKNYAFKI-----SPYPVIISLENHCSIDQQKMMAHHLHSILKDTLLVAPIDPKGTKLPSPEQLKGKILVK---GKKLTPETE-------EVSDEDEAAXXXXXXXKSEVEKKK---------------LSDKLKLAKELSDTVIYCKSVHFQGFA----ESQPPDEMCSFSEGKILKVAQ--ESAIDLVHYNVQHLSRIYPAGWRTDSSNYNPVEMWNLGCQIVALNFQSRCSEMDIHQGQ--FQENGGCGY 609          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76612.18057.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CDK2_CAFRO1.350e-5754.64Phosphoinositide phospholipase C n=3 Tax=Cafeteria... [more]
A0A812YZS3_9DINO7.800e-5543.59Phosphoinositide phospholipase C n=1 Tax=Symbiodin... [more]
A0A2R5GVY5_9STRA2.660e-3035.15Phosphoinositide phospholipase C n=1 Tax=Hondaea f... [more]
A0A7S2RWD9_9STRA6.380e-3041.67Phosphoinositide phospholipase C n=1 Tax=labyrinth... [more]
A0A813HN68_POLGL3.520e-2932.43Phosphoinositide phospholipase C n=2 Tax=Polarella... [more]
A0A0D2U0B6_CAPO39.340e-2938.81Phosphoinositide phospholipase C n=1 Tax=Capsaspor... [more]
A0A7S1YYK4_9STRA2.330e-2842.26Phosphoinositide phospholipase C n=1 Tax=Ditylum b... [more]
A0A8B8AEU1_CRAVI4.050e-2832.22Phosphoinositide phospholipase C n=8 Tax=Crassostr... [more]
A0A6J1V4G2_9SAUR7.350e-2837.08Phosphoinositide phospholipase C n=2 Tax=Colubroid... [more]
A0A670ZXM8_PSETE1.380e-2736.06Phosphoinositide phospholipase C n=11 Tax=Colubroi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76612contigM-pyrifera_M_contig76612:3..1025 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score126.7
Seed ortholog evalue1.6e-26
Seed eggNOG ortholog192875.XP_004365118.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.C2 domain
EggNOG OGs38BAR@33154,COG5038@1,KOG0169@1,KOG0169@2759,KOG1012@2759
COG Functional cat.M
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons3
Model size795
Cds size795
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76612.18057.1prot_M-pyrifera_M_contig76612.18057.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76612 3..1025 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816665.3719332-CDS-M-pyrifera_M_contig76612:2..4291622816665.3719332-CDS-M-pyrifera_M_contig76612:2..429Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76612 3..429 +
1692278106.8679817-CDS-M-pyrifera_M_contig76612:2..4291692278106.8679817-CDS-M-pyrifera_M_contig76612:2..429Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76612 3..429 +
1622816665.3842247-CDS-M-pyrifera_M_contig76612:507..6661622816665.3842247-CDS-M-pyrifera_M_contig76612:507..666Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76612 508..666 +
1692278106.8792768-CDS-M-pyrifera_M_contig76612:507..6661692278106.8792768-CDS-M-pyrifera_M_contig76612:507..666Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76612 508..666 +
1622816665.3963115-CDS-M-pyrifera_M_contig76612:816..10251622816665.3963115-CDS-M-pyrifera_M_contig76612:816..1025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76612 817..1025 +
1692278106.8884432-CDS-M-pyrifera_M_contig76612:816..10251692278106.8884432-CDS-M-pyrifera_M_contig76612:816..1025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76612 817..1025 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76612.18057.1

>prot_M-pyrifera_M_contig76612.18057.1 ID=prot_M-pyrifera_M_contig76612.18057.1|Name=mRNA_M-pyrifera_M_contig76612.18057.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
GGTLTSKLPFRAAVAAVAGYAFRKRNLRPSTFPVILTLENHCSTASQQIQ
AKILHEELKDLLYIPPNPRPAQYPSPAELQRKVVIRDKPGAFLNYATESS
GGGGGEVSVPSPLSSPAIAAAGGGGGGEGDEEEEEEDEEEEEGGVRRKSP
LHPDLLALIAVPNVKFRSLDALGDEYSPGPASSSFSEAKFIKLASGARNG
VDILRYATKHLVRVYPAGMRVDSSNYDPCVAWNCGAQLVAMNYQADDWGV
WKGQSMFLDNGGCGY
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mRNA from alignment at M-pyrifera_M_contig76612:3..1025+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76612.18057.1 ID=mRNA_M-pyrifera_M_contig76612.18057.1|Name=mRNA_M-pyrifera_M_contig76612.18057.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1023bp|location=Sequence derived from alignment at M-pyrifera_M_contig76612:3..1025+ (Macrocystis pyrifera P11B4 male)
GGTGGGACTCTTACATCCAAGCTTCCATTTCGTGCTGCAGTTGCAGCTGT AGCGGGATATGCATTTCGAAAACGAAACTTGCGACCATCTACGTTCCCTG TAATTCTCACTCTGGAAAACCATTGTTCCACAGCATCGCAACAAATTCAA GCAAAGATTCTTCATGAGGAACTGAAAGATCTTTTATACATTCCACCAAA CCCACGTCCAGCACAATATCCATCACCAGCTGAACTCCAACGAAAAGTTG TCATTCGTGACAAACCAGGAGCATTCTTGAATTACGCAACAGAATCTAGT GGAGGAGGCGGAGGTGAAGTATCAGTGCCATCCCCACTCAGTTCGCCAGC AATTGCGGCTGCTGGAGGTGGTGGTGGAGGTGAAGGAGATGAGGAGGAGG AGGAGGAGGATGAGGAGGAGGAAGAAGGTGGGGTGGGTGAAGGTGGTAGT AGCAGTGGTAGTGGTGCAGCATCTGCAAAGAAACGAACCTTACCAACTCC ACCAGGGGGTGTACGTCGTAAATCGCCACTTCATCCTGATTTATTGGCTC TTATTGCAGTTCCAAATGTCAAGTTTCGTTCTTTGGATGCTCTTGGCGAT GAATACTCTCCTGGTCCTGCGAGTTCATCATTTTCAGAGGCAAAGTTTAT CAAACTGGCTTCTGGTGCAACACGTGGGAAGAAGGTGGAAGGTGGATCAT CTGGTAAACTTGTGGAGGACGAAGTAGAAGATGAAGTAGAGGATGAAGCG GGAGGGGGAAGTGGGAAGGGATCTGCTACGCCTTCGACCACAGTTTCAGT AGTAGGTAGAGAAGGTGCACGAAATGGAGTTGATATCCTTCGGTATGCAA CGAAACATTTGGTGCGCGTCTATCCTGCTGGAATGCGTGTAGATTCAAGT AATTATGATCCATGTGTTGCTTGGAATTGTGGCGCACAACTAGTTGCGAT GAACTACCAAGCAGATGATTGGGGTGTGTGGAAAGGACAGTCCATGTTCC TTGACAATGGTGGATGTGGGTAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76612:3..1025+

>mRNA_M-pyrifera_M_contig76612.18057.1 ID=mRNA_M-pyrifera_M_contig76612.18057.1|Name=mRNA_M-pyrifera_M_contig76612.18057.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig76612:3..1025+ (Macrocystis pyrifera P11B4 male)
GGTGGGACTCTTACATCCAAGCTTCCATTTCGTGCTGCAGTTGCAGCTGT
AGCGGGATATGCATTTCGAAAACGAAACTTGCGACCATCTACGTTCCCTG
TAATTCTCACTCTGGAAAACCATTGTTCCACAGCATCGCAACAAATTCAA
GCAAAGATTCTTCATGAGGAACTGAAAGATCTTTTATACATTCCACCAAA
CCCACGTCCAGCACAATATCCATCACCAGCTGAACTCCAACGAAAAGTTG
TCATTCGTGACAAACCAGGAGCATTCTTGAATTACGCAACAGAATCTAGT
GGAGGAGGCGGAGGTGAAGTATCAGTGCCATCCCCACTCAGTTCGCCAGC
AATTGCGGCTGCTGGAGGTGGTGGTGGAGGTGAAGGAGATGAGGAGGAGG
AGGAGGAGGATGAGGAGGAGGAAGAAGGGTGGGACTCTTACATCCAAGCT
TCCATTTCGTGCTGCAGTTGCAGCTGTAGCGGGATATGCATTTCGAAAAC
GAAACTTGCGACCATCTACGTTCCCTGTAATTCTCACTCTGGAAAACCAT
TGTTCCACAGCATCGCAACAAATTCAAGCAAAGATTCTTCATGAGGAACT
GAAAGATCTTTTATACATTCCACCAAACCCACGTCCAGCACAATATCCAT
CACCAGCTGAACTCCAACGAAAAGTTGTCATTCGTGACAAACCAGGAGCA
TTCTTGAATTACGCAACAGAATCTAGTGGAGGAGGCGGAGGTGAAGTATC
AGTGCCATCCCCACTCAGTTCGCCAGCAATTGCGGCTGCTGGAGGTGGTG
GTGGAGGTGAAGGAGATGAGGAGGAGGAGGAGGAGGATGAGGAGGAGGAA
GAAGGGGGTGTACGTCGTAAATCGCCACTTCATCCTGATTTATTGGCTCT
TATTGCAGTTCCAAATGTCAAGTTTCGTTCTTTGGATGCTCTTGGCGATG
AATACTCTCCTGGTCCTGCGAGTTCATCATTTTCAGAGGCAAAGTTTATC
AAACTGGCTTCTGGGGGTGTACGTCGTAAATCGCCACTTCATCCTGATTT
ATTGGCTCTTATTGCAGTTCCAAATGTCAAGTTTCGTTCTTTGGATGCTC
TTGGCGATGAATACTCTCCTGGTCCTGCGAGTTCATCATTTTCAGAGGCA
AAGTTTATCAAACTGGCTTCTGGTGCACGAAATGGAGTTGATATCCTTCG
GTATGCAACGAAACATTTGGTGCGCGTCTATCCTGCTGGAATGCGTGTAG
ATTCAAGTAATTATGATCCATGTGTTGCTTGGAATTGTGGCGCACAACTA
GTTGCGATGAACTACCAAGCAGATGATTGGGGTGTGTGGAAAGGACAGTC
CATGTTCCTTGACAATGGTGGATGTGGGTATGTGCACGAAATGGAGTTGA
TATCCTTCGGTATGCAACGAAACATTTGGTGCGCGTCTATCCTGCTGGAA
TGCGTGTAGATTCAAGTAATTATGATCCATGTGTTGCTTGGAATTGTGGC
GCACAACTAGTTGCGATGAACTACCAAGCAGATGATTGGGGTGTGTGGAA
AGGACAGTCCATGTTCCTTGACAATGGTGGATGTGGGTAT
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