mRNA_M-pyrifera_M_contig76610.18055.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76610.18055.1
Unique NamemRNA_M-pyrifera_M_contig76610.18055.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: D8LPP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPP2_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 3.390e-39
Identity = 85/212 (40.09%), Postives = 131/212 (61.79%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGTV---DHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAMRAAAKGS 627
            +E LE YL  C D + LL M+ +TH H   +    VP VL+++FDRV MLLWPRFK + D N+ S++ A+  ++ +     H   RR+A  +AS+L L   L+ +      + M+ ++L  LR EV +L+ R+A+ LP  K +V FL++ Y  VL V++ER+++ D+ A  E++     + FVEEEL E +KRLI+FV+ TEAAM +   G+
Sbjct:  280 IENLESYLSGCCDCIGLLLMIKITHAHSMVMQRRRVP-VLDSFFDRVNMLLWPRFKTIFDNNLKSVKAANPKRMGVIERHPHYVTRRYAHFAASLLALHSGLDDLAVGIGGEEMLLNDLGTLRVEVVQLVQRMAEQLPSNKLQVVFLINNYHEVLRVFQERRIISDETARFEELLVRQRDFFVEEELKEKYKRLISFVQLTEAAMSSGETGA 490          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A5D6XQN4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQN4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.350e-37
Identity = 93/218 (42.66%), Postives = 126/218 (57.80%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGT-VDH----------------MVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAA 603
            LE LE YL+ C+D+VALL M+ LTH     +    VP VL++YFDRV +LLWPRFK V D N+ S+R A   KL       H  VRR+AE +AS+L L     R G  VD                 MV HNL +LR EV  LL RLA+     K R  FL++ Y  VL++++ER++V D+ +  E++ +   E FVEEEL   + +LI FVR+ E++
Sbjct:  407 LENLENYLFTCYDAVALLLMVRLTHAQRLVMEKRRVP-VLDSYFDRVALLLWPRFKAVFDLNLQSVRAAKVKKLGAVDLHPHYVVRRYAEFAASVLSLSLYTQRGGAAVDDAAAVSSAQMHENGAGDMVLHNLAVLRDEVLALLARLAEQHKNAKDRCVFLVNNYDLVLSLFQERRIVSDETSRFEELLAAQRERFVEEELQTWYAKLIQFVRQNESS 623          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A5A8BY82_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BY82_CAFRO)

HSP 1 Score: 144 bits (362), Expect = 1.010e-36
Identity = 85/174 (48.85%), Postives = 110/174 (63.22%), Query Frame = 1
Query:  112 PVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGTV-DHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAMRAAAKGSG 630
            PV+E YFDRV M LWPR K  LDA+  S+R+ADAA+L   S A H A  R+AEL+AS+L L   L R+G   D M+RHN+ L+R E++ LLGRLA   P R+ RVAFL + YR   A+  ER+  +D+VAH    A+  AELF  E +  HF R++  V   EA M  AA  +G
Sbjct:  282 PVMEGYFDRVTMCLWPRLKASLDAHAGSLRRADAARLGAVSVAPHFAAVRYAELAASVLGLHRGLRRLGGFGDDMLRHNMALMRSELDALLGRLAARHPAREVRVAFLHNTYRRCAALLAERRAPEDEVAHFADAAAAQAELFAAEAVTAHFARMVALVNRCEADMVQAAAAAG 455          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A7S2BKB8_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKB8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.060e-36
Identity = 83/203 (40.89%), Postives = 126/203 (62.07%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGTV---DHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEA 600
            LE LE +L+ C D++ L+ M+ + H    ++    +P VL+++FDRV MLLWPR K VLDAN  SI  +   KL + +   H   RR+AE SASIL L G +  +G     + M+ +++  LR  +  LL R++  LP  K R+ FL++ Y  VL V+ ER++V ++ AHM+++ +T+  LFVEEEL   F RLI FV++ E+
Sbjct:  391 LESLENHLFTCWDAIGLILMIKIVHAQRMAMQRRRIP-VLDSFFDRVNMLLWPRLKVVLDANHRSIELSSPKKLGVHTNNPHYVTRRYAEFSASILSLQGGMESLGIAGGGEEMLMNDMAKLRDALLELLTRMSDELPDSKQRLVFLINNYDQVLQVFSERQIVSEESAHMDELLNTHRGLFVEEELESCFGRLIGFVKQRES 592          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A5A8DU27_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DU27_CAFRO)

HSP 1 Score: 144 bits (362), Expect = 5.500e-36
Identity = 85/174 (48.85%), Postives = 110/174 (63.22%), Query Frame = 1
Query:  112 PVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGTV-DHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAMRAAAKGSG 630
            PV+E YFDRV M LWPR K  LDA+  S+R+ADAA+L   S A H A  R+AEL+AS+L L   L R+G   D M+RHN+ L+R E++ LLGRLA   P R+ RVAFL + YR   A+  ER+  +D+VAH    A+  AELF  E +  HF R++  V   EA M  AA  +G
Sbjct:  711 PVMEGYFDRVTMCLWPRLKASLDAHAGSLRRADAARLGAVSVAPHFAAVRYAELAASVLGLHRGLRRLGGFGDDMLRHNMALMRSELDALLGRLAARHPAREVRVAFLHNTYRRCAALLAERRAPEDEVAHFADAAAAQAELFAAEAVTAHFARMVALVNRCEADMVQAAAAAG 884          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A2D4BD34_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD34_PYTIN)

HSP 1 Score: 140 bits (352), Expect = 9.260e-35
Identity = 88/233 (37.77%), Postives = 127/233 (54.51%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALN---RVGTVDH-------------------MVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAMRAAAKGSGS 633
            LE LE YL+ C+D++ LL M+ LTH     +    +P  L+A+FDRV +LLWPRFK V D NV+S++ A   KL       H  +RR+AE +AS+L L  +       G   H                   MV +NL  LR E+  LLGRLA+     K R  FL++ Y  V+  ++E++++ D+ A  E++ +T  E FVEEEL   + ++I FVR+ E A+     GSGS
Sbjct:  394 LENLENYLFTCYDAIGLLLMIRLTHAQRVVMEKRRIP-CLDAFFDRVTLLLWPRFKAVFDLNVMSVKNAKVKKLGAIDLHPHYVIRRYAEFAASVLSLSHSTQPPQHSGPAGHDREITTMSSVHMQENGAGEMVLNNLAQLREEIRALLGRLAEQHKTSKERCVFLINNYDLVITQFQEKRIISDETAKFEELLATQRERFVEEELMTWYGKMIQFVRQNEGAVLGKT-GSGS 624          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A7S1CPF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPF8_9STRA)

HSP 1 Score: 135 bits (340), Expect = 9.360e-35
Identity = 83/202 (41.09%), Postives = 115/202 (56.93%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGTVDHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVD-DDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAA 603
            LE +E YL+ C+D  ALL M+H+TH H   + +  VP VL++YFDRV MLLWPRFK V D N+ S+R A+  ++       H   RR+ E SA++  L  +L   G  D M+ HN+ LLR E   LL R++        R  FL++ Y  V ++ +ER+L   D+ A  +        LFVEE L E F RLI FV++ E A
Sbjct:  127 LENVENYLFGCYDGTALLLMIHVTHDHRMLMQSRRVP-VLDSYFDRVNMLLWPRFKVVFDMNMESVRAANPKRMGAIELQPHFVSRRYGEFSATVQTLHRSLQSRGMSDDMLMHNMTLLRDETVSLLERMSVEHATAMARAVFLVNNYDAVCSLLEERRLSGTDEFAFFDDRLKRQVGLFVEEVLREPFGRLIVFVKQAERA 327          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: B8BSU0_THAPS (Suppressor of actin mutations protein-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSU0_THAPS)

HSP 1 Score: 136 bits (342), Expect = 1.670e-33
Identity = 76/202 (37.62%), Postives = 122/202 (60.40%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLGALNRVGTVDHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAM 606
            LE LE YL++CHD++A+L M+ LTH +  +V A  +  VLE + DR+  LLWPR K V+DA++ SIR A+A K+       H   RR+AE + S+LL+L         +HM+ ++L ++  E+  LL RLA      K R+ F+++    ++ ++KER++   ++    ++     ELFVEEEL + F ++I FV++TE  M
Sbjct:  355 LEQLETYLFNCHDAIAILLMIKLTHSYKRTVKARHIDKVLEPFLDRMTNLLWPRLKMVMDAHLRSIRGANAKKVGAGDIHPHLVSRRYAEFTCSVLLIL---------NHMLMNDLDVMVEEMVLLLKRLADVHTSNKKRIVFMINNLDQIITIFKERRVAGKELNRFTELLVQQRELFVEEELLQTFSKMIAFVQQTECHM 547          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: A0A8K1CGV2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGV2_PYTOL)

HSP 1 Score: 135 bits (341), Expect = 2.900e-33
Identity = 85/221 (38.46%), Postives = 125/221 (56.56%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLL----GALNRVGTVDH---------------MVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAM 606
            LE LE YL+ C+D++ LL M+ LTH     +    +P  L++YFDRV +LLWPRFK V D N++S+R A A KL       H  +RR+A+ +AS+L L      A    G  D                MV +NL LLR E+  LL RLA+     K R  FL++ Y  VL+ ++E+++V D+ +  E++ ++  E FVEEEL   + ++I FVR+ E A+
Sbjct:  400 LENLENYLFTCYDAIGLLLMIRLTHAQRLVMEKRRIP-CLDSYFDRVTLLLWPRFKAVFDLNLMSVRNAKAKKLGAIDLHPHYVIRRYADFTASVLSLSLYTQQATTGTGADDETVVSSAQMHENGAGDMVLNNLALLREEILALLNRLAEQHRSSKDRCVFLVNNYDLVLSHFQEKRIVSDESSKFEELLASQREKFVEEELITWYGKMILFVRQNEGAV 619          
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Match: K3WUL5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL5_GLOUD)

HSP 1 Score: 135 bits (340), Expect = 4.000e-33
Identity = 83/228 (36.40%), Postives = 129/228 (56.58%), Query Frame = 1
Query:    1 LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMMLLWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLL------------------GALNRVGTVDHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRGVLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEAAMRAAAKGSG 630
            LE LE YL+ C+D++ LL M+ LT+     +    +P VL+++FDRV +LLWPRFK V D N++S++ A   KL +     H  +RR+AE +AS+L L                     ++  G  D MV +NL +LR E+  LL RLA+     K +  FL++ Y  VL++++ER+++ ++ A  E++ +   E FVEEEL   + +LI FVR  E+     + GSG
Sbjct:  409 LENLENYLFTCYDAIGLLLMIRLTYAQRLVMEKRRIP-VLDSFFDRVTLLLWPRFKAVFDLNLMSVKNAKVKKLGVIDLHPHYVIRRYAEFAASVLSLSMYTQQHQSREGDDVSISSAQMHENGAGD-MVLNNLAVLRDEILSLLVRLAEQHKNSKDKCVFLVNNYDLVLSLFQERRIISEETAKFEELLAEQREKFVEEELVTWYAKLIQFVRHNESVTLGRSTGSG 634          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76610.18055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPP2_ECTSI3.390e-3940.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A5D6XQN4_9STRA4.350e-3742.66Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A5A8BY82_CAFRO1.010e-3648.85Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A7S2BKB8_9STRA2.060e-3640.89Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A5A8DU27_CAFRO5.500e-3648.85Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A2D4BD34_PYTIN9.260e-3537.77Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A7S1CPF8_9STRA9.360e-3541.09Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
B8BSU0_THAPS1.670e-3337.62Suppressor of actin mutations protein-like protein... [more]
A0A8K1CGV2_PYTOL2.900e-3338.46Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WUL5_GLOUD4.000e-3336.40Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76610contigM-pyrifera_M_contig76610:183..1025 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score151.0
Seed ortholog evalue6.3e-34
Seed eggNOG ortholog2880.D8LPP2
Preferred nameVPS52
KEGG koko:K17275,ko:K20298
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000138,GO:0000139,GO:0000149,GO:0000902,GO:0000904,GO:0000938,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005795,GO:0005797,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0007034,GO:0007041,GO:0007275,GO:0007398,GO:0007439,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009826,GO:0009856,GO:0009860,GO:0009888,GO:0009893,GO:0009894,GO:0009896,GO:0009932,GO:0009987,GO:0010008,GO:0010506,GO:0010508,GO:0010668,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016239,GO:0016241,GO:0016482,GO:0017016,GO:0017137,GO:0019222,GO:0019725,GO:0019899,GO:0019905,GO:0019953,GO:0022414,GO:0030029,GO:0030154,GO:0031090,GO:0031267,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032386,GO:0032387,GO:0032388,GO:0032456,GO:0032501,GO:0032502,GO:0032588,GO:0032879,GO:0032989,GO:0032991,GO:0033036,GO:0034613,GO:0035295,GO:0036477,GO:0040007,GO:0040012,GO:0040017,GO:0042147,GO:0042592,GO:0042886,GO:0043025,GO:0043204,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044297,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045184,GO:0046907,GO:0048193,GO:0048468,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048520,GO:0048522,GO:0048565,GO:0048566,GO:0048568,GO:0048588,GO:0048589,GO:0048611,GO:0048729,GO:0048731,GO:0048856,GO:0048868,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050795,GO:0051020,GO:0051049,GO:0051050,GO:0051051,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0055037,GO:0055082,GO:0055088,GO:0055123,GO:0060341,GO:0060560,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090156,GO:0090325,GO:0090326,GO:0097458,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:0099023,GO:1903649,GO:1903650,GO:1903651,GO:1904809,GO:1904810,GO:1904811,GO:1990745
EggNOG free text desc.Golgi to vacuole transport
EggNOG OGsKOG1961@1,KOG1961@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131,ko04147,ko04812
Exons2
Model size639
Cds size639
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816665.2898018-CDS-M-pyrifera_M_contig76610:182..7391622816665.2898018-CDS-M-pyrifera_M_contig76610:182..739Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76610 183..739 -
1692278106.8306866-CDS-M-pyrifera_M_contig76610:182..7391692278106.8306866-CDS-M-pyrifera_M_contig76610:182..739Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76610 183..739 -
1622816665.300621-CDS-M-pyrifera_M_contig76610:943..10251622816665.300621-CDS-M-pyrifera_M_contig76610:943..1025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76610 944..1025 -
1692278106.8411522-CDS-M-pyrifera_M_contig76610:943..10251692278106.8411522-CDS-M-pyrifera_M_contig76610:943..1025Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76610 944..1025 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76610.18055.1prot_M-pyrifera_M_contig76610.18055.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76610 183..1025 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76610.18055.1

>prot_M-pyrifera_M_contig76610.18055.1 ID=prot_M-pyrifera_M_contig76610.18055.1|Name=mRNA_M-pyrifera_M_contig76610.18055.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=213bp
LEGLEEYLYDCHDSVALLCMLHLTHVHPTSVAAAAVPPVLEAYFDRVMML
LWPRFKNVLDANVLSIRQADAAKLALPSPALHPAVRRFAELSASILLLLG
ALNRVGTVDHMVRHNLQLLRGEVERLLGRLAQALPMRKTRVAFLLSQYRG
VLAVWKERKLVDDDVAHMEQMASTNAELFVEEELAEHFKRLINFVRETEA
AMRAAAKGSGSGG
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mRNA from alignment at M-pyrifera_M_contig76610:183..1025-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76610.18055.1 ID=mRNA_M-pyrifera_M_contig76610.18055.1|Name=mRNA_M-pyrifera_M_contig76610.18055.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=843bp|location=Sequence derived from alignment at M-pyrifera_M_contig76610:183..1025- (Macrocystis pyrifera P11B4 male)
CTTGAAGGGTTAGAAGAATACTTGTATGACTGTCATGACAGTGTTGCATT ACTTTGTATGCTACATCTCACTCACGTCCATCGTAGAGCATTCGCAGCTA CTGTGCAACGACGAGCTGCAGCACTTGCAGCATCTGTTGCACCAGCAATT TCACCTCCTCCACCACCATCACCATCCCCTGCAACAACAACTACAACAAC AACAACAACAAGTACATCAGATCAAACCCCACCTCCTTCCACACCATCAT CCTCTTCCACTCCAACTTCTTCAGCAACTCCAGCAGCTACAAGTGTAGCT GCAGCTGCTGTGCCACCAGTTTTGGAAGCGTACTTTGATCGAGTTATGAT GCTTCTATGGCCAAGGTTCAAGAATGTTTTGGATGCCAATGTGCTTTCAA TTCGGCAAGCTGATGCAGCTAAACTTGCGCTTCCCTCCCCAGCGCTCCAC CCAGCAGTTCGCCGCTTTGCTGAACTTTCAGCTTCTATTCTACTTCTTCT TGGTGCATTGAATCGTGTTGGTACGGTGGATCATATGGTGCGACACAATT TACAATTACTCCGGGGAGAAGTAGAACGTCTTCTTGGGAGATTAGCGCAA GCATTGCCCATGCGCAAGACTCGTGTCGCATTCCTCCTTTCACAATACCG CGGGGTCTTGGCTGTTTGGAAGGAGAGGAAGTTGGTAGATGATGACGTTG CTCATATGGAACAAATGGCTTCCACAAACGCGGAACTCTTTGTTGAAGAA GAACTGGCCGAACACTTCAAACGTCTCATCAACTTTGTCAGAGAAACAGA AGCGGCAATGCGTGCTGCTGCAAAAGGAAGCGGAAGTGGAGGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76610:183..1025-

>mRNA_M-pyrifera_M_contig76610.18055.1 ID=mRNA_M-pyrifera_M_contig76610.18055.1|Name=mRNA_M-pyrifera_M_contig76610.18055.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1278bp|location=Sequence derived from alignment at M-pyrifera_M_contig76610:183..1025- (Macrocystis pyrifera P11B4 male)
CTTGAAGGGTTAGAAGAATACTTGTATGACTGTCATGACAGTGTTGCATT
ACTTTGTATGCTACATCTCACTCACGTCCATCCTTGAAGGGTTAGAAGAA
TACTTGTATGACTGTCATGACAGTGTTGCATTACTTTGTATGCTACATCT
CACTCACGTCCATCCTACAAGTGTAGCTGCAGCTGCTGTGCCACCAGTTT
TGGAAGCGTACTTTGATCGAGTTATGATGCTTCTATGGCCAAGGTTCAAG
AATGTTTTGGATGCCAATGTGCTTTCAATTCGGCAAGCTGATGCAGCTAA
ACTTGCGCTTCCCTCCCCAGCGCTCCACCCAGCAGTTCGCCGCTTTGCTG
AACTTTCAGCTTCTATTCTACTTCTTCTTGGTGCATTGAATCGTGTTGGT
ACGGTGGATCATATGGTGCGACACAATTTACAATTACTCCGGGGAGAAGT
AGAACGTCTTCTTGGGAGATTAGCGCAAGCATTGCCCATGCGCAAGACTC
GTGTCGCATTCCTCCTTTCACAATACCGCGGGGTCTTGGCTGTTTGGAAG
GAGAGGAAGTTGGTAGATGATGACGTTGCTCATATGGAACAAATGGCTTC
CACAAACGCGGAACTCTTTGTTGAAGAAGAACTGGCCGAACACTTCAAAC
GTCTCATCAACTTTGTCAGAGAAACAGAAGCGGCAATGCGTGCTGCTGCA
AAAGGAAGCGGAAGTGGAGGTCTACAAGTGTAGCTGCAGCTGCTGTGCCA
CCAGTTTTGGAAGCGTACTTTGATCGAGTTATGATGCTTCTATGGCCAAG
GTTCAAGAATGTTTTGGATGCCAATGTGCTTTCAATTCGGCAAGCTGATG
CAGCTAAACTTGCGCTTCCCTCCCCAGCGCTCCACCCAGCAGTTCGCCGC
TTTGCTGAACTTTCAGCTTCTATTCTACTTCTTCTTGGTGCATTGAATCG
TGTTGGTACGGTGGATCATATGGTGCGACACAATTTACAATTACTCCGGG
GAGAAGTAGAACGTCTTCTTGGGAGATTAGCGCAAGCATTGCCCATGCGC
AAGACTCGTGTCGCATTCCTCCTTTCACAATACCGCGGGGTCTTGGCTGT
TTGGAAGGAGAGGAAGTTGGTAGATGATGACGTTGCTCATATGGAACAAA
TGGCTTCCACAAACGCGGAACTCTTTGTTGAAGAAGAACTGGCCGAACAC
TTCAAACGTCTCATCAACTTTGTCAGAGAAACAGAAGCGGCAATGCGTGC
TGCTGCAAAAGGAAGCGGAAGTGGAGGT
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