mRNA_M-pyrifera_M_contig76373.18005.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76373.18005.1
Unique NamemRNA_M-pyrifera_M_contig76373.18005.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: F2UHM8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UHM8_SALR5)

HSP 1 Score: 343 bits (879), Expect = 8.160e-114
Identity = 167/309 (54.05%), Postives = 212/309 (68.61%), Query Frame = 1
Query:    1 AGIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEEPGSPLHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPLPQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQRGFGP 927
            AGID +TT  QP+W++S++      +  VLRLSPPWGQSHYRD +D  +NH +Y +L  +F  V+S L     S+A L++QIENE +L YEW+C + G PL YTE+A+E AAF+  VAAA+K +GD  + + P P+APGG +  GCCG ++C GD+ G  G+ F +AM AA P V+  ADFLATHSYPASG GY FN P  QAGPGL YY LEL     DLPV++TETGW+ H  G PP S   +A WTV AY   WL D RI+GV PFMLQ  TWGD+ G+ +V  NG  +PV++QVQALRCQ    P
Sbjct:   73 AGIDLSTTGPQPSWVNSIKTLQGLNMNVVLRLSPPWGQSHYRDMSD-DANHHNYTSLAAAFVRVVSQLPR--SSNAPLWLQIENEPDLCYEWYCGQAGQPLSYTEIASEFAAFYLYVAAAVKAIGDPNLKVGPAPLAPGGALKCGCCGSQSCSGDSPGITGLQFMDAMTAAYPKVWSYADFLATHSYPASGIGYSFNVPFSQAGPGLTYYRLELNHTRPDLPVLITETGWASHTQGLPPCSEDNKAAWTVTAYQQLWLADDRILGVMPFMLQDATWGDKDGYAYVLTNGQQQPVFTQVQALRCQLQIDP 378          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A7S3DAB6_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DAB6_9EUKA)

HSP 1 Score: 288 bits (737), Expect = 2.620e-91
Identity = 143/310 (46.13%), Postives = 191/310 (61.61%), Query Frame = 1
Query:    1 AGIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEAD--AGSNHTSYKTLGKSFAAVISSLLSVVPSDA----KLYVQIENEVNLGYEWFC-EEPGSPLHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPLPQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRC 909
            AG+D + T    +W+ ++   +++ L  VLR+ P WGQSH+RD AD  A  ++T Y  L +++  V+  + +   + A    +L +QI NE +L YEWFC     SP+ Y E+A E A+FFRD A AI  +GD  + +S   +APGG +  GCCG   C GD+ G  G+ +  AM+AAVP VFD  DFL +HSYPA+G GYGFN P  QA PGL Y+E ELQ  GRDLPV +TETGW  H  G P  +  Q+  W   AY   WL D+RII VTPFMLQ   WGDQ G+ +V  +G   P ++ V+ LRC
Sbjct:  145 AGVDLSATGPAQSWVDAVNYVFQQGLNVVLRIGPGWGQSHFRDLADGAAQGDYTHYTHLAQAYVNVLKGIPTPASTSAYSGRQLLIQIHNEPDLCYEWFCGTAASSPIGYEEMAKEYASFFRDTADAIHAMGDDSLKVSIGALAPGGALQCGCCGASACSGDSPGITGLQYMQAMQAAVPGVFDRLDFLTSHSYPANGIGYGFNVPFDQAAPGLTYFEKELQTIGRDLPVAITETGWCTHRDGMPTCTEDQKGQWYTQAYQQVWLPDNRIIAVTPFMLQDKVWGDQDGYAFVMTDGTQLPAFTNVKGLRC 454          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A7C5LAC5_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C5LAC5_9DELT)

HSP 1 Score: 249 bits (636), Expect = 2.780e-76
Identity = 138/318 (43.40%), Postives = 185/318 (58.18%), Query Frame = 1
Query:    4 GIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFC---EEPGSP------LHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPLPQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQRGFGPC 930
            G++   T+    WI ++  +Y   L PV+R+ PPWG    R+ +D GS  TSY  +   +A V+SS+LS VP    +Y +I NE NL YEW C   E P +P      +HY+++A E A F RDV+ A++ +GDSRV I+   +APGG+V+  C G +   G   G   +DF   M+ AV +++D  D  ATHSYPASG GYGF       GPGL ++E EL   GR  PV++TETGW+ H       S  + A WTV AY   WL    I+GV PFMLQ P W +   F WVD +GN  PVY+ V++LRC  G  PC
Sbjct:  141 GVEPNLTSTPGEWIDAVCNSYSRNLIPVIRIGPPWGNRRIRNMSDGGS-FTSYTQIANKYAMVVSSVLSCVPPSTPIYFEIHNEPNLCYEWPCQPGEAPPNPAVPANWMHYSDMAKEYAFFLRDVSNAMRAIGDSRVKITNGGLAPGGVVSCECNG-DGSGGFNPGITALDFIREMQNAVSDIWDKIDAWATHSYPASGLGYGFFDRYENCGPGLRFFENELSTAGRSFPVLITETGWTIHHESFN-WSREEVADWTVRAYQDLWLVHPSILGVMPFMLQDPGWDN---FAWVDPSGNPYPVYNAVRSLRCSLGIPPC 452          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A3M2ACJ1_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M2ACJ1_9DELT)

HSP 1 Score: 227 bits (578), Expect = 6.280e-68
Identity = 133/317 (41.96%), Postives = 173/317 (54.57%), Query Frame = 1
Query:    4 GIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEEPGSP----LHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGF----NAPLPQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQRGFGPC 930
            GID   T A   W  ++ +AY+  L PV+RL PPWG    R+++D  + H  Y  L  ++AAV+SSL   +     +Y+++ NE NL YEW C+ PG      + Y ++A+E A    DVAAA+ GLGD R+ +    +APGG V+  C G+   PG        +F  AMKAAVP      D  A+H YPA G G+GF     AP  +   GL YYE EL   G DLPVIVTETGW+       P    + A W   AY+  +L D RI+ V PF+LQ P W D   F WVD  GN  PVY+ V+  RCQ    PC
Sbjct:  120 GIDRNMTQAPQEWKDAVALAYERDLIPVIRLGPPWGDRRVRNQSDDAA-HLEYGQLAAAYAAVVSSL--PLRDGWPVYIEVHNEPNLCYEWACD-PGDGNDGWMGYEQIASEYAHMLEDVAAALHGLGDPRIRVVNGGLAPGGAVSCECGGEGFTPG----ITSAEFIAAMKAAVPAFPSFLDAWASHPYPAEGLGWGFFVSYEAPDWKGETGLRYYEHELSALGTDLPVIVTETGWTIDPGKGGPGDRNKVAVWMKNAYENVFLQDDRIVTVLPFLLQDPNWDD---FAWVDGAGNPYPVYTTVRDFRCQVAMPPC 425          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A2D5EUT6_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2D5EUT6_9DELT)

HSP 1 Score: 228 bits (580), Expect = 2.890e-67
Identity = 127/302 (42.05%), Postives = 171/302 (56.62%), Query Frame = 1
Query:   40 WISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEE---PGSPLHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPLPQAGPGLMYYELELQVFGR-DLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQ-GPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQRGFGPC 930
            W+   + AY+  L PV+R +P WG    R+++D+G    +Y  L  S+ A++  L   +P+    YV++ NE NL YEW C+    PG  +    +A E A+  RDVA AI   GD+R  +    +APGG+ +  C G      +AG     DF  AM+  VP +F   D  A+H+YPA G G+GF  P  +AGPGL Y+E EL   GR DLPV++TETGW R   G   ASA QQATWTV AY+  WL    I+ + PF+LQ G +W    GF WVD  GN  PV+  V+ LRC+   G C
Sbjct:  219 WVRVTRQAYERGLIPVVRFAPDWGDRRVRNQSDSGDG-LAYTGLAASYVAILRGL--PIPTGWPFYVEVHNEPNLCYEWACDRGVFPGDRISGDRIALEYASMLRDVADAIHATGDARYRVVNGGLAPGGVRSCECVGAGEGGFEAGNTSR-DFLAAMERGVPGIFSKLDAFASHAYPAEGEGWGFFVPYDRAGPGLRYFETELSTIGRPDLPVLMTETGWPREFHGTGYASADQQATWTVQAYENVWLTHPNILAIMPFILQDGGSWD---GFAWVDAVGNPRPVFGAVRDLRCRSIPGRC 513          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A6GF65_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Plesiocystis pacifica SIR-1 TaxID=391625 RepID=A6GF65_9DELT)

HSP 1 Score: 206 bits (525), Expect = 8.570e-60
Identity = 126/314 (40.13%), Postives = 166/314 (52.87%), Query Frame = 1
Query:    1 AGIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEEPGSP----LHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPLP----QAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQRG 918
            AGI      A   W S++Q++Y   L P +RL PPW     R+++D  + H  Y    +++A  ++SL +       LYV++ NE NL YEW C+ PG      L Y   AAE A    DVA A+ GLGD R+ +    +APGG V+  C G+   PG       +++  AM AA P +    D  A+H+YPA G+G+GF  P      QA  GL+YY+ E    G DLPV++TETGW+    G    S  Q A WTV AY+  WL D  II V PF L  P W     F W D  GN  PVY+ V+ALRC  G
Sbjct:  150 AGITKDMHDAPAEWKSAVQLSYDRDLVPYVRLGPPWDDRRVRNQSDDAA-HVIYGAYAQAYADTVASLPT--REGWPLYVEVHNEPNLCYEWACD-PGDGNDGWLPYETAAAEYAHMLADVADALHGLGDPRIRVLNGGLAPGGTVSCECGGEGFQPG----ITSIEYIQAMLAAEPGLIAKLDAWASHAYPAEGKGWGFFVPYDGPGGQAHTGLVYYQDERAAIGADLPVVMTETGWTTELGG----SHEQIAGWTVNAYEHVWLADPGIIAVLPFQLMDPNWD---AFSWADGGGNPRPVYTAVRALRCGLG 448          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A850GBI6_9DELT (Uncharacterized protein n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850GBI6_9DELT)

HSP 1 Score: 205 bits (521), Expect = 3.350e-59
Identity = 121/315 (38.41%), Postives = 165/315 (52.38%), Query Frame = 1
Query:    1 AGIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCE---EPGSPLHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPLP----QAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQRGFG 924
            AGI      A   W  ++Q+ Y   L P +RL PPWG    R+++D G+ H +Y    +++A  ++SL         LYV++ NE NL YEW C+   +    L Y   AAE A    DVA A+ GLGD+R+ +    +APGG V+  C G     G   G   +++  AM AA P +    D  A+HSYPA G+G+GF         QA  GL+YY+ EL   G  LPV++TETGW+         S  Q A+WTV AY+  WL D+ I  + PF L   +W     F W D +GN  PVY+ V+ LRC  G G
Sbjct:  146 AGITKDMHAASDEWKQAVQLTYDRDLVPYVRLGPPWGDRRVRNQSDDGA-HANYAAYAQAYADTVASLPK--REGWPLYVEVHNEPNLCYEWACDAGDQNDGWLGYQVAAAEYAHMLADVADALHGLGDARIKVMNGGLAPGGTVSCECGGD----GYEAGITSIEYIQAMLAAEPGLAGKLDAWASHSYPAEGKGWGFFVAYDGVNGQAQTGLVYYQDELAAIGAQLPVVMTETGWTTEY-----GSQDQVASWTVNAYNYVWLADAGIQAILPFQLMDASWD---AFAWADTSGNPRPVYNAVRQLRCDLGVG 445          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A831ZNB3_9DELT (Uncharacterized protein n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A831ZNB3_9DELT)

HSP 1 Score: 197 bits (501), Expect = 2.590e-56
Identity = 119/311 (38.26%), Postives = 162/311 (52.09%), Query Frame = 1
Query:    4 GIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEEPGSP----LHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGF----NAPLPQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQALRCQ 912
            GI      A   W  + +  Y   L PV+RL PPWG    R+++D G+ H  Y +L +++A V++SL         +Y+++ NE NL YEW C+ PG      L Y + + E A    DVA A+  LGD R+ +     APGG V   C G+    G   G   V +  +M  AVP++    D  A+H YPA G+G+GF      P  +A  GL+YY+ EL V G DLPVI+TETGW+            Q A WT  AY+  WL +  I+ V PFML+ P W D   F W + +G   PVY  V+ LRCQ
Sbjct:  138 GITRDMHDAPQDWKQATERTYNADLVPVIRLGPPWGDRKVRNQSDDGA-HLDYTSLAQAYADVVASLPK--REGWPMYIEVHNETNLCYEWTCD-PGDGNDGWLTYQQSSTEYAHMLADVADALHALGDPRIRVINGGFAPGGAVKCECGGE----GFEAGITSVPYIESMLTAVPDLTAKLDAWASHPYPAEGQGWGFFVSYQEPDWKASTGLLYYKEELAVVG-DLPVIITETGWTVDPNKGGQGDRNQVAAWTKSAYEKVWLQEPEIVHVLPFMLKDPNWDD---FAWANNDGAPYPVYDAVRGLRCQ 436          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: X6LII6_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LII6_RETFI)

HSP 1 Score: 124 bits (312), Expect = 1.210e-31
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 1
Query:  502 MKAAVPNVFDAADFLATHSYPASGRGYGFNAPLPQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPTWGDQ 837
            M   +P +F+  DFLA+HSYPAS  GYGFN P  Q  PGL+YY+ EL   GR + V++TETGW+ +    P  +  ++A WTV A+   W NDSR++GV PFMLQ   WGDQ
Sbjct:    4 MMDVIPTIFEKVDFLASHSYPASNIGYGFNVPYDQGIPGLLYYQKELDTIGRSVQVLITETGWATNVN--PTCTEQEKAQWTVSAF-GLWRNDSRVMGVMPFMLQDAYWGDQ 112          
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Match: A0A1V5YEP4_9CHLR (DUF11 domain-containing protein n=1 Tax=Chloroflexi bacterium ADurb.Bin180 TaxID=1852857 RepID=A0A1V5YEP4_9CHLR)

HSP 1 Score: 106 bits (264), Expect = 9.690e-22
Identity = 91/304 (29.93%), Postives = 140/304 (46.05%), Query Frame = 1
Query:   34 PAW-ISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSNHTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEEPGSPLHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQENCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRG-YGF-NAPLPQAGPGLMYYELELQVFGRD----LPVIVTETGWSR-HAT----GEPPASATQQATWTVGAYDAYWLNDSRIIGVTPFMLQGPT--WGDQYGFGWVDMNGNVEPVYSQVQAL 903
            PAW +  +  +Y+  L PV+RL+   G + ++ + D      SY+T  ++F  V+  L   VP    LYVQ+ NE NL  EW  E   SP+ Y         F  ++AAA++ +G+ R++I   P++PGG   Y                 +D+   M  AVP    A D  A+H YP +    Y   N     A   +  Y+ EL +  R     L V++TETG++  HA     G PP     +A + + A+  YW     +IGV+PF L  PT  WG    + W+  +G     +  V+ +
Sbjct:  179 PAWMVDFVNESYERGLTPVIRLAGGRGSTWFKPKTDPNG---SYQTWTQAFRRVVQGL--PVPEGRLLYVQVWNEPNLNEEW--EGAASPVEY-------GRFLVEMAAALRSIGNPRIVILNAPLSPGGEYYY-----------------LDYLEDMLNAVPASLWAFDVWASHPYPNNHPPEYNLHNGTARYADATIDLYQQELAILARHGRSGLSVLLTETGYALGHADFGFEGYPPIGEENRADYILRAFRDYWSKWPEVIGVSPFELVDPTGAWG---AWDWLYPDGRSHAQFDLVRVM 448          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76373.18005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F2UHM8_SALR58.160e-11454.05Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7S3DAB6_9EUKA2.620e-9146.13Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A7C5LAC5_9DELT2.780e-7643.40Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A3M2ACJ1_9DELT6.280e-6841.96Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A2D5EUT6_9DELT2.890e-6742.05Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A6GF65_9DELT8.570e-6040.13Uncharacterized protein (Fragment) n=1 Tax=Plesioc... [more]
A0A850GBI6_9DELT3.350e-5938.41Uncharacterized protein n=1 Tax=Pseudenhygromyxa s... [more]
A0A831ZNB3_9DELT2.590e-5638.26Uncharacterized protein n=1 Tax=Nannocystis exeden... [more]
X6LII6_RETFI1.210e-3150.89Uncharacterized protein n=1 Tax=Reticulomyxa filos... [more]
A0A1V5YEP4_9CHLR9.690e-2229.93DUF11 domain-containing protein n=1 Tax=Chloroflex... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76373contigM-pyrifera_M_contig76373:3..935 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size933
Cds size933
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816663.0535846-CDS-M-pyrifera_M_contig76373:2..9351622816663.0535846-CDS-M-pyrifera_M_contig76373:2..935Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76373 3..935 +
1692278105.6592243-CDS-M-pyrifera_M_contig76373:2..9351692278105.6592243-CDS-M-pyrifera_M_contig76373:2..935Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76373 3..935 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76373.18005.1prot_M-pyrifera_M_contig76373.18005.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76373 3..935 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76373.18005.1

>prot_M-pyrifera_M_contig76373.18005.1 ID=prot_M-pyrifera_M_contig76373.18005.1|Name=mRNA_M-pyrifera_M_contig76373.18005.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=311bp
AGIDNTTTTAQPAWISSLQMAYKEPLQPVLRLSPPWGQSHYRDEADAGSN
HTSYKTLGKSFAAVISSLLSVVPSDAKLYVQIENEVNLGYEWFCEEPGSP
LHYTEVAAEVAAFFRDVAAAIKGLGDSRVLISPPPMAPGGLVTYGCCGQE
NCPGDAGGALGVDFQNAMKAAVPNVFDAADFLATHSYPASGRGYGFNAPL
PQAGPGLMYYELELQVFGRDLPVIVTETGWSRHATGEPPASATQQATWTV
GAYDAYWLNDSRIIGVTPFMLQGPTWGDQYGFGWVDMNGNVEPVYSQVQA
LRCQRGFGPC*
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mRNA from alignment at M-pyrifera_M_contig76373:3..935+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76373.18005.1 ID=mRNA_M-pyrifera_M_contig76373.18005.1|Name=mRNA_M-pyrifera_M_contig76373.18005.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=933bp|location=Sequence derived from alignment at M-pyrifera_M_contig76373:3..935+ (Macrocystis pyrifera P11B4 male)
GCTGGAATTGACAATACAACAACCACAGCGCAACCTGCATGGATATCCTC GCTCCAGATGGCCTACAAGGAGCCCTTGCAACCAGTGCTTCGTCTCTCCC CTCCATGGGGACAATCTCACTATCGCGATGAAGCTGATGCAGGCTCGAAT CATACGTCCTACAAGACGCTAGGAAAGTCTTTTGCGGCTGTCATCTCCTC CCTCCTTTCTGTGGTTCCATCGGATGCAAAGCTGTATGTCCAGATTGAGA ATGAGGTGAATTTAGGGTATGAGTGGTTCTGTGAAGAGCCTGGATCGCCT CTACACTATACAGAAGTTGCAGCAGAAGTTGCTGCGTTCTTTCGAGATGT TGCAGCTGCAATCAAAGGGTTAGGTGATTCGCGAGTTCTTATTTCCCCAC CACCCATGGCTCCTGGAGGCTTAGTGACGTATGGATGCTGCGGACAAGAG AATTGCCCTGGAGATGCTGGTGGTGCGCTTGGAGTTGACTTTCAGAATGC TATGAAAGCTGCAGTGCCAAATGTGTTTGATGCAGCTGACTTCCTAGCGA CCCACTCTTATCCAGCATCTGGTCGTGGGTATGGTTTCAATGCACCCTTG CCTCAAGCAGGTCCTGGATTGATGTATTACGAGCTAGAATTGCAAGTGTT TGGCCGTGATCTCCCTGTGATTGTCACAGAGACTGGGTGGTCCCGACATG CCACCGGAGAACCTCCAGCCTCTGCCACACAACAAGCTACCTGGACTGTA GGAGCATACGATGCGTACTGGCTAAATGACTCACGCATTATCGGAGTTAC CCCTTTCATGCTCCAAGGTCCTACTTGGGGAGACCAGTATGGGTTTGGTT GGGTAGATATGAACGGCAACGTAGAGCCAGTCTATTCCCAGGTCCAAGCA CTCCGATGCCAAAGAGGATTTGGGCCATGTTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76373:3..935+

>mRNA_M-pyrifera_M_contig76373.18005.1 ID=mRNA_M-pyrifera_M_contig76373.18005.1|Name=mRNA_M-pyrifera_M_contig76373.18005.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1866bp|location=Sequence derived from alignment at M-pyrifera_M_contig76373:3..935+ (Macrocystis pyrifera P11B4 male)
GCTGGAATTGACAATACAACAACCACAGCGCAACCTGCATGGATATCCTC
GCTCCAGATGGCCTACAAGGAGCCCTTGCAACCAGTGCTTCGTCTCTCCC
CTCCATGGGGACAATCTCACTATCGCGATGAAGCTGATGCAGGCTCGAAT
CATACGTCCTACAAGACGCTAGGAAAGTCTTTTGCGGCTGTCATCTCCTC
CCTCCTTTCTGTGGTTCCATCGGATGCAAAGCTGTATGTCCAGATTGAGA
ATGAGGTGAATTTAGGGTATGAGTGGTTCTGTGAAGAGCCTGGATCGCCT
CTACACTATACAGAAGTTGCAGCAGAAGTTGCTGCGTTCTTTCGAGATGT
TGCAGCTGCAATCAAAGGGTTAGGTGATTCGCGAGTTCTTATTTCCCCAC
CACCCATGGCTCCTGGAGGCTTAGTGACGTATGGATGCTGCGGACAAGAG
AATTGCCCTGGAGATGCTGGTGGTGCGCTTGGAGTTGACTTTCAGAATGC
TATGAAAGCTGCAGTGCCAAATGTGTTTGATGCAGCTGACTTCCTAGCGA
CCCACTCTTATCCAGCATCTGGTCGTGGGTATGGTTTCAATGCACCCTTG
CCTCAAGCAGGTCCTGGATTGATGTATTACGAGCTAGAATTGCAAGTGTT
TGGCCGTGATCTCCCTGTGATTGTCACAGAGACTGGGTGGTCCCGACATG
CCACCGGAGAACCTCCAGCCTCTGCCACACAACAAGCTACCTGGACTGTA
GGAGCATACGATGCGTACTGGCTAAATGACTCACGCATTATCGGAGTTAC
CCCTTTCATGCTCCAAGGTCCTACTTGGGGAGACCAGTATGGGTTTGGTT
GGGTAGATATGAACGGCAACGTAGAGCCAGTCTATTCCCAGGTCCAAGCA
CTCCGATGCCAAAGAGGATTTGGGCCATGTTAAGCTGGAATTGACAATAC
AACAACCACAGCGCAACCTGCATGGATATCCTCGCTCCAGATGGCCTACA
AGGAGCCCTTGCAACCAGTGCTTCGTCTCTCCCCTCCATGGGGACAATCT
CACTATCGCGATGAAGCTGATGCAGGCTCGAATCATACGTCCTACAAGAC
GCTAGGAAAGTCTTTTGCGGCTGTCATCTCCTCCCTCCTTTCTGTGGTTC
CATCGGATGCAAAGCTGTATGTCCAGATTGAGAATGAGGTGAATTTAGGG
TATGAGTGGTTCTGTGAAGAGCCTGGATCGCCTCTACACTATACAGAAGT
TGCAGCAGAAGTTGCTGCGTTCTTTCGAGATGTTGCAGCTGCAATCAAAG
GGTTAGGTGATTCGCGAGTTCTTATTTCCCCACCACCCATGGCTCCTGGA
GGCTTAGTGACGTATGGATGCTGCGGACAAGAGAATTGCCCTGGAGATGC
TGGTGGTGCGCTTGGAGTTGACTTTCAGAATGCTATGAAAGCTGCAGTGC
CAAATGTGTTTGATGCAGCTGACTTCCTAGCGACCCACTCTTATCCAGCA
TCTGGTCGTGGGTATGGTTTCAATGCACCCTTGCCTCAAGCAGGTCCTGG
ATTGATGTATTACGAGCTAGAATTGCAAGTGTTTGGCCGTGATCTCCCTG
TGATTGTCACAGAGACTGGGTGGTCCCGACATGCCACCGGAGAACCTCCA
GCCTCTGCCACACAACAAGCTACCTGGACTGTAGGAGCATACGATGCGTA
CTGGCTAAATGACTCACGCATTATCGGAGTTACCCCTTTCATGCTCCAAG
GTCCTACTTGGGGAGACCAGTATGGGTTTGGTTGGGTAGATATGAACGGC
AACGTAGAGCCAGTCTATTCCCAGGTCCAAGCACTCCGATGCCAAAGAGG
ATTTGGGCCATGTTAA
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