mRNA_M-pyrifera_M_contig76520.18034.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76520.18034.1
Unique NamemRNA_M-pyrifera_M_contig76520.18034.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A7X5WRX8_9ACTN (Citrate synthase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WRX8_9ACTN)

HSP 1 Score: 475 bits (1223), Expect = 1.440e-166
Identity = 245/287 (85.37%), Postives = 256/287 (89.20%), Query Frame = 1
Query:    1 ATRVADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEPEVSV 861
            A  V DPMVTLR GLLALGDHEGRG +LDR    L DDA+RLAAVVPTIL RHHR+R G  PV PDP LG AADYLRMATG AP P AARAVEQYLVATVDHGFNASTFTGRVVASTGADMAG+LVAA+GALTGPLHGGAPSRCIQMI+EIG P RAADWVR+RLD G+KIMGFGHAVYRAEDPRGVVLREAAE LGGDLVARAA IE EIL VLA+WKP QRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRS+GWTAHVIEQH VGKI+RPSARYVGP P VSV
Sbjct:   83 AALVRDPMVTLRAGLLALGDHEGRGPILDRDRAQLDDDALRLAAVVPTILARHHRIRLGAAPVAPDPELGHAADYLRMATGSAPSPDAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGALVAAIGALTGPLHGGAPSRCIQMIEEIGEPARAADWVRNRLDNGEKIMGFGHAVYRAEDPRGVVLREAAEGLGGDLVARAAGIEQEILGVLAEWKPDQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSVGWTAHVIEQHGVGKIMRPSARYVGPVPGVSV 369          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A7K1Z9H3_9ACTN (Citrate synthase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9H3_9ACTN)

HSP 1 Score: 441 bits (1134), Expect = 4.940e-153
Identity = 222/283 (78.45%), Postives = 242/283 (85.51%), Query Frame = 1
Query:   10 VADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEPEVS 858
            V DPMV LR+G+LA+GD EGRG +LDR+ + +  DA+RLAAVVPTIL RH+R R+G  PVDPDP +G AADY RM T   P   A RA+EQYLVAT+DHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRC+QMIDEIG P  AADW R RL AGDKIMGFGHAVYRAEDPRGVVLREAAE LGG+LV RAA IE EILAVLA+W+P QRIVTNVEFWA VVLEL GLPR MFTPTFSVSRSIGW AHV+EQH  GKI+RPSARYVGPEP V+
Sbjct:   86 VTDPMVALRIGMLAVGDQEGRGPLLDRNPEEIHGDAMRLAAVVPTILARHYRRRRGLSPVDPDPQMGHAADYFRMVTDSVPSAEAERAIEQYLVATLDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCMQMIDEIGDPSAAADWTRARLGAGDKIMGFGHAVYRAEDPRGVVLREAAERLGGELVDRAAGIEGEILAVLAEWRPDQRIVTNVEFWAGVVLELVGLPREMFTPTFSVSRSIGWAAHVVEQHEEGKIMRPSARYVGPEPVVA 368          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A7K1YWZ3_9ACTN (Citrate synthase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YWZ3_9ACTN)

HSP 1 Score: 414 bits (1065), Expect = 1.370e-142
Identity = 212/280 (75.71%), Postives = 235/280 (83.93%), Query Frame = 1
Query:   19 PMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEPEVS 858
            PM  LRVGLLA+   E RG +LDR+     DDA+RLAAVVPT+L RHHR RQG  P+DPD  L    DYLRM TG  P PA ARAVEQYLVAT+DHGFNASTFT RVVASTGADMAGSLVA VGALTGPLHGGAPSR ++MI+EIG P+RAA WVR RL+AG KIMGFGHAVYRA DPRGVVLR AAE LGG+LV RAAAIE E+L VLA+W+PGQRIVTNVE+WA+VVLELAGLPRAMFTPTF+VSR+IGW+AHV+EQ   GKI+RPSARYVGPEP  S
Sbjct:   89 PMAVLRVGLLAVAALEDRGPLLDRTASQRRDDALRLAAVVPTVLARHHRRRQGLDPMDPDAGLSHCEDYLRMTTGARPGPAEARAVEQYLVATLDHGFNASTFTSRVVASTGADMAGSLVAGVGALTGPLHGGAPSRAMEMIEEIGEPERAAAWVRARLEAGHKIMGFGHAVYRAADPRGVVLRAAAESLGGELVCRAAAIEAEVLRVLAEWRPGQRIVTNVEYWAAVVLELAGLPRAMFTPTFAVSRTIGWSAHVLEQAAAGKILRPSARYVGPEPSRS 368          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A6B1E8Z3_9ACTN (Citrate synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E8Z3_9ACTN)

HSP 1 Score: 411 bits (1056), Expect = 3.200e-141
Identity = 207/283 (73.14%), Postives = 234/283 (82.69%), Query Frame = 1
Query:    1 ATRVADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEP 849
            + R+ DPM  LR+GLLA+G  E RG +LDR+     DDA+RLAA+VPT+L RHHR RQG  P++PD  L    DYLRM TG  PD AAARAVEQYLVAT+DHGFNASTFT RVVASTGADMAGSLVAAVGAL+GPLHGGAPSR ++M+ EIG+P RA  W R RL+ G KIMGFGHAVYRA DPRGVVLR AAE LGGDLV+ AAAIE EIL VLA+W+PG RIVTNVE+WA VVLELAGLPR MFTPTF+VSR+IGW+AHV+EQ   GKI+RPSARYVGPEP
Sbjct:   83 SARLDDPMAVLRIGLLAVGAQEDRGPLLDRTTAQRRDDALRLAAIVPTVLARHHRRRQGLDPIEPDQALPHTQDYLRMTTGAGPDQAAARAVEQYLVATLDHGFNASTFTSRVVASTGADMAGSLVAAVGALSGPLHGGAPSRAMEMVTEIGSPARAGPWTRSRLEDGHKIMGFGHAVYRAADPRGVVLRAAAESLGGDLVSSAAAIEEEILRVLAEWRPGNRIVTNVEYWAGVVLELAGLPRDMFTPTFAVSRTIGWSAHVLEQAEAGKILRPSARYVGPEP 365          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A3M2G5C5_ACTSX (Citrate synthase (unknown stereospecificity) (Fragment) n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G5C5_ACTSX)

HSP 1 Score: 402 bits (1033), Expect = 4.290e-137
Identity = 204/277 (73.65%), Postives = 235/277 (84.84%), Query Frame = 1
Query:    1 ATRVADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSAR 831
            A RVADP+V +RV LLAL D EGRG +LDR D     DA+RLAAVVPT+L RHHR RQG  PV PDP+LG AAD+LRM TG  PDP AA A+E+YL+ATVDHGFNASTFT RVVASTGADMAG+LVAA+GAL+GPLHGGAPSRC+ MI++IG PDRAA WVR+RL AG++IMGFGHAVYR  DPRGV+LREAAE LGG+LV RAAAIE  ILA LA  KP QR+VTNVE+WA+VV+ELAGLPR +FTPTF+VSR+IGWTAHV+EQ   G+I+RPSAR
Sbjct:  135 ADRVADPLVAVRVALLALADAEGRGPLLDRDDPVRRADALRLAAVVPTVLARHHRRRQGRAPVAPDPSLGHAADHLRMVTGQEPDPGAAAALERYLIATVDHGFNASTFTARVVASTGADMAGALVAAIGALSGPLHGGAPSRCLAMIEQIGEPDRAAAWVRERLAAGERIMGFGHAVYRTRDPRGVLLREAAESLGGELVERAAAIEEVILAELAARKPDQRLVTNVEYWAAVVMELAGLPRDLFTPTFAVSRTIGWTAHVLEQASRGRIIRPSAR 411          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A7K2AM45_9ACTN (Citrate synthase (unknown stereospecificity) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2AM45_9ACTN)

HSP 1 Score: 392 bits (1006), Expect = 1.260e-133
Identity = 204/283 (72.08%), Postives = 225/283 (79.51%), Query Frame = 1
Query:    1 ATRVADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEP 849
            + R+ DPM  LRVGLLA+G  EGRG +LDRS     DDAVRLAAVVPTIL RHHR R G  PV PD  +  AADYLRM+TG      A RAVEQYLV T+DHGFN STF  RVVASTGADMAG+LVA +GALTGPLHGGAPSR I+MI++I TP+RAA WV  RL  G KIMGFGHAVYR  DPRGVVLR AAE LGGDLV RAA IE EIL VLA WKPG RI+TNVE+WASV LELAG+PR MFTPTF+VSRSIGW AHV+EQ   GK++RP+ARYVGPEP
Sbjct:   83 SARMEDPMAVLRVGLLAVGAVEGRGPLLDRSAAQRRDDAVRLAAVVPTILARHHRRRGGLEPVPPDAGVSHAADYLRMSTGGTAAARAVRAVEQYLVVTLDHGFNVSTFASRVVASTGADMAGALVAGLGALTGPLHGGAPSRVIEMIEDIHTPERAAAWVSKRLAEGHKIMGFGHAVYRVRDPRGVVLRAAAESLGGDLVERAAGIEEEILTVLAKWKPGVRILTNVEYWASVALELAGVPRRMFTPTFAVSRSIGWAAHVLEQAEKGKLLRPAARYVGPEP 365          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A7C1UGK0_9ACTN (Citrate synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UGK0_9ACTN)

HSP 1 Score: 392 bits (1007), Expect = 2.140e-133
Identity = 194/280 (69.29%), Postives = 228/280 (81.43%), Query Frame = 1
Query:   19 PMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEPEVS 858
            P+ TLR GLL+L   E RG +LDR      +DA+R+AAVVPTIL RHHR+  G+ PV+PDP L   ADYLRM  G  PD  A  AV++YLVAT+DHGFNASTFT RVVASTGADMAGS+VAA+GAL+GPLHGGAPSR + MI+EIG P  A  WV DRLD G+KIMGFGHAVYR  DPRGV+LREAAE LGG+LV  AAAIE+EILA LA+WKPG+RIVTNVE+WA+VVLELAG+PR+MFTPTF VSR+IGW+AH++EQ   G+I+RPSA Y+GPEP  S
Sbjct:  113 PLDTLRAGLLSLAAAEHRGPLLDRDPRQSREDAIRMAAVVPTILARHHRIATGQTPVEPDPGLSHTADYLRMLVGAPPDETAVDAVQRYLVATIDHGFNASTFTARVVASTGADMAGSMVAAIGALSGPLHGGAPSRALAMIEEIGEPSAARGWVADRLDRGEKIMGFGHAVYRTADPRGVLLREAAEGLGGELVELAAAIESEILAALAEWKPGRRIVTNVEYWAAVVLELAGVPRSMFTPTFDVSRAIGWSAHILEQAAEGRIIRPSAHYIGPEPSPS 392          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A520XZ65_9ACTN (Citrate synthase n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XZ65_9ACTN)

HSP 1 Score: 340 bits (873), Expect = 3.010e-113
Identity = 174/280 (62.14%), Postives = 211/280 (75.36%), Query Frame = 1
Query:   10 VADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEP 849
            +AD +  +R  +LA+ + E    +LD        + +RL A+VPTI+ RH+R R G  P+ PDP+L  AADYLRMATG  P    +RAVE+YLVAT+DHGFNASTFT RVV STGA  A +LVA  GAL+GPLHGGAP R + MI+EIG  + A  WV+ +LDA +KIMGFGHAVYRAEDPRG+VLREAAE +GGDL  RA  IE EILA+LA+WKP Q IVTNVE+WA+V L +AG P  +FTPTF+VSR IGW+AHV+EQ   GKI+RPSARYVGPEP
Sbjct:  101 MADALAVIRSAMLAVAELEEHQPVLDIGHVERRGNVLRLMAIVPTIVARHYRRRNGLEPIAPDPSLTHAADYLRMATGEVPAELNSRAVEKYLVATIDHGFNASTFTTRVVTSTGASAASALVAGFGALSGPLHGGAPGRALAMIEEIGGAENARAWVQAKLDAKEKIMGFGHAVYRAEDPRGIVLREAAEAIGGDLADRAIGIEAEILAMLAEWKPDQTIVTNVEYWAAVALGIAGFPPELFTPTFAVSRVIGWSAHVLEQAEDGKIIRPSARYVGPEP 380          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: UPI001F3E0539 (citrate synthase n=1 Tax=Yinghuangia sp. KLBMP8922 TaxID=2908204 RepID=UPI001F3E0539)

HSP 1 Score: 331 bits (848), Expect = 3.290e-109
Identity = 170/285 (59.65%), Postives = 209/285 (73.33%), Query Frame = 1
Query:    1 ATRVADPMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVG-PEPE 852
            ATR   P+  ++  L  +G   G   + D +     DDA+ LAAVVPT++   HR++QG+ PV+P   L  AA+YL MATG  PDP  ARAVE YLV+TVDHGFNASTFTGRV+ASTGAD+A  +  A+GALTGPLHGGAPSR +  +D IGTPDRA  W+ DR+ AG++IMGFGH VYR EDPR  +LRE A  LGGDLVA AA +E E++ VLAD KPG+ + TNVEFWA VV+EL GLPR+MFTPTF+ SR +GWTAH +EQ    KI+RP+ARY G P P+
Sbjct:  110 ATRADGPLAGVKALLPLVGSALGMRPLYDSTAHRRQDDALALAAVVPTLITALHRLQQGQEPVEPRDDLAYAANYLHMATGSEPDPVRARAVEAYLVSTVDHGFNASTFTGRVIASTGADLASCVAGALGALTGPLHGGAPSRALDTLDAIGTPDRARAWITDRVLAGERIMGFGHPVYRTEDPRARMLREIAYGLGGDLVAFAAEVEREVVRVLADLKPGRELHTNVEFWAGVVMELCGLPRSMFTPTFAASRVVGWTAHALEQAADSKIIRPAARYAGTPAPQ 394          
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Match: A0A2E0RU48_9ACTN (Citrate synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RU48_9ACTN)

HSP 1 Score: 329 bits (844), Expect = 9.020e-109
Identity = 167/282 (59.22%), Postives = 202/282 (71.63%), Query Frame = 1
Query:   19 PMVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVRQGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNASTFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRAADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAIETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIGWTAHVIEQHHVGKIVRPSARYVGPEPEVSVA 864
            P+  LR  L A     G   +LD S+    D A+ +AAVVP ILG  HR   G P V+PDP+LG AA YL   TG  P+PA ARA+EQYL+ T+DHGFNASTFTGRVVASTGAD+A    AA+GAL GPLHGGAPSR +  +D IGTP+RA DWVR  + AG +IMGFGHAVYRA DPR  +LRE A  LGG+LV RA AIETE+L  LA+ KP + + +NVEF+A V++E  GLPR MFTPTF+VSR++GW  H +EQ   GK++RP+ARYVGP P    A
Sbjct:   95 PLARLRSVLSAASGPLGLAPLLDLSESDRRDQAIAVAAVVPAILGALHRSASGLPMVEPDPSLGHAAAYLHQVTGTNPEPAHARALEQYLILTIDHGFNASTFTGRVVASTGADLADVACAAIGALAGPLHGGAPSRALDALDAIGTPERAPDWVRGEVAAGRRIMGFGHAVYRAPDPRSALLREVAGELGGELVERAIAIETEVLTTLAELKPDRPLPSNVEFYAGVIMETVGLPREMFTPTFAVSRTVGWVTHALEQAASGKLIRPAARYVGPAPRRDAA 376          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76520.18034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WRX8_9ACTN1.440e-16685.37Citrate synthase n=1 Tax=Actinomycetia bacterium T... [more]
A0A7K1Z9H3_9ACTN4.940e-15378.45Citrate synthase n=2 Tax=Acidimicrobiaceae bacteri... [more]
A0A7K1YWZ3_9ACTN1.370e-14275.71Citrate synthase n=5 Tax=Acidimicrobiaceae bacteri... [more]
A0A6B1E8Z3_9ACTN3.200e-14173.14Citrate synthase n=1 Tax=Acidimicrobiaceae bacteri... [more]
A0A3M2G5C5_ACTSX4.290e-13773.65Citrate synthase (unknown stereospecificity) (Frag... [more]
A0A7K2AM45_9ACTN1.260e-13372.08Citrate synthase (unknown stereospecificity) n=1 T... [more]
A0A7C1UGK0_9ACTN2.140e-13369.29Citrate synthase n=1 Tax=Acidimicrobiales bacteriu... [more]
A0A520XZ65_9ACTN3.010e-11362.14Citrate synthase n=2 Tax=Acidimicrobiales bacteriu... [more]
UPI001F3E05393.290e-10959.65citrate synthase n=1 Tax=Yinghuangia sp. KLBMP8922... [more]
A0A2E0RU48_9ACTN9.020e-10959.22Citrate synthase n=1 Tax=Acidimicrobiaceae bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76520contigM-pyrifera_M_contig76520:148..1017 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score308.5
Seed ortholog evalue3.2e-81
Seed eggNOG ortholog1123258.AQXZ01000018_gene1123
Preferred namecitA
KEGG rclassRC00004,RC00067
KEGG koko:K01647
KEGG ReactionR00351
KEGG Pathwayko00020,ko00630,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map01100,map01110,map01120,map01130,map01200,map01210,map01230
KEGG ModuleM00009,M00010,M00012,M00740
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Citrate synthase, C-terminal domain
EggNOG OGs2GKST@201174,4G8SH@85025,COG0372@1,COG0372@2
EC2.3.3.1
COG Functional cat.C
Best tax levelNocardiaceae
Best eggNOG OGNA|NA|NA
BRITEbr01601,ko00000,ko00001,ko00002,ko01000
Exons1
Model size870
Cds size849
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816664.3691776-CDS-M-pyrifera_M_contig76520:147..9961622816664.3691776-CDS-M-pyrifera_M_contig76520:147..996Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76520 148..996 -
1692278106.3882656-CDS-M-pyrifera_M_contig76520:147..9961692278106.3882656-CDS-M-pyrifera_M_contig76520:147..996Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76520 148..996 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816664.3820386-UTR-M-pyrifera_M_contig76520:996..10171622816664.3820386-UTR-M-pyrifera_M_contig76520:996..1017Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76520 997..1017 -
1692278106.4040782-UTR-M-pyrifera_M_contig76520:996..10171692278106.4040782-UTR-M-pyrifera_M_contig76520:996..1017Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76520 997..1017 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76520.18034.1prot_M-pyrifera_M_contig76520.18034.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76520 148..996 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76520.18034.1

>prot_M-pyrifera_M_contig76520.18034.1 ID=prot_M-pyrifera_M_contig76520.18034.1|Name=mRNA_M-pyrifera_M_contig76520.18034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=283bp
MVTLRVGLLALGDHEGRGSMLDRSDDGLFDDAVRLAAVVPTILGRHHRVR
QGEPPVDPDPTLGQAADYLRMATGVAPDPAAARAVEQYLVATVDHGFNAS
TFTGRVVASTGADMAGSLVAAVGALTGPLHGGAPSRCIQMIDEIGTPDRA
ADWVRDRLDAGDKIMGFGHAVYRAEDPRGVVLREAAEHLGGDLVARAAAI
ETEILAVLADWKPGQRIVTNVEFWASVVLELAGLPRAMFTPTFSVSRSIG
WTAHVIEQHHVGKIVRPSARYVGPEPEVSVAF*
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mRNA from alignment at M-pyrifera_M_contig76520:148..1017-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76520.18034.1 ID=mRNA_M-pyrifera_M_contig76520.18034.1|Name=mRNA_M-pyrifera_M_contig76520.18034.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig76520:148..1017- (Macrocystis pyrifera P11B4 male)
GCGACCCGGGTGGCCGACCCGATGGTGACCCTGCGGGTCGGCCTGTTGGC TCTCGGGGATCATGAAGGCCGCGGCTCGATGCTCGATCGCTCCGACGACG GACTCTTCGACGATGCCGTTCGCCTCGCGGCGGTCGTGCCCACGATCCTC GGCCGCCACCATCGTGTGCGCCAGGGCGAGCCGCCCGTCGATCCCGACCC GACGCTCGGACAGGCCGCCGACTATCTGCGCATGGCGACCGGCGTCGCAC CCGATCCGGCCGCTGCTCGGGCGGTCGAGCAGTACCTCGTGGCCACGGTC GACCATGGCTTCAATGCATCCACGTTCACCGGCCGCGTCGTCGCCAGCAC CGGAGCCGACATGGCGGGCTCACTCGTCGCTGCGGTCGGGGCACTCACCG GGCCCCTGCACGGCGGCGCGCCGAGTCGCTGCATCCAGATGATCGACGAG ATCGGCACGCCCGACCGCGCCGCCGACTGGGTCCGCGACCGGCTCGATGC CGGCGACAAGATCATGGGCTTCGGTCATGCCGTCTACCGGGCCGAGGACC CCCGGGGTGTGGTCCTGCGAGAGGCGGCCGAACACCTCGGCGGCGACCTC GTCGCTCGCGCCGCGGCCATCGAAACGGAGATCCTCGCCGTGCTGGCCGA CTGGAAGCCCGGTCAGCGCATCGTCACCAATGTCGAGTTCTGGGCATCGG TCGTGCTCGAGTTGGCGGGGCTTCCCCGGGCCATGTTCACCCCGACGTTC TCGGTCAGTCGGTCGATCGGATGGACGGCGCACGTGATCGAACAACACCA TGTCGGCAAGATCGTCCGTCCGAGCGCTCGCTACGTCGGACCCGAGCCTG AGGTTTCTGTCGCCTTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76520:148..1017-

>mRNA_M-pyrifera_M_contig76520.18034.1 ID=mRNA_M-pyrifera_M_contig76520.18034.1|Name=mRNA_M-pyrifera_M_contig76520.18034.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1698bp|location=Sequence derived from alignment at M-pyrifera_M_contig76520:148..1017- (Macrocystis pyrifera P11B4 male)
ATGGTGACCCTGCGGGTCGGCCTGTTGGCTCTCGGGGATCATGAAGGCCG
CGGCTCGATGCTCGATCGCTCCGACGACGGACTCTTCGACGATGCCGTTC
GCCTCGCGGCGGTCGTGCCCACGATCCTCGGCCGCCACCATCGTGTGCGC
CAGGGCGAGCCGCCCGTCGATCCCGACCCGACGCTCGGACAGGCCGCCGA
CTATCTGCGCATGGCGACCGGCGTCGCACCCGATCCGGCCGCTGCTCGGG
CGGTCGAGCAGTACCTCGTGGCCACGGTCGACCATGGCTTCAATGCATCC
ACGTTCACCGGCCGCGTCGTCGCCAGCACCGGAGCCGACATGGCGGGCTC
ACTCGTCGCTGCGGTCGGGGCACTCACCGGGCCCCTGCACGGCGGCGCGC
CGAGTCGCTGCATCCAGATGATCGACGAGATCGGCACGCCCGACCGCGCC
GCCGACTGGGTCCGCGACCGGCTCGATGCCGGCGACAAGATCATGGGCTT
CGGTCATGCCGTCTACCGGGCCGAGGACCCCCGGGGTGTGGTCCTGCGAG
AGGCGGCCGAACACCTCGGCGGCGACCTCGTCGCTCGCGCCGCGGCCATC
GAAACGGAGATCCTCGCCGTGCTGGCCGACTGGAAGCCCGGTCAGCGCAT
CGTCACCAATGTCGAGTTCTGGGCATCGGTCGTGCTCGAGTTGGCGGGGC
TTCCCCGGGCCATGTTCACCCCGACGTTCTCGGTCAGTCGGTCGATCGGA
TGGACGGCGCACGTGATCGAACAACACCATGTCGGCAAGATCGTCCGTCC
GAGCGCTCGCTACGTCGGACCCGAGCCTGAGGTTTCTGTCGCCTTCTGAA
TGGTGACCCTGCGGGTCGGCCTGTTGGCTCTCGGGGATCATGAAGGCCGC
GGCTCGATGCTCGATCGCTCCGACGACGGACTCTTCGACGATGCCGTTCG
CCTCGCGGCGGTCGTGCCCACGATCCTCGGCCGCCACCATCGTGTGCGCC
AGGGCGAGCCGCCCGTCGATCCCGACCCGACGCTCGGACAGGCCGCCGAC
TATCTGCGCATGGCGACCGGCGTCGCACCCGATCCGGCCGCTGCTCGGGC
GGTCGAGCAGTACCTCGTGGCCACGGTCGACCATGGCTTCAATGCATCCA
CGTTCACCGGCCGCGTCGTCGCCAGCACCGGAGCCGACATGGCGGGCTCA
CTCGTCGCTGCGGTCGGGGCACTCACCGGGCCCCTGCACGGCGGCGCGCC
GAGTCGCTGCATCCAGATGATCGACGAGATCGGCACGCCCGACCGCGCCG
CCGACTGGGTCCGCGACCGGCTCGATGCCGGCGACAAGATCATGGGCTTC
GGTCATGCCGTCTACCGGGCCGAGGACCCCCGGGGTGTGGTCCTGCGAGA
GGCGGCCGAACACCTCGGCGGCGACCTCGTCGCTCGCGCCGCGGCCATCG
AAACGGAGATCCTCGCCGTGCTGGCCGACTGGAAGCCCGGTCAGCGCATC
GTCACCAATGTCGAGTTCTGGGCATCGGTCGTGCTCGAGTTGGCGGGGCT
TCCCCGGGCCATGTTCACCCCGACGTTCTCGGTCAGTCGGTCGATCGGAT
GGACGGCGCACGTGATCGAACAACACCATGTCGGCAAGATCGTCCGTCCG
AGCGCTCGCTACGTCGGACCCGAGCCTGAGGTTTCTGTCGCCTTCTGA
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