mRNA_M-pyrifera_M_contig76435.18018.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A7Y4WZH0_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A7Y4WZH0_9BACT) HSP 1 Score: 133 bits (335), Expect = 3.910e-32 Identity = 85/223 (38.12%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 1 SCVTSLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXSWTAD-GSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITSLNS--GVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXSWTAD-GSTYLVYVTGYSTNTGEFVLT 657 +CVT+L+T GGVWYT NGA STC G +D+K+ VF+ ++TA+ G+TY + VTG+ TG F L+ T+ +P ND+C+ AI I + T G+TTD++ T C+T+LN+ GVWY + S +S CG + YDTK+ +F C +CVTG D ++ + G TY + VTG+STNTG F LT Sbjct: 296 TCVTTLNTAGGVWYTFV-GNGAPNTISTCTGTAYDSKIGVFSGSCGSLICVTGNDDACGLQSSVTFTANTGTTYYVLVTGFGSATGAFTLTRTSVLP---NDLCTGAITINCGQTITGSTACGATTDAVAT--CVTALNTAPGVWYRFV-GDASPVTLSLCGSS-YDTKIGVFTGTCTALTCVTGNDDFCGVQSQVTFNTNAGVTYYILVTGFSTNTGNFTLT 510
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A7Y2YCW7_9GAMM (Uncharacterized protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2YCW7_9GAMM) HSP 1 Score: 123 bits (308), Expect = 1.500e-28 Identity = 84/233 (36.05%), Postives = 121/233 (51.93%), Query Frame = 1 Query: 4 CVTSLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXS--WTADGSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITSLNS-GVWYTITPAEGSETIVSTC-------GGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXX-----SW-TADGSTYLVYVTGYSTNTGEFVL 654 C TS +T GVWY+++ G+ ++ASTC+ A++DTKL+ F W ADG L+ V G+ TGDFDL+VT VP P NDVC +AI G +V+G+T +T D C TS+ + G+WY + G+ STC GGA+YDTK++++ C+V+ C+ G D W T G+TY V V G+S++TG+F L Sbjct: 623 CGTS-NTAPGVWYSVSAPAGSVIIASTCNQANYDTKLSAFNGECGDLECIAGNDDTAGCLFTTELLWAADGDEDLLLVHGFGTATGDFDLTVTCEVP-PENDVCEDAIGPLVAGDIVSGSTTLATLDEPPDIDCGTSVTAPGIWYEVL-GTGNTMTASTCNDGDPATGGANYDTKISVYCADCEVKECIGGQDDNFGAGCAGFTTKFDWPTQAGATYKVLVHGFSSSTGDFDL 852
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A3M1TYJ3_9BACT (T9SS C-terminal target domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1TYJ3_9BACT) HSP 1 Score: 117 bits (292), Expect = 2.070e-26 Identity = 83/222 (37.39%), Postives = 109/222 (49.10%), Query Frame = 1 Query: 31 GVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXSW----TADGSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCIT-----SLNSGVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXSW----TADGSTYLVYVTGYSTNTGEFVLT 657 GVWYTI NG + ASTCD A++DTK+ V++ S + G TY IYV G + GDF LS++ P NDVCS AI I+ G V+ G T ST+ + T C SL G+WY +T G +STCG A++DTK+ +F CD C G D S+ T G TY VY++G++ TGEF LT Sbjct: 574 GVWYTIV-GNGQIITASTCDQANYDTKINVYSGSCDTLNCVAGNNDNFNCSDGSSKVDFVSEAGKTYYIYVNGNNGQRGDFTLSISCNDPSD-NDVCSKAIPISC-GDVIMGNTEFSTSAGVPATDCEAGPFDDSLGPGIWYVLT-GTGENVTLSTCGEANFDTKIDVFTGSCDSLVCYAGNDDGNGCAGFTSFLNMPTVAGETYYVYLSGFAGATGEFTLT 791
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A356FES8_9BACT (Dockerin domain-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A356FES8_9BACT) HSP 1 Score: 113 bits (283), Expect = 2.820e-26 Identity = 74/221 (33.48%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 13 SLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXSWTAD-GSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAI--EIAATGGVVAGTTVGSTTDSLLTTTCITSLNSGVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXSWTA-DGSTYLVYVTGYSTNTGEFVLTAN 663 S T G+WY++T G+ + AS C G+++DTK++VF+ SW + G+TYL+ V G+ +GDF L+V A + + ND C AI ++A VV G+TV T + C S G+WY+ G CG +DYDTK+++F+ C SCV D W + DG+TY + V G+ST +G F+LT + Sbjct: 36 SASTAPGLWYSVTGVGGS-MTASLC-GSNYDTKISVFSGACGGVTCVASNDDSCGLQSVASWVPEEGATYLVLVHGFGSSSGDFTLTVEAVLAMQDNDDCGGAIGLDLATGQAVVEGSTVTGATPDAESGDCGASTAPGIWYSAV-GNGGTMSAGLCG-SDYDTKISVFSGDCGALSCVASNDDSCGLQSVAGWDSEDGATYRILVHGFSTRSGNFILTVD 252
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: UPI002004AC5B (T9SS type A sorting domain-containing protein n=1 Tax=Subsaxibacter sp. CAU 1640 TaxID=2933271 RepID=UPI002004AC5B) HSP 1 Score: 110 bits (276), Expect = 2.820e-24 Identity = 85/243 (34.98%), Postives = 119/243 (48.97%), Query Frame = 1 Query: 1 SCVTSLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXSWTAD-------GSTYLIYVTGYSDYT---GDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITSLNS--GVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXX-SWTAD---------GSTYLVYVTGYSTNTGEFVLTAN 663 +C +++ GVWY + G ++ASTC+G +FDT +AVF+ + ++ GSTY I+VT +S +T G F LS+T A P P N C +A+ I+ G G+TVG + TC+TSLN+ G +Y + GS+ V+TCG + YDTKL IF C CV G D S+T G+ Y +YVTGYS+N G FVL N Sbjct: 782 ACGPTINDMPGVWYKV-QGTGYSIIASTCEGTNFDTVIAVFSGDCGSISCYANDDDSCDGGVGSTLASEVEFETQLGSTYYIFVTPFSSFTSNPGPFTLSLTCAGPPPPNQACLDAVGISC-GQSTTGSTVGYEINDF--DTCVTSLNTAPGRFYKV-EGTGSDITVNTCGSS-YDTKLGIFRGDCAGLICVAGNDDAPSSAYCGGSFTTQSSVTFSSQAGTVYYIYVTGYSSNAGNFVLNVN 1018
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A6N6KCM4_9BACT (HYR domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KCM4_9BACT) HSP 1 Score: 106 bits (265), Expect = 9.090e-23 Identity = 80/237 (33.76%), Postives = 117/237 (49.37%), Query Frame = 1 Query: 1 SCVTSLDTTGGVWYTITPANGAEVVASTCD-GADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXSWTAD-----GSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITSLNS--GVWYTITPAEGSETIVSTCG-GADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXSWTAD-----GSTYLVYVTGYSTNTGEFVLTANVT 669 +C T + GGVWY G ++ +TC+ G+++DTKL VF T + G+ Y IYVTG+S TG+F++S++ P DVCS+A++I+ G VV G T +T D L C T S G+WY T G + V+TC G++YDTKL +F C +C+TG D T + G+ Y +YVTGYS+ TG + ++ T Sbjct: 260 NCGTGSTSAGGVWYHFA-GTGQDIEVTTCNAGSNYDTKLFVFTGSCGSLTCVTGNDDSSCGFSSVRSTVNFSSIPGTDYFIYVTGFSSATGNFEMSISCTTP---GDVCSDALDISC-GDVVTGNTSIATGDGSLPF-CGTGSTSAGGIWYHFT-GTGDDVEVTTCNAGSNYDTKLFVFTGSCGSLTCLTGNDDSSCGFSGLRSTVNFSSVPGTNYYIYVTGYSSATGNYEMSLTCT 489
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A7Y2VJ45_9GAMM (Uncharacterized protein n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2VJ45_9GAMM) HSP 1 Score: 105 bits (262), Expect = 1.380e-22 Identity = 80/232 (34.48%), Postives = 113/232 (48.71%), Query Frame = 1 Query: 4 CVTSLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXS---WTADGSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITSLNS-GVWYTITPAEGSETIVSTC-------GGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXS---W-TADGSTYLVYVTGYSTNTGEFVL 654 C TS +T GVWY++ V ASTC+ AD+DTKL+V+ + W G + V G+ TG+FDL+VT ND+C NA +G V+AGTT +T D C TS+ + GVWY + G+ STC GGA+YDTK++++ C+V+ C+TG D + W T +G TY V V G+ + TG+F L Sbjct: 108 CGTS-NTAPGVWYSVNHLG--IVTASTCNQADYDTKLSVYGGTCDELECIAGNDDTAGCGGFTTELTWGGSGEDEKLLVHGFGSSTGNFDLTVTCE-DYAENDLCENASGPLVSGDVIAGTTTTATLDEPPDIDCGTSVTAPGVWYDVI-GTGTTMTASTCNDGDPGTGGANYDTKISVYCADCEVKECITGNDDTSGCSGFSTQLDWPTQEGRTYKVLVHGFGSATGDFDL 334
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: A0A848T2J5_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=A0A848T2J5_9BACT) HSP 1 Score: 90.1 bits (222), Expect = 4.450e-17 Identity = 76/228 (33.33%), Postives = 109/228 (47.81%), Query Frame = 1 Query: 1 SCVTSLDTTGGVWYTITPANGAEVVASTCDG-ADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXSWTAD-GSTYLIYVTGYSDYTGDFDLSVTAAVPVPG---NDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITSLNS-GVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXSW----TADGSTYLVYVTGYSTNTGEFVL 654 +C TS+ T G+WYT+T +G+ + TC G ++DTKL V++ ++T+ G+ Y IYV+GYS+ +GDF L V+ P ND C NAI I G ++G+T +T TC + S GVWYT G VSTCG A +DT++++F C +CV G D S T G+ Y + V G+ G F L Sbjct: 959 TCGTSV-TGKGIWYTMTGIDGS-ITIKTCGGITNYDTKLHVYSGSCGSFTCVTGNDDNCNLQSSVTFTSILGTNYFIYVSGYSNNSGDFSLDVSCTYTSPPSEPNDSCMNAIAINC-GDTLSGSTANATISQ--GGTCGPPITSPGVWYTHN-GTGLNATVSTCGMASFDTRISVFTGTCGSLTCVGGNDDYNGCGTNTSQYTFGTNLGTQYYILVHGFQNAVGNFDL 1180
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: UPI001F48D85E (T9SS type A sorting domain-containing protein n=1 Tax=Portibacter sp. 10MBP4-2-1 TaxID=2898660 RepID=UPI001F48D85E) HSP 1 Score: 87.4 bits (215), Expect = 3.550e-16 Identity = 69/224 (30.80%), Postives = 95/224 (42.41%), Query Frame = 1 Query: 1 SCVTSLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXX-----SWTAD-GSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCITS-----LNSGVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXXSW----TADGSTYLVYVTGY 627 +C TS+ G VWY I G + AS C+ A+FDTK+ + SW + G Y IYV G+ TGDF L + P ND+C NAI + V T + D + + C L+ GVWYTI G +STCG ADYD+K+ ++ C C G + S T +G TY +YV+G+ Sbjct: 592 TCGTSISAPG-VWYNIV-GTGEFITASVCNLANFDTKIIIIQADDCNSDLFCVAGNDDGPECLGFTSEVSWLGEQGVNYYIYVNGFDGETGDFTLLINCNAPAE-NDLCENAISLDCVDSVEGSTNFATDRDQVGDSDCSDDVFSDLLSPGVWYTI-EGLGKPITLSTCGTADYDSKIDVYTGECGNLVCYAGNEDGPGCPDFTSELTFDTEEGVTYHIYVSGF 811
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Match: UPI002006C39B (CUB domain-containing protein n=1 Tax=Subsaxibacter sp. CAU 1640 TaxID=2933271 RepID=UPI002006C39B) HSP 1 Score: 86.7 bits (213), Expect = 6.510e-16 Identity = 66/230 (28.70%), Postives = 115/230 (50.00%), Query Frame = 1 Query: 13 SLDTTGGVWYTITPANGA-EVVASTCDGADFDTKLAVFAXXXXXXXXXXXXXXXXXXXXXXS----WTADGSTYLIYVTGYSDYTGDFDLSVTAAVPVPGNDVCSNAIEIAATGGVVAGTTVGSTTDSLLTTTCIT-SLNS--GVWYTITPAEGSETIVSTCGGADYDTKLAIFADGCDVQSCVTGVDXXXXXXXXX---SWTADGSTYLVYVTGYSTNTGEFVLTANVT 669 SL++ GVW+T T G+ +++ + G++FDT+LA+ + S A G+TY IY+T + +G+++L++T P P ND+C+NA + G + G+T +T ++TC + SLN+ GVW+ + G++ I G+++DT L +++ C SC+ D + +TY YVTGYST++G + + N T Sbjct: 591 SLNSGPGVWHTYTNGTGSSKLIRVSTVGSNFDTRLAILSGSCGALSCVTANDNGPTGVTPQSELTFTAAAGTTYRIYITAATGVSGNYNLTLTEIFP-PANDLCANATTMTL-GQTLTGSTSSATLTGAPSSTCSSNSLNTAPGVWFRYV-SSGAQQISVDTEGSNFDTILGVYSGSCGTLSCIASNDDTLTNSQSRVVFTTNTSPTTYYFYVTGYSTDSGNYTINLNNT 817 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76435.18018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76435.18018.1 >prot_M-pyrifera_M_contig76435.18018.1 ID=prot_M-pyrifera_M_contig76435.18018.1|Name=mRNA_M-pyrifera_M_contig76435.18018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp SCVTSLDTTGGVWYTITPANGAEVVASTCDGADFDTKLAVFADGCDVQTCback to top mRNA from alignment at M-pyrifera_M_contig76435:17..755+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76435.18018.1 ID=mRNA_M-pyrifera_M_contig76435.18018.1|Name=mRNA_M-pyrifera_M_contig76435.18018.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=739bp|location=Sequence derived from alignment at M-pyrifera_M_contig76435:17..755+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76435:17..755+ >mRNA_M-pyrifera_M_contig76435.18018.1 ID=mRNA_M-pyrifera_M_contig76435.18018.1|Name=mRNA_M-pyrifera_M_contig76435.18018.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig76435:17..755+ (Macrocystis pyrifera P11B4 male)back to top |