mRNA_M-pyrifera_M_contig76375.18006.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76375.18006.1
Unique NamemRNA_M-pyrifera_M_contig76375.18006.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A7S0JZH7_CAFRO (cGMP-dependent protein kinase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0JZH7_CAFRO)

HSP 1 Score: 314 bits (805), Expect = 2.620e-98
Identity = 148/232 (63.79%), Postives = 189/232 (81.47%), Query Frame = 1
Query:   16 KMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLLSKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESGDQVKICRRIVRGRVVWPSFI 711
            +  +A+ DLE++  LG+GTFGRV+LVRH+PT  AYALK LQKA++V YGQ+ NV +ER+VM  +NHPFVL+  AT++D++ L+MLLE VQGGELFSLL+ Q+TG +P D ARFY+ACV +GL E  H++   YRDLKPEN+LIDA GYIKIVD+GFAK +  RTYTLCGTPEYLAPELV GKGH+  VD WA G+L+YEM+ G SPFADES DQ+KIC++IV+GR  +P ++
Sbjct:  559 QSSLALRDLEIIRTLGAGTFGRVKLVRHRPTNAAYALKVLQKAQIVAYGQQKNVMNERNVMCMVNHPFVLKLCATYKDRNCLFMLLELVQGGELFSLLANQETGYLPADEARFYAACVVSGL-EALHSKSILYRDLKPENMLIDAQGYIKIVDMGFAKVVADRTYTLCGTPEYLAPELVYGKGHNKGVDYWAVGVLIYEMLCGSSPFADESNDQMKICKKIVKGRYTYPGWM 789          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: T0RW19_SAPDV (cGMP-dependent protein kinase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RW19_SAPDV)

HSP 1 Score: 268 bits (685), Expect = 9.630e-85
Identity = 133/239 (55.65%), Postives = 175/239 (73.22%), Query Frame = 1
Query:    1 ATAVAKMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLL--SKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESGDQVKICRRIVRGRVVWPSFI 711
            A   A+  +  +DLE++  LG+GTFGRV+LVRHK TG AYA+K LQK++VV Y Q+ N+ +E++++   NHPF+L+   TF+D+  LY+LLEFVQGGELF+ L  +++ TG +P D ARFY++ V   L E  H     YRDLKPENLLID  GYIK+VD GFAK  + RTYTLCGTPEYLAPELVLGKGH+  VD WA G+L+YEM  G SPF +   DQV+ICR I++  + +PS++
Sbjct:  130 AELTARDRVEFADLEILRTLGTGTFGRVKLVRHKGTGMAYAMKVLQKSQVVAYKQQLNILNEKNLLATCNHPFILKLYQTFKDEQCLYLLLEFVQGGELFAYLHCNERPTGRIPNDHARFYASHVVLAL-EYLHDRMIIYRDLKPENLLIDEEGYIKVVDFGFAKICQDRTYTLCGTPEYLAPELVLGKGHNKGVDYWAYGVLIYEMCVGASPFCNNPSDQVQICRNILKEPLRFPSWV 367          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A7S1CJW0_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJW0_9STRA)

HSP 1 Score: 264 bits (674), Expect = 1.270e-84
Identity = 133/231 (57.58%), Postives = 169/231 (73.16%), Query Frame = 1
Query:   22 DIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLLSKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADE-SGDQVKICRRIVRGRVVWPSFI 711
            +I   +LE +  LG+GTFGRV+LVR+K     YALK LQK+++V   Q+ N+ +E+ ++M I+HPF+L+   T++D+H LYMLLE VQGGELF+ L     GAV V  ARFY+ACV     +  HA+   YRDLKPENLLID  GYIK+VD GFAK +K RTYTLCGTPEYLAPELVLGKGHD  VD WA GIL+YEM AG SPFAD    DQ+ IC+ I++G++ +PS +
Sbjct:   18 NIPFRELEQLATLGTGTFGRVKLVRNKKDQKTYALKMLQKSQIVALRQQTNIMNEKRILMAISHPFILKMFQTYKDQHCLYMLLELVQGGELFNRLQSSG-GAVSVGDARFYAACVLDAF-DHLHAKKILYRDLKPENLLIDDGGYIKVVDFGFAKVVKDRTYTLCGTPEYLAPELVLGKGHDKGVDYWALGILIYEMAAGYSPFADHRDSDQMVICKNILKGQLEFPSKV 246          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A5A8C4I7_CAFRO (cGMP-dependent protein kinase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C4I7_CAFRO)

HSP 1 Score: 273 bits (697), Expect = 6.550e-83
Identity = 132/235 (56.17%), Postives = 173/235 (73.62%), Query Frame = 1
Query:   19 MDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLLSKQD----TGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESGDQVKICRRIVRGRVVWPSFI 711
            +++A +DLE    LG+GTFGRV+LV H+PTGTAYALK LQK+++V   Q+ NV  E++++  ++HPFV++   TF+DKH LYMLLE VQGGELFS +         G +  D +RFY+ACVA  LA   H  H AYRDLKPENLLID AG+IK+VD GFAK ++ RTYTLCGTPEYLAPEL+ GKGH+  VD WA GIL++EM +G SP+ DE  DQ+++ R I+R  + +P F+
Sbjct:  501 LELAFADLEQRATLGTGTFGRVKLVVHRPTGTAYALKALQKSQIVAMRQQKNVIREKEILAVVDHPFVIKLFQTFKDKHRLYMLLELVQGGELFSRMQGATFAGREGILSPDHSRFYAACVADALAH-LHERHVAYRDLKPENLLIDRAGFIKVVDFGFAKVVRDRTYTLCGTPEYLAPELISGKGHNKGVDWWALGILIFEMASGYSPYMDERDDQLRVARNIMRAELKFPDFV 734          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: H3G8L5_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=H3G8L5_PHYRM)

HSP 1 Score: 259 bits (661), Expect = 8.880e-83
Identity = 133/235 (56.60%), Postives = 168/235 (71.49%), Query Frame = 1
Query:   16 KMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLL--SKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESG-DQVKICRRIVRGRVVWPSFI 711
            +  I + DLE++  LG+GTFGRV+LVRHKPTG AYALK L KA VV Y Q+ NV +E+ +M   NHPF+L+   T++D   LY+L++FVQGGELF+ L  +    G +P D ARFY++ V   L E  H     YRDLKPENLLID  GY+K+VD GFAK +  RTYTLCGT EYLAPELVLGKGH+  VD WA GIL+YEMV G SPFA  +  DQ++ICR IV+ +V +P ++
Sbjct:    4 QRQIKLDDLEVLRTLGAGTFGRVKLVRHKPTGAAYALKVLNKASVVAYKQQRNVVNEKMIMAQCNHPFLLKLFTTYKDATRLYLLIDFVQGGELFTYLHSTPSSPGRLPNDHARFYASHVLMAL-EYLHDRCIVYRDLKPENLLIDPQGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSNQVDQMQICRNIVKEKVEFPGWV 237          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A7S1GFU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GFU0_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.510e-80
Identity = 123/220 (55.91%), Postives = 163/220 (74.09%), Query Frame = 1
Query:   55 MLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLLSKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKT-RTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESGDQVKICRRIVRGRVVWPSFI 711
            +LG G FG+V LVRH PTG A+ALK+L+KAR+    Q+ NV +ER V+  + HPFVLR   TF+    L+MLLE VQGGELF +L+++  G +PV WA+FY +CV + L +  H   + YRDLKPEN+LIDA GY KIVD GFAK++ + RT+T+CGTPEY+APE+VLGKGH+   D WA G+LL+EMV G +PFA+E  DQ+KIC  IV G++ +PS +
Sbjct:    3 LLGEGLFGKVHLVRHVPTGHAFALKELRKARLEASRQQKNVINERRVLYAVRHPFVLRLYRTFRTDAKLFMLLELVQGGELFGVLARE--GRLPVPWAQFYGSCVLSAL-DCLHGHGFVYRDLKPENVLIDADGYCKIVDFGFAKEVHSNRTFTVCGTPEYMAPEIVLGKGHNKGADFWALGVLLFEMVTGRTPFANEGDDQLKICHNIVTGKLSFPSVV 219          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A2P4XI42_9STRA (cGMP-dependent protein kinase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XI42_9STRA)

HSP 1 Score: 258 bits (660), Expect = 3.380e-80
Identity = 134/235 (57.02%), Postives = 166/235 (70.64%), Query Frame = 1
Query:   16 KMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLL--SKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESG-DQVKICRRIVRGRVVWPSFI 711
            +  I   +LE++  LGSGTFGRV+LVRH PTG AYALK L KA VV Y Q+ NV +E+ VM   NHPF+L+   TF+D   LY+L+EFVQGGELF+ L  +    G +P D ARFY++ V   L E  H     YRDLKPENLLID  GY+K+VD GFAK +  RTYTLCGT EYLAPELVLGKGH+  VD WA G+L+YEMV G SPFA  +  DQ++ICR IV+ +V +P ++
Sbjct:  202 QRQIKQDELEVLRTLGSGTFGRVKLVRHMPTGAAYALKILNKASVVAYKQQRNVVNEKSVMAQCNHPFLLKLYTTFKDATRLYLLIEFVQGGELFNYLHATPSSPGRLPNDHARFYASHVLMAL-EYLHDRCIVYRDLKPENLLIDPQGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGVLIYEMVVGHSPFAGSNQIDQMQICRNIVKEKVEFPGWV 435          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: W2QZ07_PHYPN (cGMP-dependent protein kinase n=12 Tax=Phytophthora TaxID=4783 RepID=W2QZ07_PHYPN)

HSP 1 Score: 264 bits (675), Expect = 4.730e-80
Identity = 137/235 (58.30%), Postives = 168/235 (71.49%), Query Frame = 1
Query:   16 KMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLL--SKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESG-DQVKICRRIVRGRVVWPSFI 711
            +  I + DLE++  LGSGTFGRV+LVRHK TG AYALK L KA VV Y Q+ NV +E+ VM   NHPF+L+   T++D   LY+L+EFVQGGELF+ L  +    G +P D ARFY++ V   L E  H     YRDLKPENLLID  GY+K+VD GFAK +  RTYTLCGT EYLAPELVLGKGH+  VD WA GIL+YEMV G SPFA  S  DQ++ICR IV+ +V +PS++
Sbjct:  456 QKQIKLDDLEVLRTLGSGTFGRVKLVRHKTTGVAYALKVLNKASVVAYKQQRNVVNEKSVMTQCNHPFLLKLYTTYKDAARLYLLIEFVQGGELFTYLHSTPSSPGRIPNDHARFYASHVLMAL-EYLHERCIVYRDLKPENLLIDPLGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGSSQVDQMQICRNIVKEKVEFPSYV 689          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A662Y4P3_9STRA (cGMP-dependent protein kinase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4P3_9STRA)

HSP 1 Score: 264 bits (674), Expect = 7.760e-80
Identity = 134/235 (57.02%), Postives = 170/235 (72.34%), Query Frame = 1
Query:   16 KMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLLSKQDT--GAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADESG-DQVKICRRIVRGRVVWPSFI 711
            +  I + +LE++  LGSGTFGRV+L +HKPTG AYALK L KA VV Y Q+ NV +E+ VM   NHPF+L+   T++D   LYML+EFVQGGELF+ L    T  G +P D ARFY++ V   L E  H +H  YRDLKPENLL+D  GY+K+VD GFAK +  RTYTLCGT EYLAPELVLGKGH+  VD WA GIL+YEMV G SPFA  +  DQ++ICR IV+ ++ +P+++
Sbjct:  464 QQQIRLEELEVLRTLGSGTFGRVKLAKHKPTGAAYALKVLDKASVVAYKQQRNVLNEKSVMAQCNHPFLLKLFTTYKDATKLYMLIEFVQGGELFTYLHCTPTSPGRLPNDHARFYASHVLMAL-EYMHEQHIVYRDLKPENLLLDPQGYLKVVDFGFAKVVDDRTYTLCGTTEYLAPELVLGKGHNRGVDYWALGILIYEMVVGHSPFAGTTQTDQMQICRNIVKEKLEFPAWV 697          
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Match: A0A067D6K4_SAPPC (cGMP-dependent protein kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D6K4_SAPPC)

HSP 1 Score: 263 bits (673), Expect = 7.770e-80
Identity = 133/240 (55.42%), Postives = 174/240 (72.50%), Query Frame = 1
Query:    1 ATAVAKMDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQEANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLL--SKQDTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKIVDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMVAGVSPFADES-GDQVKICRRIVRGRVVWPSFI 711
            A   A+  +  SDLE++  LG+GTFGRV+L RHK TG AYALK LQK++VV Y Q+ N+ +E++++   NHPF+L+   TF+D+  LY+L+EFVQGGELF+ L  +++ TG +P D ARFY++ V   L E  H     YRDLKPENLLID  GYIK+VD GFAK  + RTYTLCGTPEYLAPELVLGKGH+  VD WA G+L+YEM  G SPF   +  DQV+ICR I++  + +PS++
Sbjct:  442 AELTARDRVEFSDLEILRTLGTGTFGRVKLARHKGTGMAYALKVLQKSQVVAYKQQLNILNEKNLLASCNHPFILKLYQTFKDEQCLYLLMEFVQGGELFAYLHCNERPTGRIPNDHARFYASHVVLAL-EYLHDRMIIYRDLKPENLLIDEEGYIKVVDFGFAKICQDRTYTLCGTPEYLAPELVLGKGHNKGVDYWAYGVLIYEMCVGASPFCGNNPSDQVQICRNILKEPLRFPSWV 680          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76375.18006.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0JZH7_CAFRO2.620e-9863.79cGMP-dependent protein kinase n=2 Tax=Cafeteria ro... [more]
T0RW19_SAPDV9.630e-8555.65cGMP-dependent protein kinase n=1 Tax=Saprolegnia ... [more]
A0A7S1CJW0_9STRA1.270e-8457.58Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A5A8C4I7_CAFRO6.550e-8356.17cGMP-dependent protein kinase n=4 Tax=Cafeteria ro... [more]
H3G8L5_PHYRM8.880e-8356.60Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S1GFU0_9STRA2.510e-8055.91Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2P4XI42_9STRA3.380e-8057.02cGMP-dependent protein kinase n=1 Tax=Phytophthora... [more]
W2QZ07_PHYPN4.730e-8058.30cGMP-dependent protein kinase n=12 Tax=Phytophthor... [more]
A0A662Y4P3_9STRA7.760e-8057.02cGMP-dependent protein kinase n=2 Tax=Nothophytoph... [more]
A0A067D6K4_SAPPC7.770e-8055.42cGMP-dependent protein kinase n=2 Tax=Saprolegnia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76375contigM-pyrifera_M_contig76375:24..734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.9
Seed ortholog evalue7e-71
Seed eggNOG ortholog112098.XP_008611892.1
KEGG koko:K07376
KEGG Pathwayko04022,ko04270,ko04540,ko04611,ko04713,ko04714,ko04730,ko04740,ko04923,ko04970,map04022,map04270,map04540,map04611,map04713,map04714,map04730,map04740,map04923,map04970
KEGG ModuleM00694
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cGMP-dependent protein kinase activity
EggNOG OGsCOG0664@1,KOG0614@2759
EC2.7.11.12
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Exons1
Model size711
Cds size693
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816663.0891697-CDS-M-pyrifera_M_contig76375:23..7161622816663.0891697-CDS-M-pyrifera_M_contig76375:23..716Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76375 24..716 -
1692278105.679447-CDS-M-pyrifera_M_contig76375:23..7161692278105.679447-CDS-M-pyrifera_M_contig76375:23..716Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76375 24..716 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816663.1030097-UTR-M-pyrifera_M_contig76375:716..7341622816663.1030097-UTR-M-pyrifera_M_contig76375:716..734Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76375 717..734 -
1692278105.6909502-UTR-M-pyrifera_M_contig76375:716..7341692278105.6909502-UTR-M-pyrifera_M_contig76375:716..734Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76375 717..734 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76375.18006.1prot_M-pyrifera_M_contig76375.18006.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76375 24..716 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76375.18006.1

>prot_M-pyrifera_M_contig76375.18006.1 ID=prot_M-pyrifera_M_contig76375.18006.1|Name=mRNA_M-pyrifera_M_contig76375.18006.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=231bp
MDIAMSDLELMGMLGSGTFGRVRLVRHKPTGTAYALKQLQKARVVEYGQE
ANVKSERDVMMHINHPFVLRCVATFQDKHSLYMLLEFVQGGELFSLLSKQ
DTGAVPVDWARFYSACVAAGLAEGFHAEHYAYRDLKPENLLIDAAGYIKI
VDLGFAKQIKTRTYTLCGTPEYLAPELVLGKGHDYAVDNWAQGILLYEMV
AGVSPFADESGDQVKICRRIVRGRVVWPSFI
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mRNA from alignment at M-pyrifera_M_contig76375:24..734-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76375.18006.1 ID=mRNA_M-pyrifera_M_contig76375.18006.1|Name=mRNA_M-pyrifera_M_contig76375.18006.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=711bp|location=Sequence derived from alignment at M-pyrifera_M_contig76375:24..734- (Macrocystis pyrifera P11B4 male)
GCTACGGCTGTGGCCAAGATGGACATTGCAATGAGCGACTTGGAGCTGAT GGGGATGCTGGGCAGCGGGACGTTTGGGAGGGTGAGGCTGGTGCGACACA AACCCACGGGCACTGCATATGCGCTCAAGCAGCTGCAAAAGGCCAGGGTG GTCGAGTATGGACAGGAGGCCAACGTGAAGAGCGAGCGCGACGTGATGAT GCACATCAACCACCCGTTTGTGCTTCGATGCGTGGCAACGTTCCAGGACA AGCACTCGCTCTACATGCTGCTCGAGTTTGTGCAGGGCGGAGAGCTCTTC TCGCTGCTCTCCAAGCAAGACACTGGCGCAGTGCCTGTGGACTGGGCGAG GTTCTACTCGGCCTGTGTCGCTGCCGGCCTCGCAGAAGGGTTCCACGCAG AACACTATGCGTACCGAGATCTCAAGCCCGAGAACTTGCTCATTGACGCC GCGGGCTACATCAAAATCGTCGACTTGGGGTTCGCCAAGCAGATCAAGAC CAGAACCTACACTCTATGCGGCACTCCAGAGTACCTCGCGCCCGAGCTCG TGCTGGGCAAAGGCCACGACTACGCCGTGGACAACTGGGCACAGGGCATC TTGCTCTACGAAATGGTGGCAGGCGTATCTCCGTTTGCTGACGAATCTGG GGACCAGGTCAAAATCTGCAGACGCATCGTGCGAGGCAGGGTCGTGTGGC CCTCCTTCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76375:24..734-

>mRNA_M-pyrifera_M_contig76375.18006.1 ID=mRNA_M-pyrifera_M_contig76375.18006.1|Name=mRNA_M-pyrifera_M_contig76375.18006.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1386bp|location=Sequence derived from alignment at M-pyrifera_M_contig76375:24..734- (Macrocystis pyrifera P11B4 male)
ATGGACATTGCAATGAGCGACTTGGAGCTGATGGGGATGCTGGGCAGCGG
GACGTTTGGGAGGGTGAGGCTGGTGCGACACAAACCCACGGGCACTGCAT
ATGCGCTCAAGCAGCTGCAAAAGGCCAGGGTGGTCGAGTATGGACAGGAG
GCCAACGTGAAGAGCGAGCGCGACGTGATGATGCACATCAACCACCCGTT
TGTGCTTCGATGCGTGGCAACGTTCCAGGACAAGCACTCGCTCTACATGC
TGCTCGAGTTTGTGCAGGGCGGAGAGCTCTTCTCGCTGCTCTCCAAGCAA
GACACTGGCGCAGTGCCTGTGGACTGGGCGAGGTTCTACTCGGCCTGTGT
CGCTGCCGGCCTCGCAGAAGGGTTCCACGCAGAACACTATGCGTACCGAG
ATCTCAAGCCCGAGAACTTGCTCATTGACGCCGCGGGCTACATCAAAATC
GTCGACTTGGGGTTCGCCAAGCAGATCAAGACCAGAACCTACACTCTATG
CGGCACTCCAGAGTACCTCGCGCCCGAGCTCGTGCTGGGCAAAGGCCACG
ACTACGCCGTGGACAACTGGGCACAGGGCATCTTGCTCTACGAAATGGTG
GCAGGCGTATCTCCGTTTGCTGACGAATCTGGGGACCAGGTCAAAATCTG
CAGACGCATCGTGCGAGGCAGGGTCGTGTGGCCCTCCTTCATCATGGACA
TTGCAATGAGCGACTTGGAGCTGATGGGGATGCTGGGCAGCGGGACGTTT
GGGAGGGTGAGGCTGGTGCGACACAAACCCACGGGCACTGCATATGCGCT
CAAGCAGCTGCAAAAGGCCAGGGTGGTCGAGTATGGACAGGAGGCCAACG
TGAAGAGCGAGCGCGACGTGATGATGCACATCAACCACCCGTTTGTGCTT
CGATGCGTGGCAACGTTCCAGGACAAGCACTCGCTCTACATGCTGCTCGA
GTTTGTGCAGGGCGGAGAGCTCTTCTCGCTGCTCTCCAAGCAAGACACTG
GCGCAGTGCCTGTGGACTGGGCGAGGTTCTACTCGGCCTGTGTCGCTGCC
GGCCTCGCAGAAGGGTTCCACGCAGAACACTATGCGTACCGAGATCTCAA
GCCCGAGAACTTGCTCATTGACGCCGCGGGCTACATCAAAATCGTCGACT
TGGGGTTCGCCAAGCAGATCAAGACCAGAACCTACACTCTATGCGGCACT
CCAGAGTACCTCGCGCCCGAGCTCGTGCTGGGCAAAGGCCACGACTACGC
CGTGGACAACTGGGCACAGGGCATCTTGCTCTACGAAATGGTGGCAGGCG
TATCTCCGTTTGCTGACGAATCTGGGGACCAGGTCAAAATCTGCAGACGC
ATCGTGCGAGGCAGGGTCGTGTGGCCCTCCTTCATC
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