mRNA_M-pyrifera_M_contig7648.18026.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7648.18026.1
Unique NamemRNA_M-pyrifera_M_contig7648.18026.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: M3JU33_CANMX (JmjC domain-containing protein n=1 Tax=Candida maltosa (strain Xu316) TaxID=1245528 RepID=M3JU33_CANMX)

HSP 1 Score: 97.8 bits (242), Expect = 8.730e-22
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 1
Query:    1 PAHCHFTNVSVEALRN--ESVAKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            PA  H   +  E LR   ES A K FP +LK  ++ EVW+E GQMLYLPAGWFHEV+S+      D   HIA+N+WF PP+T+++++ + D YW   W+
Sbjct:  386 PALLHLDELKDEELRTKIESFANKHFPGVLKL-NKMEVWLEPGQMLYLPAGWFHEVSSYGV----DDGVHIAVNYWFIPPSTKDYDKYHTDNYWSEDWE 479          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A0A1D8PN39_CANAL (JmjC domain-containing protein n=2 Tax=Candida albicans TaxID=5476 RepID=A0A1D8PN39_CANAL)

HSP 1 Score: 95.9 bits (237), Expect = 4.700e-21
Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:    1 PAHCHFTNVSVEALRN--ESVAKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESED-SSTHIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            PA  H   +  E++R   ES A K FP +L+  ++ EVW+  G+MLYLPAGWFHEV+SF +   ++    HIA+N+WF PP T  F+  YED YW+  W+
Sbjct:  416 PALLHLDELKDESIRKKIESFANKFFPGVLQL-NKLEVWLNPGEMLYLPAGWFHEVSSFGSDNKDNIGGAHIAINYWFIPPNTTNFDDCYEDTYWKEDWE 514          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A5E279_LODEL (JmjC domain-containing protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5E279_LODEL)

HSP 1 Score: 95.5 bits (236), Expect = 6.870e-21
Identity = 50/109 (45.87%), Postives = 66/109 (60.55%), Query Frame = 1
Query:    1 PAHCHFTNVSVEA-LRNESVAKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGE------SEDSST-----HIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            PA  H   + +E  +R E  A+  FP +L+  ++ EVW++ G+MLYLPAGWFHEV+SF +G        E S T     HIALN+WF PP    FE+ Y+DGYW   WK
Sbjct:  455 PALLHLDEMDLETRIRVEQFAETYFPGVLQL-NKMEVWLDPGEMLYLPAGWFHEVSSFGSGXXXXXXXDEKSQTPGDDVHIALNYWFIPPNGDSFEKSYKDGYWSDDWK 562          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A5DJC5_PICGU (JmjC domain-containing protein n=2 Tax=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) TaxID=294746 RepID=A5DJC5_PICGU)

HSP 1 Score: 91.3 bits (225), Expect = 1.880e-19
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 1
Query:   58 AKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYW 276
            A K +P +L  TSR  VW++ G MLYLPAGWFHEVTSF  G+++D+  HIA+N+WF PP    FE PY+D YW
Sbjct:  399 ANKTYPELL-TTSRYTVWLQKGDMLYLPAGWFHEVTSF--GDNDDN-IHIAINYWFAPPNAHSFEAPYKDNYW 467          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A0A367YGZ3_9ASCO (JmjC domain-containing protein 4 n=1 Tax=Candida viswanathii TaxID=5486 RepID=A0A367YGZ3_9ASCO)

HSP 1 Score: 90.9 bits (224), Expect = 2.620e-19
Identity = 44/100 (44.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:    1 PAHCHFTNVS--VEALRNESVAKKEFPNILKATSRREVWVEA-GQMLYLPAGWFHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            PA  H   ++   +  + +  A+ +FP  L+  ++ EVW++  GQMLYLPAGWFHEV+SF   E +D   HIA+N+WF PP   +F+  YED YW   WK
Sbjct:  385 PALLHLNEITDMEQFAKLKEFAEDKFPGFLEL-NKLEVWLDKPGQMLYLPAGWFHEVSSFGNEEVDDQGVHIAINYWFIPPNKDKFDDCYEDEYWTEDWK 483          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A0A8H8DAW1_9ASCO (JmjC domain-containing protein n=1 Tax=Candida metapsilosis TaxID=273372 RepID=A0A8H8DAW1_9ASCO)

HSP 1 Score: 90.5 bits (223), Expect = 3.860e-19
Identity = 41/81 (50.62%), Postives = 54/81 (66.67%), Query Frame = 1
Query:   58 AKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESED---SSTHIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            A   FP  L+  ++  VW+ +G+MLYLPA WFHEV+SF TG  +D   +  HIALN+WF PP T +FE  Y+D YWE  W+
Sbjct:  434 ANTHFPGFLQL-NQMTVWLNSGEMLYLPASWFHEVSSFGTGNQDDEENTGVHIALNYWFVPPNTDDFENCYKDQYWEQDWQ 513          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A0A1E4SQ36_9ASCO (Clavaminate synthase-like protein n=1 Tax=Suhomyces tanzawaensis NRRL Y-17324 TaxID=984487 RepID=A0A1E4SQ36_9ASCO)

HSP 1 Score: 89.7 bits (221), Expect = 6.940e-19
Identity = 46/99 (46.46%), Postives = 57/99 (57.58%), Query Frame = 1
Query:    1 PAHCHFTNVSVEALRNESV--AKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            P   H         R E V  A K FP  L+  +R  VW+E G MLYLPAGWFHEV+SF  GE +  + H+ALN+WF PP T +  +PY D YW   W+
Sbjct:  398 PGLLHIDEFQDPETRKELVQFAHKHFPGFLEL-NRFTVWLEPGDMLYLPAGWFHEVSSF--GEDDKDNVHVALNYWFIPPNTDDPARPYSDEYWTQDWE 493          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A0A8J5Q8P4_9ASCO (Cupin_8 domain-containing protein n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5Q8P4_9ASCO)

HSP 1 Score: 89.7 bits (221), Expect = 7.250e-19
Identity = 43/102 (42.16%), Postives = 65/102 (63.73%), Query Frame = 1
Query:    1 PAHCHFTNVSVEALRNESV--AKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESEDS---STHIALNFWFHPPTTQEFEQPYEDGYWEHWWK 291
            PA  H  ++     +N+ V  A++ FP  L+  ++  VW+E G+MLYLPAGWFHEV+SF++ E  ++     HIA+N+WF PP + EF++ Y D YW   W+
Sbjct:  392 PALLHLDDIEDVKTKNKIVKFAEEHFPGFLEL-NKYVVWLEPGEMLYLPAGWFHEVSSFASSEGSNNVKDRAHIAINYWFIPPNSDEFKKCYSDSYWTEDWE 492          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: A0A1L0DR85_9ASCO (CIC11C00000000026 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0DR85_9ASCO)

HSP 1 Score: 89.7 bits (221), Expect = 7.400e-19
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1
Query:   58 AKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYWE 279
            A KEFP  L+  ++ EVW+E G MLYLP GWFHEVTS+S   SE  S HIALN+WF PP T E + PY+D YW+
Sbjct:  479 ANKEFPGFLQL-NKMEVWLEPGDMLYLPCGWFHEVTSYS---SELGSAHIALNWWFMPPATSE-DTPYQDDYWK 547          
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Match: G3ANH6_SPAPN (JmjC domain-containing protein n=1 Tax=Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) TaxID=619300 RepID=G3ANH6_SPAPN)

HSP 1 Score: 89.4 bits (220), Expect = 9.670e-19
Identity = 46/98 (46.94%), Postives = 58/98 (59.18%), Query Frame = 1
Query:    1 PAHCHFTNVSVEALRN--ESVAKKEFPNILKATSRREVWVEAGQMLYLPAGWFHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYWEHWW 288
            PA  H   +  + +RN  E+ A + FP  L+  S + VW+E G MLYLPAGWFHEV+SF     +D+  HIALN+WF PP T   E  Y D YW   W
Sbjct:  408 PALLHLDEIDNKDIRNKLETFANEYFPGFLELNSFK-VWLEPGDMLYLPAGWFHEVSSFG---DDDNHGHIALNYWFIPPNTDNVETCYSDMYWHEDW 501          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7648.18026.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
M3JU33_CANMX8.730e-2247.47JmjC domain-containing protein n=1 Tax=Candida mal... [more]
A0A1D8PN39_CANAL4.700e-2146.00JmjC domain-containing protein n=2 Tax=Candida alb... [more]
A5E279_LODEL6.870e-2145.87JmjC domain-containing protein n=1 Tax=Lodderomyce... [more]
A5DJC5_PICGU1.880e-1957.53JmjC domain-containing protein n=2 Tax=Meyerozyma ... [more]
A0A367YGZ3_9ASCO2.620e-1944.00JmjC domain-containing protein 4 n=1 Tax=Candida v... [more]
A0A8H8DAW1_9ASCO3.860e-1950.62JmjC domain-containing protein n=1 Tax=Candida met... [more]
A0A1E4SQ36_9ASCO6.940e-1946.46Clavaminate synthase-like protein n=1 Tax=Suhomyce... [more]
A0A8J5Q8P4_9ASCO7.250e-1942.16Cupin_8 domain-containing protein n=1 Tax=[Candida... [more]
A0A1L0DR85_9ASCO7.400e-1959.46CIC11C00000000026 n=2 Tax=[Candida] intermedia Tax... [more]
G3ANH6_SPAPN9.670e-1946.94JmjC domain-containing protein n=1 Tax=Spathaspora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7648contigM-pyrifera_M_contig7648:335..625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score97.4
Seed ortholog evalue3.8e-18
Seed eggNOG ortholog5476.C4YR01
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0006325,GO:0006338,GO:0006464,GO:0006482,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008214,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016577,GO:0019538,GO:0031974,GO:0031981,GO:0032451,GO:0032452,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0051276,GO:0070013,GO:0070988,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.Cupin-like domain
EggNOG OGs3A2D0@33154,3P2W9@4751,3QTBC@4890,3RR7D@4891,47CC1@766764,COG1226@1,KOG2508@2759
COG Functional cat.I
Best tax levelDebaryomycetaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size291
Cds size291
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816664.0336142-CDS-M-pyrifera_M_contig7648:334..6251622816664.0336142-CDS-M-pyrifera_M_contig7648:334..625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7648 335..625 -
1692278106.2304513-CDS-M-pyrifera_M_contig7648:334..6251692278106.2304513-CDS-M-pyrifera_M_contig7648:334..625Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7648 335..625 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7648.18026.1prot_M-pyrifera_M_contig7648.18026.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7648 335..625 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7648.18026.1

>prot_M-pyrifera_M_contig7648.18026.1 ID=prot_M-pyrifera_M_contig7648.18026.1|Name=mRNA_M-pyrifera_M_contig7648.18026.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
PAHCHFTNVSVEALRNESVAKKEFPNILKATSRREVWVEAGQMLYLPAGW
FHEVTSFSTGESEDSSTHIALNFWFHPPTTQEFEQPYEDGYWEHWWK
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mRNA from alignment at M-pyrifera_M_contig7648:335..625-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7648.18026.1 ID=mRNA_M-pyrifera_M_contig7648.18026.1|Name=mRNA_M-pyrifera_M_contig7648.18026.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig7648:335..625- (Macrocystis pyrifera P11B4 male)
CCAGCGCATTGCCACTTCACGAACGTCTCTGTGGAGGCACTTCGCAACGA GAGCGTCGCTAAGAAAGAGTTCCCTAACATACTAAAGGCCACCAGCAGGA GAGAGGTGTGGGTGGAGGCAGGCCAGATGCTCTACTTGCCCGCAGGTTGG TTCCACGAGGTGACCAGCTTCTCCACCGGCGAGAGCGAAGACAGCAGCAC CCATATCGCTCTCAACTTCTGGTTCCACCCACCCACCACCCAGGAGTTCG AGCAGCCCTACGAGGACGGCTACTGGGAGCATTGGTGGAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7648:335..625-

>mRNA_M-pyrifera_M_contig7648.18026.1 ID=mRNA_M-pyrifera_M_contig7648.18026.1|Name=mRNA_M-pyrifera_M_contig7648.18026.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig7648:335..625- (Macrocystis pyrifera P11B4 male)
CCAGCGCATTGCCACTTCACGAACGTCTCTGTGGAGGCACTTCGCAACGA
GAGCGTCGCTAAGAAAGAGTTCCCTAACATACTAAAGGCCACCAGCAGGA
GAGAGGTGTGGGTGGAGGCAGGCCAGATGCTCTACTTGCCCGCAGGTTGG
TTCCACGAGGTGACCAGCTTCTCCACCGGCGAGAGCGAAGACAGCAGCAC
CCATATCGCTCTCAACTTCTGGTTCCACCCACCCACCACCCAGGAGTTCG
AGCAGCCCTACGAGGACGGCTACTGGGAGCATTGGTGGAAGCCAGCGCAT
TGCCACTTCACGAACGTCTCTGTGGAGGCACTTCGCAACGAGAGCGTCGC
TAAGAAAGAGTTCCCTAACATACTAAAGGCCACCAGCAGGAGAGAGGTGT
GGGTGGAGGCAGGCCAGATGCTCTACTTGCCCGCAGGTTGGTTCCACGAG
GTGACCAGCTTCTCCACCGGCGAGAGCGAAGACAGCAGCACCCATATCGC
TCTCAACTTCTGGTTCCACCCACCCACCACCCAGGAGTTCGAGCAGCCCT
ACGAGGACGGCTACTGGGAGCATTGGTGGAAG
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