mRNA_M-pyrifera_M_contig76567.18046.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76567.18046.1
Unique NamemRNA_M-pyrifera_M_contig76567.18046.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: UPI001D14924A (hypothetical protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=UPI001D14924A)

HSP 1 Score: 469 bits (1208), Expect = 3.790e-166
Identity = 224/249 (89.96%), Postives = 236/249 (94.78%), Query Frame = 1
Query:    4 YRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            YRRAYFDDGTPLGSSSN+ECQIDAIAQSWSILSGAG ENRT VAMQSVDRRLIDDD+RLIRLLDPPFDKS+LNPGYIKGYVPGVRENGGQYTHSAIWTVMA AAMG+S RAW+LFSLINPVSHGSTPDEIS YRVEPYVVAADVYGV PHTGRGGWTWYTGSAGWMYRLIVESLLG+ELEVD+LRITP LPADW TFKMHYRYRETFYHITIHN+G+DAE S M+LDG+ELPDL IPL+DDH DHEV I
Sbjct:    6 YRRAYFDDGTPLGSSSNEECQIDAIAQSWSILSGAGPENRTTVAMQSVDRRLIDDDERLIRLLDPPFDKSDLNPGYIKGYVPGVRENGGQYTHSAIWTVMAKAAMGNSSRAWDLFSLINPVSHGSTPDEISTYRVEPYVVAADVYGVAPHTGRGGWTWYTGSAGWMYRLIVESLLGMELEVDRLRITPHLPADWPTFKMHYRYRETFYHITIHNSGTDAEVSQMSLDGVELPDLFIPLIDDHLDHEVEI 254          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A0A518ADD2_9PLAN (N,N'-diacetylchitobiose phosphorylase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A518ADD2_9PLAN)

HSP 1 Score: 506 bits (1303), Expect = 1.980e-161
Identity = 243/263 (92.40%), Postives = 251/263 (95.44%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVITAIAGKYDSSIYL 789
            WYRRAYFDDGTPLGSSSN+ECQIDAIAQSWSILSGAGSENRT VAMQSVDRRLIDDDD+LIRLLDPPFDK++LNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGV+PHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVD+LRITP LPADWT FKMHYRYRETFYHITIHNNGSDAE SLMTLDG ELPDL IPLVDDH+DHEVVIT I G+ DS   L
Sbjct: 2665 WYRRAYFDDGTPLGSSSNEECQIDAIAQSWSILSGAGSENRTTVAMQSVDRRLIDDDDQLIRLLDPPFDKADLNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVDPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDRLRITPRLPADWTAFKMHYRYRETFYHITIHNNGSDAEVSLMTLDGTELPDLFIPLVDDHKDHEVVITTIPGQIDSKTPL 2927          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A0A350K800_9PLAN (Cyclic beta 1-2 glucan synthetase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K800_9PLAN)

HSP 1 Score: 441 bits (1133), Expect = 4.140e-152
Identity = 211/250 (84.40%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            WYRRAYFDDGTPLGS+SN+ECQIDAIAQSWSILSGAG ENRT VAM+SV+RRL+  DDRLI+LLDPPFDKS+LNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPV HGSTPDEIS YRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGL L+VD+L + PCLPADWT FK+HYRYRETFYHITI N+ SD     M LDG EL D  I LVDD +DH V I
Sbjct:  188 WYRRAYFDDGTPLGSASNEECQIDAIAQSWSILSGAGPENRTSVAMESVNRRLVRSDDRLIQLLDPPFDKSDLNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVLHGSTPDEISTYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLNLDVDKLSLKPCLPADWTEFKIHYRYRETFYHITIRNDNSDTAVCRMMLDGEELTDNFITLVDDLQDHVVEI 437          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A6BYT1_9PLAN (Putative carbohydrate binding:Glycosyltransferase 36:Glycosyltransferase 36 associated protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A6BYT1_9PLAN)

HSP 1 Score: 439 bits (1128), Expect = 6.610e-138
Identity = 210/250 (84.00%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            WYRRAYFDDGTPLGS++N+ECQIDAIAQSWSILSGAG ENRT VAM+SV+RRL+  DDRLI+LLDPPFDKS+LNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDS RAWELFSLINPV HGSTPDEIS YRVEPYVVAADVYGV+PHTGRGGWTWYTGSAGWMYRLIVESLLGL L+VD+L + PCLPADWT FK+HYRYRETFYHITI N  S      MTLDG EL D II LVDD +DHEV I
Sbjct: 2659 WYRRAYFDDGTPLGSATNEECQIDAIAQSWSILSGAGPENRTSVAMESVNRRLVRSDDRLIQLLDPPFDKSDLNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSSRAWELFSLINPVLHGSTPDEISTYRVEPYVVAADVYGVKPHTGRGGWTWYTGSAGWMYRLIVESLLGLNLDVDKLSLKPCLPADWTEFKIHYRYRETFYHITIRNGNSATAVCRMTLDGEELSDNIITLVDDLQDHEVEI 2908          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A3ZX49_9BACT (Cyclic beta 1-2 glucan synthetase n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZX49_9BACT)

HSP 1 Score: 428 bits (1100), Expect = 3.820e-134
Identity = 199/250 (79.60%), Postives = 224/250 (89.60%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            WYRRAYFDDGTPLGSSSN+ECQIDAIAQSWS+LSG G+  R K+AM+SV+RRL+  D RLI LLDPPFDKS+LNPGYIKGYVPGVRENGGQYTHSAIWTVMA AAMGD+ RAWELFSLINP+SHG+TPD+I+ YRVEPYV AADVYGVEPHTGRGGWTWYTGS+GWMYRLIVESLLGL LE D++RITPCLPADWTTF++HYR+RETFYHITIHN+G+ A    MTLDG ++ +  I LVDD  DHEVV+
Sbjct: 2655 WYRRAYFDDGTPLGSSSNEECQIDAIAQSWSVLSGGGTHGRPKIAMESVNRRLVRRDARLILLLDPPFDKSDLNPGYIKGYVPGVRENGGQYTHSAIWTVMAAAAMGDNERAWELFSLINPISHGATPDDIAQYRVEPYVAAADVYGVEPHTGRGGWTWYTGSSGWMYRLIVESLLGLHLEGDKMRITPCLPADWTTFQIHYRFRETFYHITIHNHGAGATVCSMTLDGAKVHEEFISLVDDQCDHEVVV 2904          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A0A3N5WI80_9PROT (Cyclic beta 1-2 glucan synthetase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WI80_9PROT)

HSP 1 Score: 386 bits (992), Expect = 5.270e-130
Identity = 178/250 (71.20%), Postives = 209/250 (83.60%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            WYRRAYFDDG+PLGS+SN ECQID+IAQSWS+LSGAG   R+++AM++VD+RL+  DD LI+LLDPPFDKS LNPGYIKGYVPGVRENGGQYTH+AIWT MA AA+GDSRRAWELF +INPV+H  +   I++Y+VEPYVVAADVY + PHTGRGGWTWYTGSAGW+YRLIVESLLGL LEVD+LR  PCLPADW TFK+HYRYRET YHIT+    +    + +T+DG+      IPLVDDH +H V I
Sbjct:  232 WYRRAYFDDGSPLGSASNTECQIDSIAQSWSVLSGAGGAGRSRMAMEAVDKRLVRRDDTLIQLLDPPFDKSTLNPGYIKGYVPGVRENGGQYTHAAIWTAMAFAALGDSRRAWELFDMINPVNHADSVAAIAIYKVEPYVVAADVYAIAPHTGRGGWTWYTGSAGWLYRLIVESLLGLNLEVDKLRFAPCLPADWETFKLHYRYRETIYHITVSQTHAADHDTSITVDGVGQQGGSIPLVDDHLEHAVEI 481          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A0A419FRI9_9BACT (Cyclic beta 1-2 glucan synthetase (Fragment) n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A419FRI9_9BACT)

HSP 1 Score: 390 bits (1002), Expect = 8.420e-128
Identity = 177/260 (68.08%), Postives = 213/260 (81.92%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVITAIAGKYDSS 780
            WY RAYFDDGTPLGS++N EC+ID+IAQSWS+LSGAG   R+ +AM+S+D+ L+  D +LI+LLDPPFDKS+LNPGYIKGYVPGVRENGGQYTH+AIW  MA A  GDSRR WEL ++INP++HGS+P+EI  Y+VEPYV+AADVY V PHTGRGGWTWYTGSAGWMYRLI+ESLLGL LEVD+LR TPCLPADW +FK+HYRYRET YHIT+         + +T+DG+E PD  IPLVDD  +H V +   +GK + S
Sbjct:  538 WYLRAYFDDGTPLGSAANPECRIDSIAQSWSVLSGAGDAGRSSMAMESLDKYLVRRDHKLIQLLDPPFDKSDLNPGYIKGYVPGVRENGGQYTHAAIWAAMAFAKSGDSRRVWELLAMINPLNHGSSPEEIETYKVEPYVIAADVYAVSPHTGRGGWTWYTGSAGWMYRLIMESLLGLRLEVDKLRFTPCLPADWESFKVHYRYRETLYHITVMQTRDRNGETSVTVDGVEQPDNTIPLVDDRREHVVEVRISSGKMEDS 797          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A0A836PXJ7_9BACT (Glyco_hydro_36 domain-containing protein n=1 Tax=Candidatus Melainabacteria bacterium TaxID=2052166 RepID=A0A836PXJ7_9BACT)

HSP 1 Score: 372 bits (956), Expect = 2.050e-127
Identity = 168/251 (66.93%), Postives = 201/251 (80.08%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVIT 753
            WYRRAYFDDGTPLGSS N+ECQID+I+QSWSILSG G   R+K  M S   RL+  D  LI+LLDPPFDKSELNPGYIKGYVPGVRENGGQYTH+AIW  MA AA+GDSRRAW+LF++INPV+H   P+ +  Y  EPYVVAADVYGV PHTGRGGWTWYTGSA WMYRLI+ES+LG+ L+VD+LR  PCLPA+W+ +K+HYRYRET +HIT+           +T+DG+E PD ++ LVDD  +H VV++
Sbjct:   28 WYRRAYFDDGTPLGSSKNEECQIDSISQSWSILSGGGEIERSKKGMNSAYERLVRHDSALIQLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHAAIWLTMAFAALGDSRRAWQLFTMINPVNHALNPNSMRTYMAEPYVVAADVYGVAPHTGRGGWTWYTGSASWMYRLIIESILGIRLQVDKLRFQPCLPAEWSEYKIHYRYRETVFHITVLQRSDSDGHQTVTVDGVEQPDGVVSLVDDRREHNVVVS 278          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: A0A3N5N0G2_9BACT (Cyclic beta 1-2 glucan synthetase (Fragment) n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A3N5N0G2_9BACT)

HSP 1 Score: 385 bits (990), Expect = 1.080e-126
Identity = 177/253 (69.96%), Postives = 210/253 (83.00%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSD---AEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            WYRRAYFDDG+PLGS+ N ECQIDAIAQSWS+LSGAG   R+++AM++ D+RL+  D RLI+LLDPPFDKS+LNPGYIKGYVPGVRENGGQYTH AIWT MA AA+GDSRRAWEL ++INPV+HG T +EI+ Y+VEPYVVAADVY V PH GRGGWTWYTGSAGWMYRLI+ESLLGL LEVD+LR  PCLP DW +FK+HYRYRET YHI++    +      A+ +T+DG+E PD  IPL+DD  +H V +
Sbjct:  469 WYRRAYFDDGSPLGSAGNAECQIDAIAQSWSVLSGAGDAERSRMAMEAADKRLVRRDHRLIQLLDPPFDKSDLNPGYIKGYVPGVRENGGQYTHGAIWTAMAFAALGDSRRAWELLAMINPVNHGRTREEIATYKVEPYVVAADVYAVSPHVGRGGWTWYTGSAGWMYRLILESLLGLRLEVDKLRFAPCLPEDWESFKVHYRYRETLYHISVRQITAQPGAGSAAGVTVDGVEQPDNAIPLLDDRREHSVEV 721          
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Match: UPI00199C766C (Cyclic beta 1-2 glucan synthetase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI00199C766C)

HSP 1 Score: 381 bits (979), Expect = 3.030e-124
Identity = 177/250 (70.80%), Postives = 202/250 (80.80%), Query Frame = 1
Query:    1 WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVDRRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTVMATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEPHTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKMHYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI 750
            WYRRAYFDDG PLGS+ N EC+IDA+ QSW++LSGAGS +R   AM +V+R L+  D RLI++LDPPFDKS L PGYIKGYVPGVRENGGQYTH+A+WT MA AAMGD++RAWELF LINPVSH +TP+E++ YRVEPYV AADVY V PHTGRGGWTWYTGSAGWMYRLI ESLLGL LEVD LR +PCLP DWT FK+HYRYRET YHI I N G     S +T DG E  DL + LVDD +DH V +
Sbjct:  557 WYRRAYFDDGGPLGSALNPECKIDALPQSWAVLSGAGSRDRATTAMNNVERFLVRTDARLIQVLDPPFDKSSLEPGYIKGYVPGVRENGGQYTHAAVWTAMAFAAMGDTKRAWELFRLINPVSHATTPEEVARYRVEPYVAAADVYAVPPHTGRGGWTWYTGSAGWMYRLITESLLGLHLEVDCLRFSPCLPKDWTGFKIHYRYRETVYHIEIRNGGGGTSVSRVTADGREQSDLRVHLVDDRQDHHVQV 806          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76567.18046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001D14924A3.790e-16689.96hypothetical protein n=1 Tax=Gimesia benthica TaxI... [more]
A0A518ADD2_9PLAN1.980e-16192.40N,N'-diacetylchitobiose phosphorylase n=5 Tax=Gime... [more]
A0A350K800_9PLAN4.140e-15284.40Cyclic beta 1-2 glucan synthetase (Fragment) n=1 T... [more]
A6BYT1_9PLAN6.610e-13884.00Putative carbohydrate binding:Glycosyltransferase ... [more]
A3ZX49_9BACT3.820e-13479.60Cyclic beta 1-2 glucan synthetase n=1 Tax=Blastopi... [more]
A0A3N5WI80_9PROT5.270e-13071.20Cyclic beta 1-2 glucan synthetase (Fragment) n=1 T... [more]
A0A419FRI9_9BACT8.420e-12868.08Cyclic beta 1-2 glucan synthetase (Fragment) n=1 T... [more]
A0A836PXJ7_9BACT2.050e-12766.93Glyco_hydro_36 domain-containing protein n=1 Tax=C... [more]
A0A3N5N0G2_9BACT1.080e-12669.96Cyclic beta 1-2 glucan synthetase (Fragment) n=1 T... [more]
UPI00199C766C3.030e-12470.80Cyclic beta 1-2 glucan synthetase n=1 Tax=Deltapro... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76567contigM-pyrifera_M_contig76567:223..1026 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score441.8
Seed ortholog evalue2.3e-121
Seed eggNOG ortholog344747.PM8797T_27899
Preferred namendvB
KEGG koko:K13688
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Putative glucoamylase
EggNOG OGs2IYJ0@203682,COG3459@1,COG3459@2
COG Functional cat.G
CAZyGH94,GT84
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01003
Exons1
Model size804
Cds size804
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816664.8461275-CDS-M-pyrifera_M_contig76567:222..10261622816664.8461275-CDS-M-pyrifera_M_contig76567:222..1026Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76567 223..1026 -
1692278106.5803022-CDS-M-pyrifera_M_contig76567:222..10261692278106.5803022-CDS-M-pyrifera_M_contig76567:222..1026Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76567 223..1026 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76567.18046.1prot_M-pyrifera_M_contig76567.18046.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76567 223..1026 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76567.18046.1

>prot_M-pyrifera_M_contig76567.18046.1 ID=prot_M-pyrifera_M_contig76567.18046.1|Name=mRNA_M-pyrifera_M_contig76567.18046.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
WYRRAYFDDGTPLGSSSNKECQIDAIAQSWSILSGAGSENRTKVAMQSVD
RRLIDDDDRLIRLLDPPFDKSELNPGYIKGYVPGVRENGGQYTHSAIWTV
MATAAMGDSRRAWELFSLINPVSHGSTPDEISVYRVEPYVVAADVYGVEP
HTGRGGWTWYTGSAGWMYRLIVESLLGLELEVDQLRITPCLPADWTTFKM
HYRYRETFYHITIHNNGSDAEASLMTLDGIELPDLIIPLVDDHEDHEVVI
TAIAGKYDSSIYLSKFH*
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mRNA from alignment at M-pyrifera_M_contig76567:223..1026-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76567.18046.1 ID=mRNA_M-pyrifera_M_contig76567.18046.1|Name=mRNA_M-pyrifera_M_contig76567.18046.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig76567:223..1026- (Macrocystis pyrifera P11B4 male)
TGGTACCGCCGCGCCTATTTTGATGATGGCACGCCGCTGGGATCGTCTTC AAATAAAGAATGTCAGATCGATGCCATCGCACAGAGCTGGTCGATCCTGT CTGGTGCCGGTTCGGAAAATCGAACGAAGGTTGCCATGCAAAGTGTGGAT CGCCGACTGATTGACGACGACGATCGATTGATCCGGTTACTGGATCCTCC CTTTGACAAGTCAGAGCTCAACCCGGGATATATCAAAGGTTATGTTCCCG GTGTACGGGAAAATGGTGGTCAATACACGCACAGTGCCATCTGGACTGTC ATGGCGACAGCTGCAATGGGAGACAGCAGGCGTGCCTGGGAGCTGTTTTC ACTCATCAATCCAGTATCCCATGGATCGACACCGGATGAGATTTCAGTCT ATCGCGTTGAACCGTACGTCGTAGCTGCAGACGTTTATGGAGTGGAACCC CATACCGGACGAGGTGGCTGGACGTGGTATACCGGATCTGCTGGCTGGAT GTACCGCCTGATTGTGGAATCTCTGTTGGGGCTGGAACTGGAAGTGGATC AGTTGCGTATCACACCTTGCCTGCCTGCTGACTGGACCACTTTTAAAATG CATTATCGCTATCGCGAAACCTTCTATCATATCACCATTCACAACAACGG CTCCGACGCAGAAGCCAGCCTGATGACTCTGGATGGTATCGAGTTGCCAG ACCTGATCATTCCCCTTGTCGACGACCATGAAGACCATGAAGTTGTTATT ACGGCCATCGCAGGCAAGTATGACAGCAGTATTTATCTGAGTAAGTTCCA CTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76567:223..1026-

>mRNA_M-pyrifera_M_contig76567.18046.1 ID=mRNA_M-pyrifera_M_contig76567.18046.1|Name=mRNA_M-pyrifera_M_contig76567.18046.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig76567:223..1026- (Macrocystis pyrifera P11B4 male)
TGGTACCGCCGCGCCTATTTTGATGATGGCACGCCGCTGGGATCGTCTTC
AAATAAAGAATGTCAGATCGATGCCATCGCACAGAGCTGGTCGATCCTGT
CTGGTGCCGGTTCGGAAAATCGAACGAAGGTTGCCATGCAAAGTGTGGAT
CGCCGACTGATTGACGACGACGATCGATTGATCCGGTTACTGGATCCTCC
CTTTGACAAGTCAGAGCTCAACCCGGGATATATCAAAGGTTATGTTCCCG
GTGTACGGGAAAATGGTGGTCAATACACGCACAGTGCCATCTGGACTGTC
ATGGCGACAGCTGCAATGGGAGACAGCAGGCGTGCCTGGGAGCTGTTTTC
ACTCATCAATCCAGTATCCCATGGATCGACACCGGATGAGATTTCAGTCT
ATCGCGTTGAACCGTACGTCGTAGCTGCAGACGTTTATGGAGTGGAACCC
CATACCGGACGAGGTGGCTGGACGTGGTATACCGGATCTGCTGGCTGGAT
GTACCGCCTGATTGTGGAATCTCTGTTGGGGCTGGAACTGGAAGTGGATC
AGTTGCGTATCACACCTTGCCTGCCTGCTGACTGGACCACTTTTAAAATG
CATTATCGCTATCGCGAAACCTTCTATCATATCACCATTCACAACAACGG
CTCCGACGCAGAAGCCAGCCTGATGACTCTGGATGGTATCGAGTTGCCAG
ACCTGATCATTCCCCTTGTCGACGACCATGAAGACCATGAAGTTGTTATT
ACGGCCATCGCAGGCAAGTATGACAGCAGTATTTATCTGAGTAAGTTCCA
CTAATGGTACCGCCGCGCCTATTTTGATGATGGCACGCCGCTGGGATCGT
CTTCAAATAAAGAATGTCAGATCGATGCCATCGCACAGAGCTGGTCGATC
CTGTCTGGTGCCGGTTCGGAAAATCGAACGAAGGTTGCCATGCAAAGTGT
GGATCGCCGACTGATTGACGACGACGATCGATTGATCCGGTTACTGGATC
CTCCCTTTGACAAGTCAGAGCTCAACCCGGGATATATCAAAGGTTATGTT
CCCGGTGTACGGGAAAATGGTGGTCAATACACGCACAGTGCCATCTGGAC
TGTCATGGCGACAGCTGCAATGGGAGACAGCAGGCGTGCCTGGGAGCTGT
TTTCACTCATCAATCCAGTATCCCATGGATCGACACCGGATGAGATTTCA
GTCTATCGCGTTGAACCGTACGTCGTAGCTGCAGACGTTTATGGAGTGGA
ACCCCATACCGGACGAGGTGGCTGGACGTGGTATACCGGATCTGCTGGCT
GGATGTACCGCCTGATTGTGGAATCTCTGTTGGGGCTGGAACTGGAAGTG
GATCAGTTGCGTATCACACCTTGCCTGCCTGCTGACTGGACCACTTTTAA
AATGCATTATCGCTATCGCGAAACCTTCTATCATATCACCATTCACAACA
ACGGCTCCGACGCAGAAGCCAGCCTGATGACTCTGGATGGTATCGAGTTG
CCAGACCTGATCATTCCCCTTGTCGACGACCATGAAGACCATGAAGTTGT
TATTACGGCCATCGCAGGCAAGTATGACAGCAGTATTTATCTGAGTAAGT
TCCACTAA
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