mRNA_M-pyrifera_M_contig76348.18001.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: A0A812P5J9_9DINO (Tyrosine aminotransferase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812P5J9_9DINO) HSP 1 Score: 139 bits (349), Expect = 1.360e-36 Identity = 73/123 (59.35%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRPKD--KKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 I PS + RV NPIRA+VD I++P D K++IPLSLGDPTVF N TP+YFV KL L NGY HSAG PAARAAVAARY T PLT ED+V+T GCS AL+ A VLL G+ +++P Sbjct: 20 IEPSAFSKRVHNPIRAIVDNIKKPDDPDKELIPLSLGDPTVFGNFKTPQYFVDKLQENLLSFKHNGYVHSAGPPAARAAVAARYGTATSPLTAEDVVITCGCSGALDFAIGVLLSPGQKLLLP 142
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: A0A5A8DUZ8_CAFRO (Tyrosine aminotransferase n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DUZ8_CAFRO) HSP 1 Score: 132 bits (331), Expect = 5.100e-34 Identity = 69/123 (56.10%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRPKDK--KIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 + S+ A R NPIRA+VDTI+ P+DK ++IPLSLGDPTVF N TP+ FV + LD + NGY HSAG+ AAR A+A RYS+EA PLT +D+V+ SGCS AL++A VL G NIV+P Sbjct: 15 VAASETANRTMNPIRAIVDTIKFPEDKTKEVIPLSLGDPTVFGNFKTPELFVKAIKDNLDALSCNGYVHSAGTVAARKAIAQRYSSEAAPLTSDDVVIASGCSGALDLAITVLCNPGSNIVIP 137
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: A0A6A3TKJ0_9STRA (Aminotran_1_2 domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TKJ0_9STRA) HSP 1 Score: 118 bits (295), Expect = 5.860e-29 Identity = 62/123 (50.41%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRP--KDKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 I PS + +NPIR +VD I++P K++IPLSLGDPTVF NLH P V+ + NGY HSAGS AARAA+A RY PLTP+D+++TSGCS A+++A LL G NI++P Sbjct: 14 IQPSDFSKLCNNPIRKIVDNIKKPATSTKELIPLSLGDPTVFGNLHCPDVLVNAIVRHTRSMQHNGYIHSAGSGAARAAIAQRYGNARAPLTPDDVIITSGCSGAIDIAVRGLLNPGDNILLP 136
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: A0A8K1CE66_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE66_PYTOL) HSP 1 Score: 117 bits (294), Expect = 1.360e-28 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRPK--DKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 +VPS+ ++ +NPIR +VD I++PK DK +IPLSLGDPTVF NL P V + + NGY HSAG AAR A+A + ++A PLT EDIV+ SGCS A+++A LL G NI++P Sbjct: 26 VVPSEFSMLTANPIRKIVDNIKKPKNSDKSLIPLSLGDPTVFGNLKCPDVLVESIVRNVRSMKHNGYIHSAGPEAAREAIAKHFGSDAAPLTKEDIVIASGCSGAIDIALTGLLNPGDNILLP 148
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: A0A2P4XPM0_9STRA (Tyrosine aminotransferase n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPM0_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.600e-28 Identity = 64/134 (47.76%), Postives = 79/134 (58.96%), Query Frame = 1 Query: 25 DAGATSGVYERIVPSKMALRVSNPIRAVVDTIRRP--KDKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 DA A + + PS+ + SNPIR +VD I++P K +IPLSLGDPTVF NLH P V + NGY HSAGS AAR A+A Y PLT DIV+ SGCS A+E+A LL G NI++P Sbjct: 10 DAPAKEKLQWNVQPSEFSKLCSNPIRKIVDNIKKPATSTKTLIPLSLGDPTVFGNLHCPDVLVQAIVRNTRSMQHNGYIHSAGSEAARTAIAQHYGNNRAPLTMNDIVIASGCSGAIEIALLGLLNAGDNILLP 143
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: H3G6I8_PHYRM (Tyrosine aminotransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6I8_PHYRM) HSP 1 Score: 114 bits (284), Expect = 2.790e-27 Identity = 62/123 (50.41%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRPKD--KKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 + PS + R NPIR +VD+I++P + K +IPLSLGDPTVF NLH P V + NGY HSAGS AARAA+A Y PLT +DI++TSGCS AL++A LL G+NI++P Sbjct: 7 VQPSDSSKRCFNPIRKIVDSIKKPVNFSKTMIPLSLGDPTVFGNLHCPDVLVEAIVRNTRSMQHNGYIHSAGSEAARAAIAHHYGNSKAPLTVDDIIITSGCSGALDIAFRGLLNPGENILLP 129
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: M4B8U6_HYAAE (Tyrosine aminotransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8U6_HYAAE) HSP 1 Score: 113 bits (283), Expect = 7.600e-27 Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRP--KDKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 + PS + SNPIR +VD I++P KK+IPLSLGDPTVF NLH P V + NGY HSAGS AAR A+A + PLT ED+++TSGCS A+E+A LL G NI++P Sbjct: 74 VQPSAFSKLCSNPIREIVDNIKKPATSTKKLIPLSLGDPTVFGNLHCPDVLVEAIVRNTRSMQHNGYIHSAGSEAARTAIAEHFGKPEAPLTMEDVIITSGCSGAIEIALQGLLNPGDNILLP 196
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: A0A7S3UZ19_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UZ19_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.780e-27 Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = 1 Query: 37 TSGVYERIVPSKMALRVSNPIRAVVDTI---RRPKDKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 T G + + S+ ALR NPIR +VD + P+DK +I LS+GDPT F NL TP+ FV + + D +S+GYTHSAG PAARAAVA RYS L +D+++ SGCS ALE+A L G N+++P Sbjct: 19 TCGDRKPLPMSQCALRSRNPIREIVDNLVIPTPPEDKPLILLSIGDPTKFGNLKTPQIFVDAICEAVRDFSSHGYTHSAGIPAARAAVAQRYSYGGSKLVEDDVIIASGCSGALEIAIKALASEGDNMLVP 149
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: W2PW18_PHYPN (Tyrosine aminotransferase, variant n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PW18_PHYPN) HSP 1 Score: 110 bits (276), Expect = 1.140e-26 Identity = 61/123 (49.59%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRP--KDKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 + PS A SNPIR +VD I++P K +IPLSLGDPTVF NLH P V + NGY HSAGS AARAA+A + PLT +DI++ SGCS A+E+A LL G NI++P Sbjct: 26 VQPSDFANLCSNPIRKIVDNIKKPATSTKTLIPLSLGDPTVFGNLHCPDVLVQAIVRNTRSMQHNGYIHSAGSEAARAAIAQHFGNMRAPLTMDDIIIASGCSGAIEIALRGLLNPGDNILLP 148
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Match: H3GJ12_PHYRM (Tyrosine aminotransferase n=15 Tax=Phytophthora TaxID=4783 RepID=H3GJ12_PHYRM) HSP 1 Score: 111 bits (278), Expect = 2.590e-26 Identity = 61/123 (49.59%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 58 IVPSKMALRVSNPIRAVVDTIRRP--KDKKIIPLSLGDPTVFRNLHTPKYFVSKLHSLLDDETSNGYTHSAGSPAARAAVAARYSTEAHPLTPEDIVLTSGCSHALEMAAAVLLETGKNIVMP 420 + PS + SNPIR +VD I++P K +IPLSLGDPTVF NLH P V + NGY HSAGS AARAA+A Y PLT +DI++ SGCS A+E+A LL G NI++P Sbjct: 29 VQPSDFSKLCSNPIRKIVDNIKKPATSTKTLIPLSLGDPTVFGNLHCPDVLVQAIVRNTRSMQHNGYIHSAGSEAARAAIAQHYGNMRAPLTMDDIIIASGCSGAIEIALRGLLNPGDNILLP 151 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76348.18001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76348.18001.1 >prot_M-pyrifera_M_contig76348.18001.1 ID=prot_M-pyrifera_M_contig76348.18001.1|Name=mRNA_M-pyrifera_M_contig76348.18001.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=140bp MSIAGEAGDAGATSGVYERIVPSKMALRVSNPIRAVVDTIRRPKDKKIIPback to top mRNA from alignment at M-pyrifera_M_contig76348:4..423- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76348.18001.1 ID=mRNA_M-pyrifera_M_contig76348.18001.1|Name=mRNA_M-pyrifera_M_contig76348.18001.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=420bp|location=Sequence derived from alignment at M-pyrifera_M_contig76348:4..423- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76348:4..423- >mRNA_M-pyrifera_M_contig76348.18001.1 ID=mRNA_M-pyrifera_M_contig76348.18001.1|Name=mRNA_M-pyrifera_M_contig76348.18001.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig76348:4..423- (Macrocystis pyrifera P11B4 male)back to top |