mRNA_M-pyrifera_M_contig76438.18019.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A6A2Z3Y3_HIBSY (26S protease regulatory subunit 6B-like protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2Z3Y3_HIBSY) HSP 1 Score: 217 bits (553), Expect = 1.420e-68 Identity = 111/170 (65.29%), Postives = 132/170 (77.65%), Query Frame = 1 Query: 1 ASEEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 A E+DLY ++K L+ +L+F KRIQSVPLVIGQF+EM+D+N+GI+GSTTGS+ YVRILST+NRE LKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 36 AEEDDLYCRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINREMLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 205
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A059DA28_EUCGR (AAA domain-containing protein (Fragment) n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059DA28_EUCGR) HSP 1 Score: 220 bits (560), Expect = 2.100e-68 Identity = 124/170 (72.94%), Postives = 144/170 (84.71%), Query Frame = 1 Query: 1 ASEEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 A EEDLY+++K LE +L+F XXXXXXXXXXX KRIQSVPLVIGQF+EM+D+N+GI+GSTTGS+ YVRILST+NRE LKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 31 AEEEDLYSRLKSLERQLEFIDIQEXXXXXXXXXXXRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 200
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A6P6FYT9_ZIZJJ (26S proteasome regulatory subunit 6B homolog n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6P6FYT9_ZIZJJ) HSP 1 Score: 216 bits (550), Expect = 3.810e-68 Identity = 110/168 (65.48%), Postives = 132/168 (78.57%), Query Frame = 1 Query: 7 EEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 E+DLY+++K L+ +L+F KRIQSVPLVIGQF+EM+D+N+GI+GSTTGS+ YVRILST+NRE LKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 39 EDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 206
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A059DAH8_EUCGR (AAA domain-containing protein (Fragment) n=17 Tax=Mesangiospermae TaxID=1437183 RepID=A0A059DAH8_EUCGR) HSP 1 Score: 220 bits (560), Expect = 4.380e-68 Identity = 124/170 (72.94%), Postives = 144/170 (84.71%), Query Frame = 1 Query: 1 ASEEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 A EEDLY+++K LE +L+F XXXXXXXXXXX KRIQSVPLVIGQF+EM+D+N+GI+GSTTGS+ YVRILST+NRE LKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 31 AEEEDLYSRLKSLERQLEFIDIQEXXXXXXXXXXXRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 200
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A6U9RSE9_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9RSE9_9CHLO) HSP 1 Score: 220 bits (561), Expect = 8.920e-68 Identity = 139/166 (83.73%), Postives = 152/166 (91.57%), Query Frame = 1 Query: 13 DLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 DLYT+MK+L+ +L+FXXXXXXXXXXXXXXXXXXXXXXX KRIQSVPLVIGQFLEM+D N GIIGSTTGS+ YVRILSTLNRE LKPSSSVALH+HSN+LV ILPPEADSSI L+T E+PDV YSDIGG DIQKQEIREAVELPLTHF+LY+QIGIDPPRGVLL Sbjct: 30 DLYTKMKLLQRQLEFXXXXXXXXXXXXXXXXXXXXXXXEEVKRIQSVPLVIGQFLEMVDTNSGIIGSTTGSNYYVRILSTLNRELLKPSSSVALHRHSNALVDILPPEADSSISLMTDSERPDVTYSDIGGNDIQKQEIREAVELPLTHFELYRQIGIDPPRGVLL 195
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A2K1JGX3_PHYPA (AAA domain-containing protein n=7 Tax=Embryophyta TaxID=3193 RepID=A0A2K1JGX3_PHYPA) HSP 1 Score: 220 bits (561), Expect = 1.070e-67 Identity = 114/168 (67.86%), Postives = 131/168 (77.98%), Query Frame = 1 Query: 7 EEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 EEDLYT+ K+L +L+F KRIQSVPLVIGQF+EM+D+N+GI+GSTTGS+ YVRILST+NRE LKPSSSVALH+HSN+LV +LPPEADSSI LLTQ E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 35 EEDLYTRQKLLMRQLEFLDIQEEYIKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFIEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSSSVALHRHSNALVDVLPPEADSSISLLTQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 202
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A0D3B2V2_BRAOL (AAA domain-containing protein n=9 Tax=Brassica TaxID=3705 RepID=A0A0D3B2V2_BRAOL) HSP 1 Score: 220 bits (560), Expect = 1.100e-67 Identity = 112/170 (65.88%), Postives = 133/170 (78.24%), Query Frame = 1 Query: 1 ASEEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 + EED Y+++K LE +L+F KRIQSVPLVIGQF+EM+D+N+GI+GSTTGS+ YVRILST+NREDLKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 21 SDEEDPYSRLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINREDLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 190
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: C1E6M9_MICCC (AAA domain-containing protein n=7 Tax=Mamiellaceae TaxID=41873 RepID=C1E6M9_MICCC) HSP 1 Score: 220 bits (561), Expect = 1.190e-67 Identity = 114/169 (67.46%), Postives = 131/169 (77.51%), Query Frame = 1 Query: 4 SEEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 SEEDLY+++K L+ L+F KRIQ+VPLVIGQFLEM+DEN GI+ STTGS+ YVRILSTLNRE LKPSSSVALH+HSN+LV ILPPEADSSI LL+ E+PDV+YSD+GG D+QKQEIREAVELPLTHFDLY+QIGIDPPRGVLL Sbjct: 38 SEEDLYSRLKELQRELEFVEIQEEYVKDEQKNLKIELLRAQEEVKRIQAVPLVIGQFLEMVDENAGIVSSTTGSNYYVRILSTLNRELLKPSSSVALHRHSNALVDILPPEADSSISLLSDAERPDVKYSDVGGMDVQKQEIREAVELPLTHFDLYRQIGIDPPRGVLL 206
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: A0A5N6NUH5_9ASTR (AAA domain-containing protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A5N6NUH5_9ASTR) HSP 1 Score: 219 bits (557), Expect = 1.270e-67 Identity = 112/169 (66.27%), Postives = 133/169 (78.70%), Query Frame = 1 Query: 4 SEEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 SE+DLYT++K L+ +++F KRIQSVPLVIGQF+EMID+N+GI+GSTTGS+ YVRILST+NRE LKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH +LYKQIGIDPPRGVLL Sbjct: 27 SEDDLYTRLKSLQRQIEFIEIQEEYVKDELKNLNRELLRSQEEVKRIQSVPLVIGQFMEMIDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLL 195
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Match: UPI00051AFBAE (26S proteasome regulatory subunit 6B homolog n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI00051AFBAE) HSP 1 Score: 214 bits (546), Expect = 1.540e-67 Identity = 111/168 (66.07%), Postives = 130/168 (77.38%), Query Frame = 1 Query: 7 EEDLYTQMKVLEERLQFXXXXXXXXXXXXXXXXXXXXXXXXXXKRIQSVPLVIGQFLEMIDENHGIIGSTTGSSNYVRILSTLNREDLKPSSSVALHKHSNSLVGILPPEADSSIQLLTQGEQPDVRYSDIGGADIQKQEIREAVELPLTHFDLYKQIGIDPPRGVLL 510 E+DLY ++K L+ +L+F KRIQSVPLVIGQF+EMID+N+ I+GSTTGS+ YVRILST+NRE LKPS+SVALH+HSN+LV +LPPEADSSI LL+Q E+PDV Y+DIGG DIQKQEIREAVELPLTH DLYKQIGIDPPRGVLL Sbjct: 33 EDDLYGRLKSLQRQLEFIDIQEEYVKDELKNLRRENLRAQEEVKRIQSVPLVIGQFMEMIDQNNAIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYTDIGGCDIQKQEIREAVELPLTHHDLYKQIGIDPPRGVLL 200 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76438.18019.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76438.18019.1 >prot_M-pyrifera_M_contig76438.18019.1 ID=prot_M-pyrifera_M_contig76438.18019.1|Name=mRNA_M-pyrifera_M_contig76438.18019.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp MKVLEERLQFLEPQEEFLKEEQKNLKRELLRAQEEVKRIQSVPLVIGQFLback to top mRNA from alignment at M-pyrifera_M_contig76438:520..1029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76438.18019.1 ID=mRNA_M-pyrifera_M_contig76438.18019.1|Name=mRNA_M-pyrifera_M_contig76438.18019.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig76438:520..1029+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76438:520..1029+ >mRNA_M-pyrifera_M_contig76438.18019.1 ID=mRNA_M-pyrifera_M_contig76438.18019.1|Name=mRNA_M-pyrifera_M_contig76438.18019.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig76438:520..1029+ (Macrocystis pyrifera P11B4 male)back to top |