mRNA_M-pyrifera_M_contig76602.18051.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76602.18051.1
Unique NamemRNA_M-pyrifera_M_contig76602.18051.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: A0A2R5G438_9STRA (Protein kinase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G438_9STRA)

HSP 1 Score: 231 bits (588), Expect = 5.740e-66
Identity = 115/238 (48.32%), Postives = 163/238 (68.49%), Query Frame = 1
Query:    1 HEASTMARVCNHANIVDFVGIVLHPRPALVTRFMEHGSVERLLVRPGTHKDR--LSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFR-KQYSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAVYHGKRLPIPDSLPT--PLATIIKACFAHDPLARPTMPQVHASLMQFLRSQAAPPAPMHATPHSHSP 699
            HEA+ M+RV NH NIV FVG++L PRP +VT+ M  GSVE +LV PG    R  + +  +++M  DAAAG++HLH+ G++HRD++SRNLLVD+ + V+VADFGF+R K + RSKGYT   +GP+KW+APEA R +++SE++DVFSFG TL+E+LVGK PW+G+E  +V+  +  G+R  +PD +     L  ++K C  H P  RP M +VH  L   L++   PP     +  SH P
Sbjct:  749 HEAAMMSRVSNHENIVPFVGVLLTPRPCVVTKLMRGGSVEDMLVVPGPLYKRKTIPEARILQMLVDAAAGVLHLHSEGVIHRDIASRNLLVDENLRVKVADFGFARIKEINRSKGYTSQHVGPIKWMAPEAMRYRRFSEQTDVFSFGVTLFEVLVGKRPWEGIESMDVVYRICDGERQLVPDEVECNQALRDLVKRCQRHGPEERPVMKEVHRILASVLQTSQTPPPKPPTSSASHIP 986          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: A0A813CZ72_9DINO (Non-specific protein-tyrosine kinase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CZ72_9DINO)

HSP 1 Score: 215 bits (548), Expect = 8.720e-61
Identity = 110/219 (50.23%), Postives = 152/219 (69.41%), Query Frame = 1
Query:    1 HEASTMARVCNHANIVDFVGIVLHPRPALVTRFMEHGSVERLLVR--PGTHKDRLSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFRKQ-YSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAVYHGKRLPI---PDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQF 639
            HEA  M+RVC+H +IV F+G++  PRPA+VT+FM  GS+E +L++  P +    L   ++VR+A  AAAG++HLH   ++HRD+++RN LVD+G+ VRVADFGFSR +    SKGYTR+T GP+KW+APEA RK+ YS KSDVFSFG  LWE+  G  PW G E  +V+  V  G+RL +   PD LP  L  +++ C+A +   RP M  VHA+L+Q 
Sbjct:  812 HEAHLMSRVCSHDHIVQFIGVLSRPRPAVVTKFMALGSLEDILLQTSPRSMWKELGLPQLVRLAVQAAAGVLHLHHEDVIHRDIAARNCLVDQGLCVRVADFGFSRLRDRNASKGYTRSTTGPIKWMAPEAMRKRAYSVKSDVFSFGVLLWEIFTGTPPWKGEENLDVLFRVCGGERLDVAAQPD-LPPDLVKLMQQCWAQEAADRPDMQAVHAALLQL 1029          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: D8LB42_ECTSI (Protein tyrosine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB42_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 2.220e-58
Identity = 107/218 (49.08%), Postives = 142/218 (65.14%), Query Frame = 1
Query:    1 HEASTMARVCNHANIVDFVGIVLHPRPALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFRKQ-YSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAVYHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLRSQ 651
            HEA  +A+VCNH  +V FVG++L P P++VT FME+GSVE +LV   + K     L V RMA +AA G+IHLH  G+VHRDL+SRNLL+D G HVR++DFGFSR K    S+GYTR+ MGP+KW +PEA RK+ YSE SD FSFG  L+EM     PW+G E  +V   V  G+R+ +P  + +PLA ++  C+      RP    +  +L  F   Q
Sbjct:  702 HEARMLAKVCNHNCVVQFVGVLLRPVPSVVTMFMENGSVEDMLV--SSDKKATKDL-VCRMAIEAAKGVIHLHREGVVHRDLASRNLLLDDGFHVRISDFGFSRVKRECASRGYTRSDMGPIKWTSPEAMRKRCYSEASDAFSFGVVLYEMFARSPPWEGHENLDVAFRVCSGERMTVPPRVDSPLADLMHKCWNESSRLRPDFASILTALTAFAGDQ 916          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: L8HGU1_ACACA (Non-specific protein-tyrosine kinase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGU1_ACACA)

HSP 1 Score: 173 bits (439), Expect = 3.870e-47
Identity = 95/226 (42.04%), Postives = 138/226 (61.06%), Query Frame = 1
Query:    4 EASTMARVCNHANIVDFVGIVLHPRP-ALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFR-KQYSEKSDVFSFGCTLWEMLVGKTPWDGVEPF-EVMLAVY-HGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLRSQAAPPAP 669
            EA TM  V NH  +V F+G+        +V+ F   GS+ERL+   G ++  +    +V+MA DAAAG++HLH   ++HRD+++RN+++       V DFGF+R K    S  +T +T+GP K++APEA + K+YSEKSD FSFG  LWEM+ GK PW+  +   E+ + V   G RLPIPD+ P  LA ++  C+A DP  RP    +H +L  FL +  AP +P
Sbjct:  363 EAETMHVVGNHPCVVKFIGVCTKQGHFCIVSEFCTKGSLERLV--RGNNRASIPLRTIVQMARDAAAGILHLHCESVIHRDIAARNIMIGDNYSAHVGDFGFARVKDKNASSAFT-STIGPAKYMAPEAIKEKKYSEKSDAFSFGVLLWEMVTGKEPWEDQKSLVEIAIGVSSRGWRLPIPDNCPPQLADLMHRCWATDPKERPDFRAIHRTLSNFLLALPAPSSP 585          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: L8GMP4_ACACA (Thioredoxin, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMP4_ACACA)

HSP 1 Score: 166 bits (421), Expect = 5.180e-44
Identity = 90/219 (41.10%), Postives = 130/219 (59.36%), Query Frame = 1
Query:    4 EASTMARVCNHANIVDFVGIVLHPRP----ALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFR-KQYSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAVYHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLR 645
            EA  M R+ NH  IV FVG +         ALVT F   GS+  LLV+   +K +L  + +VRMA DAA+G++HLH   IVHRD+++RN+LV +   V V+DFG +RA+        T+   GP+ W+APEA + ++YSE +D FSFG  LWEM+  K PW GVEP +++ +V    RL IP       A ++K C+  +P  RP+  +V   L ++ +
Sbjct:  345 EAQMMERLSNHPGIVKFVGAITRGDDGANFALVTEFCPRGSLYDLLVK---NKKKLPLITLVRMARDAASGILHLHKEHIVHRDIAARNILVGQNYEVYVSDFGLARAQEADGQVATTKQNFGPLAWMAPEALKSREYSEATDAFSFGVLLWEMMARKRPWAGVEPVQIITSVTSNTRLRIPKDCDPIFAQLMKMCWRQNPSQRPSFDKVADVLSKYYK 560          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: L8HA88_ACACA (Protein kinase domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA88_ACACA)

HSP 1 Score: 167 bits (422), Expect = 8.160e-44
Identity = 91/219 (41.55%), Postives = 128/219 (58.45%), Query Frame = 1
Query:    4 EASTMARVCNHANIVDFVGIVLHPRP----ALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFR-KQYSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAVYHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLR 645
            EA  M R+ NH +IV FVG +         ALVT F   GS+  LLV+    K +L  + +VRMA DAA+G++HLH   IVHRDL++RN+LV +   V VADFG +R +        T+   GP+ W+APE  + ++YSE +D FSFG  LWEM+V K PW GVEP +++ +V    RL IP       A I+K C+  +P  RP+  ++   L  + +
Sbjct:  407 EAQMMERLSNHPSIVKFVGAITKGEEGSNFALVTEFCPRGSLYDLLVKK---KKKLPLITLVRMARDAASGVLHLHKEHIVHRDLAARNILVGQNYEVYVADFGLARVQAAEGQVATTKQNFGPIAWMAPEGLKAREYSEATDAFSFGVLLWEMMVKKRPWAGVEPVQIITSVVGNTRLRIPKDCDPIFAQIMKMCWRQNPAQRPSFEKLVDMLSSYYK 622          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: L8HCK5_ACACA (MAP kinase, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCK5_ACACA)

HSP 1 Score: 164 bits (414), Expect = 1.200e-42
Identity = 93/233 (39.91%), Postives = 132/233 (56.65%), Query Frame = 1
Query:    4 EASTMARVCNHANIVDFVGIV----------LHPRP-------ALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFR-KQYSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAVYHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLRS 648
            EA  M R+ NH NIV FVG +          + P P       ALVT F   GS+  LLV+    K +L  + +VRMA DAA+G++HLH   IVHRD+++RN+LV +   V VADFG +RA+        T+   GP+ W+APEA R ++YSE +D FSFG  LWEM+  K PW G+E  +V+ AV    RL IP         ++K C+  +P  RP+  ++  +L  + ++
Sbjct:  578 EAQMMERLSNHPNIVKFVGAITRGEYSDLAHVEPAPRNEGANFALVTEFCSRGSLLDLLVKK---KKKLPLITLVRMARDAASGILHLHKEHIVHRDIAARNILVGQNYEVYVADFGLARAQEAEGQVATTKQNFGPISWMAPEALRSREYSEATDAFSFGVLLWEMVERKRPWAGMEAVQVVTAVTTNTRLKIPKDCDPVFQRLMKMCWRQNPAHRPSFEKMVNTLSDYYKT 807          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: D5A8V0_PICSI (Protein kinase domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=D5A8V0_PICSI)

HSP 1 Score: 154 bits (389), Expect = 4.690e-42
Identity = 96/227 (42.29%), Postives = 137/227 (60.35%), Query Frame = 1
Query:    4 EASTMARVCNHANIVDFVGIVL-HPRPALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATG--IVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFRKQYS-EKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAV-YHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLRSQAAPPAP 669
            E + M R+  H N+V F+G VL  P  ++VT ++  GS+ RL+ RPGT ++ L +   +RMA D A G+ HLH     IVHRDL S NLLVDK   V+V DFG SR K    +   +++  G  +W+APE  R + S EKSDV+SFG  LWE++  + PW G+   +V+ AV +  +RL IP  +   +A II+AC+A+D   RP+     AS+M+ L+    PP P
Sbjct:   90 EVAIMKRL-RHPNVVLFMGAVLSRPNLSIVTEYLPRGSLYRLIHRPGT-REILDERRRLRMALDVAKGMNHLHRLNPPIVHRDLKSPNLLVDKTWTVKVCDFGLSRLKA--NTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELITLQQPWSGLNAAQVVGAVGFQNRRLQIPKDVKPDIAAIIEACWANDSRKRPSF----ASIMELLKPLVKPPTP 308          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: A0A6B9VW60_9LILI (CTR1-like protein kinase (Fragment) n=1 Tax=Lilium hybrid cultivar TaxID=156531 RepID=A0A6B9VW60_9LILI)

HSP 1 Score: 148 bits (374), Expect = 1.020e-40
Identity = 92/218 (42.20%), Postives = 131/218 (60.09%), Query Frame = 1
Query:    4 EASTMARVCNHANIVDFVGIVLH-PRPALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATG--IVHRDLSSRNLLVDKGMHVRVADFGFSRAKTVGRSKGYTRTTMGPVKWLAPEAFRKQ-YSEKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAV-YHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFL 642
            E S M RV  H N+V F+G V+  P  ++VT ++  GS+ RLL RP T  D L +   +RMA D A G+ +LH     IVH DL + NLLVDK   V+V DFG SR K    +   +++  G  +W+APE  R +  +EKSDVFSFG  LWE+L  + PW G+ P +V+ AV +  +RLP+P++    LA ++++C+A DP  RP    +  SL + L
Sbjct:   26 EVSIMKRV-RHPNVVLFMGAVIERPHLSIVTEYLPRGSLYRLLNRP-TAGDVLDRRRRLRMALDVAKGINYLHCLNPPIVHWDLKTPNLLVDKNWSVKVCDFGLSRFKA--NTFISSKSVAGTPEWMAPEFLRGEPTNEKSDVFSFGVILWELLTMQQPWSGLSPVQVVGAVAFQKRRLPVPENACPVLAALVESCWADDPRQRPAFSSIVDSLKKVL 239          
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Match: D8T1I5_SELML (Protein kinase domain-containing protein (Fragment) n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T1I5_SELML)

HSP 1 Score: 150 bits (378), Expect = 1.100e-40
Identity = 93/215 (43.26%), Postives = 127/215 (59.07%), Query Frame = 1
Query:   22 RVCNHANIVDFVGIVLHP-RPALVTRFMEHGSVERLLVRPGTHKDRLSQLEVVRMAADAAAGLIHLHATG--IVHRDLSSRNLLVDKGMHVRVADFGFSRAK--TVGRSKGYTRTTMGPVKWLAPEAFRKQYS-EKSDVFSFGCTLWEMLVGKTPWDGVEPFEVMLAV-YHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQVHASLMQFLR 645
            R   H N+V F+G V HP   A+VT ++  GS+ +LL RP    DR  +L+   MA D A G+ +LH+    IVHRDL S NLLVD+   V+V DFG SR K  T   SK    +T G  +W+APE  R + S EKSDVFSFG  LWE+   + PW G+ P +V+ AV +  +RLPIP  +   +A+II+ C+ +DP  RP+  ++   L    R
Sbjct:   63 RGLKHPNVVLFMGAVAHPPNLAIVTEYLPRGSLFKLLHRPHNQLDRRRRLQ---MALDVAEGMNYLHSCKPVIVHRDLKSPNLLVDRNWVVKVCDFGLSRIKHSTFLSSK----STAGTPEWMAPEVLRNEPSNEKSDVFSFGVILWELATSQKPWHGMNPMQVVGAVGFQHRRLPIPPDVDPSIASIIQECWQNDPSQRPSFEKILNDLQALQR 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76602.18051.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5G438_9STRA5.740e-6648.32Protein kinase, putative n=1 Tax=Hondaea fermental... [more]
A0A813CZ72_9DINO8.720e-6150.23Non-specific protein-tyrosine kinase n=1 Tax=Symbi... [more]
D8LB42_ECTSI2.220e-5849.08Protein tyrosine kinase n=1 Tax=Ectocarpus silicul... [more]
L8HGU1_ACACA3.870e-4742.04Non-specific protein-tyrosine kinase n=1 Tax=Acant... [more]
L8GMP4_ACACA5.180e-4441.10Thioredoxin, putative n=1 Tax=Acanthamoeba castell... [more]
L8HA88_ACACA8.160e-4441.55Protein kinase domain containing protein n=1 Tax=A... [more]
L8HCK5_ACACA1.200e-4239.91MAP kinase, putative n=1 Tax=Acanthamoeba castella... [more]
D5A8V0_PICSI4.690e-4242.29Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A6B9VW60_9LILI1.020e-4042.20CTR1-like protein kinase (Fragment) n=1 Tax=Lilium... [more]
D8T1I5_SELML1.100e-4043.26Protein kinase domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76602contigM-pyrifera_M_contig76602:2..700 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue1.4e-50
Seed eggNOG ortholog2880.D8LB42
Preferred nameRIPK3
KEGG koko:K08332,ko:K08841,ko:K08847
KEGG Pathwayko04217,ko04621,ko04623,ko04668,map04217,map04621,map04623,map04668
Hectar predicted targeting categoryother localisation
GOsGO:0001775,GO:0001776,GO:0001817,GO:0001910,GO:0001914,GO:0001932,GO:0001934,GO:0002260,GO:0002376,GO:0002520,GO:0002521,GO:0002682,GO:0002685,GO:0002691,GO:0002694,GO:0002697,GO:0002703,GO:0002706,GO:0002709,GO:0002819,GO:0002822,GO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004672,GO:0004674,GO:0004704,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0007154,GO:0007165,GO:0007249,GO:0007275,GO:0008150,GO:0008152,GO:0008219,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010646,GO:0010647,GO:0010921,GO:0010922,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030097,GO:0030098,GO:0030154,GO:0030217,GO:0030234,GO:0030334,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031341,GO:0031399,GO:0031401,GO:0032147,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032649,GO:0032879,GO:0032944,GO:0033077,GO:0033674,GO:0035303,GO:0035306,GO:0035556,GO:0036211,GO:0038061,GO:0040012,GO:0042110,GO:0042127,GO:0042129,GO:0042325,GO:0042327,GO:0042592,GO:0042802,GO:0042981,GO:0043029,GO:0043065,GO:0043067,GO:0043068,GO:0043085,GO:0043170,GO:0043412,GO:0043549,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045321,GO:0045859,GO:0045860,GO:0045935,GO:0045937,GO:0046006,GO:0046649,GO:0046777,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048535,GO:0048536,GO:0048538,GO:0048583,GO:0048584,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048872,GO:0050670,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050863,GO:0050865,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051249,GO:0051252,GO:0051254,GO:0051259,GO:0051260,GO:0051270,GO:0051291,GO:0051336,GO:0051338,GO:0051340,GO:0051341,GO:0051345,GO:0051347,GO:0051351,GO:0051353,GO:0051716,GO:0060255,GO:0060544,GO:0060545,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070228,GO:0070232,GO:0070235,GO:0070265,GO:0070266,GO:0070663,GO:0071704,GO:0071840,GO:0080090,GO:0097190,GO:0097300,GO:0097435,GO:0098772,GO:0140096,GO:0140110,GO:1901564,GO:1902531,GO:1902533,GO:1902680,GO:1903506,GO:1903508,GO:1990000,GO:2000106,GO:2000112,GO:2000145,GO:2000377,GO:2000379,GO:2000401,GO:2000404,GO:2000407,GO:2000449,GO:2000452,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0515@1,COG0666@1,KOG0192@2759,KOG4177@2759
EC2.7.11.1,2.7.12.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
Exons1
Model size699
Cds size684
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816665.1232512-UTR-M-pyrifera_M_contig76602:1..161622816665.1232512-UTR-M-pyrifera_M_contig76602:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76602 2..16 +
1692278106.7569351-UTR-M-pyrifera_M_contig76602:1..161692278106.7569351-UTR-M-pyrifera_M_contig76602:1..16Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76602 2..16 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816665.1348991-CDS-M-pyrifera_M_contig76602:16..7001622816665.1348991-CDS-M-pyrifera_M_contig76602:16..700Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76602 17..700 +
1692278106.7704327-CDS-M-pyrifera_M_contig76602:16..7001692278106.7704327-CDS-M-pyrifera_M_contig76602:16..700Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76602 17..700 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76602.18051.1prot_M-pyrifera_M_contig76602.18051.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76602 17..700 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76602.18051.1

>prot_M-pyrifera_M_contig76602.18051.1 ID=prot_M-pyrifera_M_contig76602.18051.1|Name=mRNA_M-pyrifera_M_contig76602.18051.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp
MARVCNHANIVDFVGIVLHPRPALVTRFMEHGSVERLLVRPGTHKDRLSQ
LEVVRMAADAAAGLIHLHATGIVHRDLSSRNLLVDKGMHVRVADFGFSRA
KTVGRSKGYTRTTMGPVKWLAPEAFRKQYSEKSDVFSFGCTLWEMLVGKT
PWDGVEPFEVMLAVYHGKRLPIPDSLPTPLATIIKACFAHDPLARPTMPQ
VHASLMQFLRSQAAPPAPMHATPHSHSP
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mRNA from alignment at M-pyrifera_M_contig76602:2..700+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76602.18051.1 ID=mRNA_M-pyrifera_M_contig76602.18051.1|Name=mRNA_M-pyrifera_M_contig76602.18051.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=699bp|location=Sequence derived from alignment at M-pyrifera_M_contig76602:2..700+ (Macrocystis pyrifera P11B4 male)
CATGAGGCATCCACGATGGCTCGAGTGTGCAACCATGCGAACATTGTGGA TTTCGTTGGAATCGTCTTGCACCCCAGACCAGCGTTGGTGACACGGTTCA TGGAGCATGGGTCGGTGGAGCGGTTGTTGGTACGTCCCGGGACGCACAAA GATCGCTTGTCGCAGCTGGAAGTGGTCCGAATGGCAGCAGATGCAGCTGC TGGACTTATCCACCTCCACGCCACTGGCATTGTCCACCGAGACTTGTCTT CGCGAAACCTCTTGGTGGACAAAGGCATGCACGTGCGAGTGGCTGACTTT GGTTTTTCCCGCGCCAAAACCGTGGGGAGGAGCAAAGGGTACACGAGGAC GACCATGGGACCAGTCAAGTGGCTTGCTCCAGAGGCGTTTCGGAAACAAT ACTCTGAAAAGTCGGATGTGTTCTCCTTCGGATGCACCTTGTGGGAAATG CTCGTGGGCAAAACTCCCTGGGATGGAGTGGAACCGTTTGAAGTGATGCT CGCAGTCTATCACGGCAAGCGCCTTCCCATCCCTGATTCTCTCCCAACAC CCCTCGCCACCATCATCAAGGCCTGCTTTGCACATGACCCGCTTGCCAGA CCAACCATGCCACAAGTCCACGCTTCGCTCATGCAATTCCTCAGATCCCA GGCCGCTCCCCCAGCACCCATGCATGCCACTCCACACTCACACTCTCCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76602:2..700+

>mRNA_M-pyrifera_M_contig76602.18051.1 ID=mRNA_M-pyrifera_M_contig76602.18051.1|Name=mRNA_M-pyrifera_M_contig76602.18051.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig76602:2..700+ (Macrocystis pyrifera P11B4 male)
ATGGCTCGAGTGTGCAACCATGCGAACATTGTGGATTTCGTTGGAATCGT
CTTGCACCCCAGACCAGCGTTGGTGACACGGTTCATGGAGCATGGGTCGG
TGGAGCGGTTGTTGGTACGTCCCGGGACGCACAAAGATCGCTTGTCGCAG
CTGGAAGTGGTCCGAATGGCAGCAGATGCAGCTGCTGGACTTATCCACCT
CCACGCCACTGGCATTGTCCACCGAGACTTGTCTTCGCGAAACCTCTTGG
TGGACAAAGGCATGCACGTGCGAGTGGCTGACTTTGGTTTTTCCCGCGCC
AAAACCGTGGGGAGGAGCAAAGGGTACACGAGGACGACCATGGGACCAGT
CAAGTGGCTTGCTCCAGAGGCGTTTCGGAAACAATACTCTGAAAAGTCGG
ATGTGTTCTCCTTCGGATGCACCTTGTGGGAAATGCTCGTGGGCAAAACT
CCCTGGGATGGAGTGGAACCGTTTGAAGTGATGCTCGCAGTCTATCACGG
CAAGCGCCTTCCCATCCCTGATTCTCTCCCAACACCCCTCGCCACCATCA
TCAAGGCCTGCTTTGCACATGACCCGCTTGCCAGACCAACCATGCCACAA
GTCCACGCTTCGCTCATGCAATTCCTCAGATCCCAGGCCGCTCCCCCAGC
ACCCATGCATGCCACTCCACACTCACACTCTCCCATGGCTCGAGTGTGCA
ACCATGCGAACATTGTGGATTTCGTTGGAATCGTCTTGCACCCCAGACCA
GCGTTGGTGACACGGTTCATGGAGCATGGGTCGGTGGAGCGGTTGTTGGT
ACGTCCCGGGACGCACAAAGATCGCTTGTCGCAGCTGGAAGTGGTCCGAA
TGGCAGCAGATGCAGCTGCTGGACTTATCCACCTCCACGCCACTGGCATT
GTCCACCGAGACTTGTCTTCGCGAAACCTCTTGGTGGACAAAGGCATGCA
CGTGCGAGTGGCTGACTTTGGTTTTTCCCGCGCCAAAACCGTGGGGAGGA
GCAAAGGGTACACGAGGACGACCATGGGACCAGTCAAGTGGCTTGCTCCA
GAGGCGTTTCGGAAACAATACTCTGAAAAGTCGGATGTGTTCTCCTTCGG
ATGCACCTTGTGGGAAATGCTCGTGGGCAAAACTCCCTGGGATGGAGTGG
AACCGTTTGAAGTGATGCTCGCAGTCTATCACGGCAAGCGCCTTCCCATC
CCTGATTCTCTCCCAACACCCCTCGCCACCATCATCAAGGCCTGCTTTGC
ACATGACCCGCTTGCCAGACCAACCATGCCACAAGTCCACGCTTCGCTCA
TGCAATTCCTCAGATCCCAGGCCGCTCCCCCAGCACCCATGCATGCCACT
CCACACTCACACTCTCCC
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