mRNA_M-pyrifera_M_contig76378.18008.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76378.18008.1
Unique NamemRNA_M-pyrifera_M_contig76378.18008.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A5A8DWF7_CAFRO (N-acetyltransferase domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DWF7_CAFRO)

HSP 1 Score: 136 bits (342), Expect = 2.460e-34
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 1
Query:   10 LADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSV--HPRK--------------WTVFWRNIPDDTILPAIQAAIDIPPTFS 444
            L DLLE +F K LP  +F D    ++SI  +ES RG AIVT          +  +AYLDKFAV P+AQG++LG+ +++ALV+ EPKLFWRSRS+NR+N WYF RA G+Y       PRK              WTVFWR + D  IL A++AA  + PTF+
Sbjct:  613 LKDLLEQAFGKRLPDGYFDDRAQRLRSIYASESMRGAAIVTT---------ENGIAYLDKFAVSPSAQGDKLGDDVWQALVEGEPKLFWRSRSDNRVNGWYFSRAHGSYTAPPIEDPRKAAEAADAYGHAPGYWTVFWRGLGDSDILDAVRAAHAMAPTFT 764          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A0L0G2D2_9EUKA (N-acetyltransferase domain-containing protein n=2 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G2D2_9EUKA)

HSP 1 Score: 132 bits (331), Expect = 2.190e-33
Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = 1
Query:    1 LPQLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPDDTILPAIQAAIDIPPTFS 444
            LP +  +LE SF+ P+P S+F  I+   +S+ V ESGRG AIV    +T+       + YLDK AV   +QG++LGE++++AL + EP LFWRSRS N  N WY+ RA GA K    P  WTVFW N+  D I+  ++ AI + PTFS
Sbjct:  373 LPAVKAVLEGSFRSPIPDSYFESIQDSFRSLYVTESGRGIAIV----LTIG-----GIPYLDKIAVQQGSQGDQLGEQIWQALTKGEPSLFWRSRSSNSANNWYYDRAHGAIKDQKSP--WTVFWYNVDTDKIMECVKKAIGLKPTFS 509          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A482R962_9ARCH (N-acetyltransferase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R962_9ARCH)

HSP 1 Score: 120 bits (301), Expect = 3.110e-31
Identity = 63/154 (40.91%), Postives = 96/154 (62.34%), Query Frame = 1
Query:    1 LPQLADLLEASFQKPLPPSFFTDIKPMV-------KSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPDDTILPAIQAAIDIPPTF 441
            LP+L  L+E++F+  LP S+F  +   V       + + ++E+ RG AIVT             +AYLDKFAV PAAQG++LG+ L++ +V  E  L+WRSRS NR+NPWY++++ G +K       WTVFWR++ +  ++PAI  A+ + PTF
Sbjct:   41 LPRLKALVESAFRATLPDSYFASLMAEVAPGQRRLRRLFLSENYRGVAIVTEEAGL------PGVAYLDKFAVAPAAQGDKLGDVLWQQMVSMEGGLYWRSRSTNRVNPWYYEQSSGCFKNRAGD--WTVFWRDLDECHVMPAISTALGLAPTF 186          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A1I1ZYB7_9DELT (Acetylglutamate kinase n=3 Tax=Nannocystis TaxID=53 RepID=A0A1I1ZYB7_9DELT)

HSP 1 Score: 107 bits (268), Expect = 9.960e-25
Identity = 66/148 (44.59%), Postives = 87/148 (58.78%), Query Frame = 1
Query:    1 LPQLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPD-DTILPAIQAAIDIPPTF 441
            LP+LA LL A+F +P    +FT  KP  + I +A+S R  AI+T+         +  + YLDKFAV   AQGE +G  L+  + +  PKLFWR+R +N INPWYFQRADG+Y        WTVFW  I D  TI   ++ A+  PPT 
Sbjct:  300 LPRLAGLLTAAFGRPPVADYFTR-KPF-RRIYLADSYRAAAILTD---------EGPIPYLDKFAVTGEAQGEGIGGSLWLRMTRETPKLFWRARVDNPINPWYFQRADGSYTGGA----WTVFWTGITDFPTIQECVERALAAPPTL 432          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A0K1EH20_CHOCO (Acetylglutamate kinase n=2 Tax=Chondromyces TaxID=50 RepID=A0A0K1EH20_CHOCO)

HSP 1 Score: 104 bits (259), Expect = 1.910e-23
Identity = 61/146 (41.78%), Postives = 86/146 (58.90%), Query Frame = 1
Query:    7 QLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPD-DTILPAIQAAIDIPPTF 441
            +L+DLLE+SF +  P   +  +KP  + I +++S R  AI+T          +  + YLDKFAV   AQGE +G  L+  + +  PKLFWR+R +N +NPWYFQRADG+Y       KWTVFW  I D D I   ++ A+ +P T 
Sbjct:  307 RLSDLLESSFGR-RPVMDYFKVKPFFR-IYLSDSYRAGAILTT---------ESGVPYLDKFAVTAEAQGEGIGGSLWLRMARENPKLFWRARIDNEVNPWYFQRADGSYSNE----KWTVFWYGISDFDEIRACVERALSMPATL 437          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A7V2WR94_9GAMM (Acetylglutamate kinase n=1 Tax=Oceanospirillales bacterium TaxID=1914300 RepID=A0A7V2WR94_9GAMM)

HSP 1 Score: 102 bits (254), Expect = 1.030e-22
Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 1
Query:    7 QLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPDDTILPAIQAA 420
            +L  LLE +F K L P+FF +IK  +KSI ++ESG+  A+VT        E  +   YL+KFAV P AQG+ LG+ ++E ++   P+++WRSRS N+IN WY+++AD +YKQ      W VF   +P    L  +Q A
Sbjct:  323 KLISLLENTFGKRLKPNFFAEIK--LKSIFISESGQAVALVT--------EGHDGKPYLNKFAVTPQAQGQGLGKAIWEQMLLIYPQIYWRSRSTNKINSWYYKQADCSYKQD----NWIVFSCGMPLPQALDCLQVA 446          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A4P2PTB8_SORCE (Acetylglutamate kinase n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A4P2PTB8_SORCE)

HSP 1 Score: 100 bits (249), Expect = 4.880e-22
Identity = 60/146 (41.10%), Postives = 81/146 (55.48%), Query Frame = 1
Query:    7 QLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPD-DTILPAIQAAIDIPPTF 441
            +L  LLEA FQ+ L PS+F   K     I +++S R  AI+T       P    S+ YLDKFAV   AQG  +G  L+  +    P LFWR+R+ N +NPWYFQ+A+G+Y+       WTVFW  +P  D I   I  A+ +P T 
Sbjct:  307 RLRGLLEACFQRALDPSYFE--KKRFYRIYLSDSYRATAILTLDSSGKGP----SIPYLDKFAVTTEAQGVGIGGSLWTRMKNENPALFWRARNGNEVNPWYFQQAEGSYRNDT----WTVFWYGLPGFDDIHACIDHALSLPATL 442          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A0A358V251_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A358V251_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 1.650e-21
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    7 QLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPDDTILPAIQAAIDIPPTF 441
            +L  L++ +F + L  S+FT  K   K+I+V    +G  IV         +  E L YLDKFAV P A+GE +   L++ L+      FWRSR +N IN WYF++A G  K      KW VFWRN+ +  I  AI+ A  I PT 
Sbjct:  141 RLRALIQKAFGRSLIRSYFTKQKEKFKTIIVDPDYKGAVIV---------KEVEGLNYLDKFAVRPEARGEGIATDLWQMLLHHHDSFFWRSRPDNSINGWYFEKASGCVKTD----KWFVFWRNLTEAEINKAIELAQAIKPTL 272          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: A9GL61_SORC5 (Acetylglutamate kinase n=10 Tax=Sorangium cellulosum TaxID=56 RepID=A9GL61_SORC5)

HSP 1 Score: 98.6 bits (244), Expect = 2.370e-21
Identity = 63/147 (42.86%), Postives = 84/147 (57.14%), Query Frame = 1
Query:    7 QLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLA-YLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPD-DTILPAIQAAIDIPPTF 441
            +L DLLEA FQ+ L   +F D KP  + I +++S R  AI+T     L P  +  L  YLDKFAV   AQG  +G  L+  +    PKLFWR+R+ N INPWYFQ+A+G+Y+       WTVFW  +   D I   I  A+ +P T 
Sbjct:  303 RLRDLLEACFQRKLDEHYF-DKKPFYR-IYLSDSYRATAILT-----LDPGGRAPLTPYLDKFAVTSEAQGVGIGGSLWTRMKSENPKLFWRARNGNEINPWYFQQAEGSYRNE----NWTVFWYGLSSFDDIRACIDHALCLPATL 438          
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Match: UPI0003F08653 (N-acetylglutamate synthase, mitochondrial-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F08653)

HSP 1 Score: 92.8 bits (229), Expect = 2.960e-21
Identity = 49/142 (34.51%), Postives = 81/142 (57.04%), Query Frame = 1
Query:   19 LLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTLSPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRINPWYFQRADGAYKQSVHPRKWTVFWRNIPDDTI-LPAIQAAIDIPPTF 441
            LL  +F + L   +FT++   + ++ ++E+   CA++T        E + ++ YLDKFAV   +QGE   E L+E++ +    LFWRSRS N INPWYF+R++G++       +WTVFW  + D  +    +  A  +P +F
Sbjct:    4 LLTRAFGRMLSKDYFTNLGDRLHTLYLSENFNACAVITQ-------ENEVAVPYLDKFAVSAHSQGEGTSEMLWESVRKDFKSLFWRSRSSNMINPWYFKRSEGSWSNG----EWTVFWYGVSDPKVSYELVDYAASLPSSF 134          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76378.18008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DWF7_CAFRO2.460e-3447.20N-acetyltransferase domain-containing protein n=3 ... [more]
A0A0L0G2D2_9EUKA2.190e-3345.95N-acetyltransferase domain-containing protein n=2 ... [more]
A0A482R962_9ARCH3.110e-3140.91N-acetyltransferase domain-containing protein (Fra... [more]
A0A1I1ZYB7_9DELT9.960e-2544.59Acetylglutamate kinase n=3 Tax=Nannocystis TaxID=5... [more]
A0A0K1EH20_CHOCO1.910e-2341.78Acetylglutamate kinase n=2 Tax=Chondromyces TaxID=... [more]
A0A7V2WR94_9GAMM1.030e-2242.03Acetylglutamate kinase n=1 Tax=Oceanospirillales b... [more]
A0A4P2PTB8_SORCE4.880e-2241.10Acetylglutamate kinase n=2 Tax=Sorangium cellulosu... [more]
A0A358V251_9BACT1.650e-2139.31Uncharacterized protein n=1 Tax=bacterium TaxID=18... [more]
A9GL61_SORC52.370e-2142.86Acetylglutamate kinase n=10 Tax=Sorangium cellulos... [more]
UPI0003F086532.960e-2134.51N-acetylglutamate synthase, mitochondrial-like n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76378contigM-pyrifera_M_contig76378:581..1027 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score137.1
Seed ortholog evalue6.6e-30
Seed eggNOG ortholog72019.SARC_04509T0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.N-acetyl-gamma-glutamyl-phosphate reductase activity
EggNOG OGs38FTK@33154,COG0548@1,KOG2436@2759
COG Functional cat.E
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size447
Cds size447
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816663.1667733-CDS-M-pyrifera_M_contig76378:580..10271622816663.1667733-CDS-M-pyrifera_M_contig76378:580..1027Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76378 581..1027 -
1692278105.7141435-CDS-M-pyrifera_M_contig76378:580..10271692278105.7141435-CDS-M-pyrifera_M_contig76378:580..1027Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76378 581..1027 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76378.18008.1prot_M-pyrifera_M_contig76378.18008.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76378 581..1027 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76378.18008.1

>prot_M-pyrifera_M_contig76378.18008.1 ID=prot_M-pyrifera_M_contig76378.18008.1|Name=mRNA_M-pyrifera_M_contig76378.18008.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
LPQLADLLEASFQKPLPPSFFTDIKPMVKSILVAESGRGCAIVTNRQVTL
SPERKESLAYLDKFAVHPAAQGEELGERLYEALVQAEPKLFWRSRSENRI
NPWYFQRADGAYKQSVHPRKWTVFWRNIPDDTILPAIQAAIDIPPTFS*
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mRNA from alignment at M-pyrifera_M_contig76378:581..1027-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76378.18008.1 ID=mRNA_M-pyrifera_M_contig76378.18008.1|Name=mRNA_M-pyrifera_M_contig76378.18008.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=447bp|location=Sequence derived from alignment at M-pyrifera_M_contig76378:581..1027- (Macrocystis pyrifera P11B4 male)
TTGCCTCAACTTGCAGATCTCTTGGAAGCCTCTTTCCAAAAGCCTCTTCC ACCTTCCTTCTTCACAGACATCAAACCAATGGTCAAATCCATCCTTGTCG CAGAGTCTGGCAGAGGTTGTGCAATTGTTACAAATCGACAAGTTACACTC TCTCCAGAAAGAAAAGAATCTCTTGCTTACCTTGACAAATTCGCTGTGCA TCCTGCAGCGCAAGGAGAAGAATTGGGAGAACGGTTGTATGAAGCGCTTG TCCAAGCTGAACCAAAGCTCTTTTGGAGATCTAGATCCGAGAATAGAATC AACCCTTGGTATTTTCAAAGAGCTGATGGAGCCTACAAACAAAGCGTTCA TCCCAGGAAGTGGACTGTGTTTTGGCGAAACATTCCTGATGACACCATTC TCCCAGCTATTCAAGCTGCAATTGACATCCCACCAACGTTTTCATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76378:581..1027-

>mRNA_M-pyrifera_M_contig76378.18008.1 ID=mRNA_M-pyrifera_M_contig76378.18008.1|Name=mRNA_M-pyrifera_M_contig76378.18008.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=894bp|location=Sequence derived from alignment at M-pyrifera_M_contig76378:581..1027- (Macrocystis pyrifera P11B4 male)
TTGCCTCAACTTGCAGATCTCTTGGAAGCCTCTTTCCAAAAGCCTCTTCC
ACCTTCCTTCTTCACAGACATCAAACCAATGGTCAAATCCATCCTTGTCG
CAGAGTCTGGCAGAGGTTGTGCAATTGTTACAAATCGACAAGTTACACTC
TCTCCAGAAAGAAAAGAATCTCTTGCTTACCTTGACAAATTCGCTGTGCA
TCCTGCAGCGCAAGGAGAAGAATTGGGAGAACGGTTGTATGAAGCGCTTG
TCCAAGCTGAACCAAAGCTCTTTTGGAGATCTAGATCCGAGAATAGAATC
AACCCTTGGTATTTTCAAAGAGCTGATGGAGCCTACAAACAAAGCGTTCA
TCCCAGGAAGTGGACTGTGTTTTGGCGAAACATTCCTGATGACACCATTC
TCCCAGCTATTCAAGCTGCAATTGACATCCCACCAACGTTTTCATGATTG
CCTCAACTTGCAGATCTCTTGGAAGCCTCTTTCCAAAAGCCTCTTCCACC
TTCCTTCTTCACAGACATCAAACCAATGGTCAAATCCATCCTTGTCGCAG
AGTCTGGCAGAGGTTGTGCAATTGTTACAAATCGACAAGTTACACTCTCT
CCAGAAAGAAAAGAATCTCTTGCTTACCTTGACAAATTCGCTGTGCATCC
TGCAGCGCAAGGAGAAGAATTGGGAGAACGGTTGTATGAAGCGCTTGTCC
AAGCTGAACCAAAGCTCTTTTGGAGATCTAGATCCGAGAATAGAATCAAC
CCTTGGTATTTTCAAAGAGCTGATGGAGCCTACAAACAAAGCGTTCATCC
CAGGAAGTGGACTGTGTTTTGGCGAAACATTCCTGATGACACCATTCTCC
CAGCTATTCAAGCTGCAATTGACATCCCACCAACGTTTTCATGA
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