mRNA_M-pyrifera_M_contig76344.17998.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76344.17998.1
Unique NamemRNA_M-pyrifera_M_contig76344.17998.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A2E7KFP0_9PLAN (SSD domain-containing protein n=10 Tax=Bacteria TaxID=2 RepID=A0A2E7KFP0_9PLAN)

HSP 1 Score: 524 bits (1349), Expect = 1.540e-177
Identity = 284/285 (99.65%), Postives = 285/285 (100.00%), Query Frame = 1
Query:    1 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGK+KSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET
Sbjct:  684 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKTKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 968          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A350K592_9PLAN (MMPL domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K592_9PLAN)

HSP 1 Score: 441 bits (1133), Expect = 6.440e-152
Identity = 237/285 (83.16%), Postives = 261/285 (91.58%), Query Frame = 1
Query:    1 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            ++AD T ++EQET  G R V ++KGDE+WRITAQVAIMTDL+Y DLT++LNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAF VIA+VMMVLLRS   GLITMLPNLMPIGVIFGLLSWM ++VDIGTMITASVALGIAVDGTLHLLTWFKIGI+EGK+KSEAVAAALGHCGPAMWQTSA V ISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLG+LIV S  +E++  E  PLLQ+GKE+KPHLSH +KR+QSE+S ET
Sbjct:  156 HVADKTVEMEQETDYGTRTVVVEKGDELWRITAQVAIMTDLDYGDLTHDLNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFIVIAIVMMVLLRSILGGLITMLPNLMPIGVIFGLLSWMRISVDIGTMITASVALGIAVDGTLHLLTWFKIGIQEGKTKSEAVAAALGHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGSLIVASLNKERELAESVPLLQDGKETKPHLSHAIKRSQSEKSLET 440          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A355GAF6_9PLAN (MMPL domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355GAF6_9PLAN)

HSP 1 Score: 440 bits (1131), Expect = 1.760e-151
Identity = 235/284 (82.75%), Postives = 261/284 (91.90%), Query Frame = 1
Query:    4 IADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            IAD+T ++EQET +G R V ++KGDE+WRITAQVAIMTDL+YADLT +LNQ TQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMM+LLRS   GLITMLPNLMPIGV+FGLLSWM ++VDIGTMITASVALGIAVDGTLHLLTWFKIGI+EGK+K EAVAAAL HCGPAMWQTSA V ISLAMLYPAELLLVSRFG+LMCALI AALLADIIFLPALLAGPLG+LIV+S K+E++  E  P+LQ+GKE+KPHLSH VKR+QSE+S ET
Sbjct:  166 IADNTVEMEQETDHGTRSVVVEKGDELWRITAQVAIMTDLDYADLTRDLNQATQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMILLRSTLGGLITMLPNLMPIGVVFGLLSWMRISVDIGTMITASVALGIAVDGTLHLLTWFKIGIQEGKTKGEAVAAALCHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGVLMCALIVAALLADIIFLPALLAGPLGSLIVSSLKKEREQAENAPVLQDGKETKPHLSHAVKRSQSERSLET 449          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: UPI0012D400E2 (MMPL family transporter n=1 Tax=Gimesia maris TaxID=122 RepID=UPI0012D400E2)

HSP 1 Score: 439 bits (1130), Expect = 6.160e-148
Identity = 236/285 (82.81%), Postives = 261/285 (91.58%), Query Frame = 1
Query:    1 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            ++AD T ++EQET  G R V ++KGDE+WRITAQVAIMTDL+Y DLT++LNQ+TQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAF VIA+VMMVLLRS   GLITMLPNLMPIGVIFGLLSWM ++VDIGTMITASVALGIAVDGTLHLLTWFKIGI+EGK+KSEAVAAALGHCGPAMWQTSA V ISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLG+LIV S  +E++  E  PLLQ+GKE+KPHLSH +KR+QSE+S ET
Sbjct:  412 HVADKTVEMEQETDYGTRTVVVEKGDELWRITAQVAIMTDLDYGDLTHDLNQMTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFIVIAIVMMVLLRSILGGLITMLPNLMPIGVIFGLLSWMRISVDIGTMITASVALGIAVDGTLHLLTWFKIGIQEGKTKSEAVAAALGHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGSLIVASLNKERELAESVPLLQDGKETKPHLSHAIKRSQSEKSLET 696          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A2E2C563_9PLAN (SSD domain-containing protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C563_9PLAN)

HSP 1 Score: 443 bits (1140), Expect = 2.180e-146
Identity = 236/284 (83.10%), Postives = 262/284 (92.25%), Query Frame = 1
Query:    4 IADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            IAD+T ++EQET +G R V ++KGDE+WRITAQVAIMTDL+YADLT +LNQ TQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMM+LLRS   GLITMLPNLMPIGV+FGLLSWM ++VDIGTMITASVALGIAVDGTLHLLTWFKIGI+EGK+K EAVAAALGHCGPAMWQTSA V ISLAMLYPAELLLVSRFG+LMCALI AALLADIIFLPALLAGPLG+LIV+S K+E++  E  P+LQ+GKE+KPHLSH VKR+QSE+S ET
Sbjct:  673 IADNTVEMEQETDHGTRSVVVEKGDELWRITAQVAIMTDLDYADLTRDLNQATQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMILLRSTLGGLITMLPNLMPIGVVFGLLSWMRISVDIGTMITASVALGIAVDGTLHLLTWFKIGIQEGKTKGEAVAAALGHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGVLMCALIVAALLADIIFLPALLAGPLGSLIVSSLKKEREQAENAPVLQDGKETKPHLSHAVKRSQSERSLET 956          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A517R9Q8_9PLAN (MMPL family protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9Q8_9PLAN)

HSP 1 Score: 443 bits (1140), Expect = 3.220e-146
Identity = 242/286 (84.62%), Postives = 261/286 (91.26%), Query Frame = 1
Query:    1 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATE-KHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            +IAD + DLEQE+ANG R V ++KGDEMWRITAQVAIMTDLNY  LT +LNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMM+LLRSPTAGLITMLPNLMPIGV+FGL+SWM + VDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGK+KSEAVAAALGHCGPAMWQTSA V ISLAMLYPAELLLVSRFGILMCALI AALLADIIFLPALLAGPLG+LIV S ++EQ+A   K PLLQEGK +KPHL   +KR QSE++ ET
Sbjct:  687 HIADDSIDLEQESANGPREVTVKKGDEMWRITAQVAIMTDLNYGHLTRDLNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMILLRSPTAGLITMLPNLMPIGVVFGLISWMKMPVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKTKSEAVAAALGHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGILMCALIAAALLADIIFLPALLAGPLGSLIVTSLRKEQEAAAAKAPLLQEGKATKPHLPQAIKRTQSEKTLET 972          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A3D3R2E4_9PLAN (SSD domain-containing protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A3D3R2E4_9PLAN)

HSP 1 Score: 441 bits (1134), Expect = 2.470e-145
Identity = 237/285 (83.16%), Postives = 262/285 (91.93%), Query Frame = 1
Query:    1 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            ++AD T ++EQET  G R V ++KGDE+WRITAQVAIM+DL+Y DLT++LNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAF VIA+VMMVLLRS   GLITMLPNLMPIGVIFGLLSWM ++VDIGTMITASVALGIAVDGTLHLLTWFKIGI+EGK+KSEAVAAALGHCGPAMWQTSA V ISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLG+LIV S K+E++  E  PLLQ+GKE+KPHLSH +KR+QSE+S ET
Sbjct:  687 HVADKTVEMEQETDYGTRTVVVEKGDELWRITAQVAIMSDLDYGDLTHDLNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFIVIAIVMMVLLRSILGGLITMLPNLMPIGVIFGLLSWMRISVDIGTMITASVALGIAVDGTLHLLTWFKIGIQEGKTKSEAVAAALGHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGSLIVASLKKERELAESVPLLQDGKETKPHLSHAIKRSQSEKSLET 971          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A517WT92_9PLAN (MMPL family protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WT92_9PLAN)

HSP 1 Score: 436 bits (1121), Expect = 1.450e-143
Identity = 234/285 (82.11%), Postives = 259/285 (90.88%), Query Frame = 1
Query:    1 NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            ++AD    LEQETANGAR V + +GDE+WRIT+QVAIMTDLNY DLT +LNQVTQSVLRDHAGTTH+VTGTIPLFLRTQ+AVLESLIKSFGLAFAVIAVVMM+LLRSP AGLITMLPNLMPIGV+FGLL WM++++DIGTMITASVALGIAVDGTLHLLTWFKIGIEEGK+K EAVAAALGHCGPAMWQTSA VAISLAMLYPA+LLLVSRFGILMCAL+TAAL+ADIIFLPALLAGPLG+LI  S K+E  A    PLLQEGK + PHL H +KRAQSE++FET
Sbjct:  673 HLADREVVLEQETANGARSVPVNEGDELWRITSQVAIMTDLNYGDLTRDLNQVTQSVLRDHAGTTHIVTGTIPLFLRTQEAVLESLIKSFGLAFAVIAVVMMILLRSPLAGLITMLPNLMPIGVVFGLLCWMNISIDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKTKQEAVAAALGHCGPAMWQTSAAVAISLAMLYPADLLLVSRFGILMCALVTAALVADIIFLPALLAGPLGSLIETSLKKEAAADV--PLLQEGKATMPHLQHAIKRAQSEKTFET 955          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A518I6L9_9PLAN (MMPL family protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I6L9_9PLAN)

HSP 1 Score: 436 bits (1120), Expect = 2.090e-143
Identity = 236/284 (83.10%), Postives = 254/284 (89.44%), Query Frame = 1
Query:    4 IADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET 855
            IAD   ++EQETANG R V + KGDE+WRITAQVAIMTDLNY  LT +LNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMM+LLRSPTAGLITMLPNLMPIGV+FGL+SWM + VDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGK+KSEAVAAA+GHCGPAMWQTSA V ISLAMLYPAELLLVSRFGILM ALI AALLADIIFLPALLAGPLG+LIV S K++Q A    PLLQ+GK +KPHL   +KR QSE + ET
Sbjct:  673 IADEAIEMEQETANGDRSVAVNKGDELWRITAQVAIMTDLNYGHLTRDLNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMILLRSPTAGLITMLPNLMPIGVVFGLISWMKMPVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKTKSEAVAAAMGHCGPAMWQTSAAVGISLAMLYPAELLLVSRFGILMSALIAAALLADIIFLPALLAGPLGSLIVASHKKDQAAAANAPLLQDGKATKPHLPQAIKRTQSETTLET 956          
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Match: A0A2E7CZT0_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CZT0_9PLAN)

HSP 1 Score: 293 bits (750), Expect = 2.080e-89
Identity = 161/231 (69.70%), Postives = 194/231 (83.98%), Query Frame = 1
Query:   73 GDEMWRITAQVAIMTDLNYADLTNELNQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVVMMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGIAVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAMLYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKREQKATE 765
            GDE+WRITAQV +MTD++Y  LT++++++   VL   +G  H+VTGTIPLFLRTQ+AVLESLI+SFGLAF +IAVVMMVLLR+P AGLI MLPNLMP+GV+FGL++W  +A+DIG+MITASVALGIA+DGTLHLLTWFK G+  G S+ EAV+AAL HCGPAMWQTSA+V I L ML   +LLLVSRFG++M ALI AAL+ADIIFLPALLAGPLG LI  S +  QKA E
Sbjct:  643 GDELWRITAQVLVMTDMDYTVLTDDVDRIATEVLGP-SGANHVVTGTIPLFLRTQKAVLESLIRSFGLAFCIIAVVMMVLLRNPLAGLIAMLPNLMPVGVVFGLIAWNGLAIDIGSMITASVALGIAIDGTLHLLTWFKEGVGRGLSRDEAVSAALAHCGPAMWQTSAIVGIGLMMLSGCDLLLVSRFGLIMAALIGAALVADIIFLPALLAGPLGRLIERSVQA-QKAKE 871          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76344.17998.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KFP0_9PLAN1.540e-17799.65SSD domain-containing protein n=10 Tax=Bacteria Ta... [more]
A0A350K592_9PLAN6.440e-15283.16MMPL domain-containing protein n=1 Tax=Planctomyce... [more]
A0A355GAF6_9PLAN1.760e-15182.75MMPL domain-containing protein (Fragment) n=1 Tax=... [more]
UPI0012D400E26.160e-14882.81MMPL family transporter n=1 Tax=Gimesia maris TaxI... [more]
A0A2E2C563_9PLAN2.180e-14683.10SSD domain-containing protein n=3 Tax=Planctomycet... [more]
A0A517R9Q8_9PLAN3.220e-14684.62MMPL family protein n=1 Tax=Gimesia alba TaxID=252... [more]
A0A3D3R2E4_9PLAN2.470e-14583.16SSD domain-containing protein n=6 Tax=Gimesia TaxI... [more]
A0A517WT92_9PLAN1.450e-14382.11MMPL family protein n=2 Tax=Gimesia aquarii TaxID=... [more]
A0A518I6L9_9PLAN2.090e-14383.10MMPL family protein n=1 Tax=Gimesia fumaroli TaxID... [more]
A0A2E7CZT0_9PLAN2.080e-8969.70Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76344contigM-pyrifera_M_contig76344:175..1032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score444.5
Seed ortholog evalue3.7e-122
Seed eggNOG ortholog344747.PM8797T_06130
KEGG koko:K07003
Hectar predicted targeting categoryother localisation
EggNOG free text desc.growth of symbiont in host cell
EggNOG OGsCOG1033@1,COG1033@2
COG Functional cat.S
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size858
Cds size858
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816662.773457-CDS-M-pyrifera_M_contig76344:174..10321622816662.773457-CDS-M-pyrifera_M_contig76344:174..1032Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76344 175..1032 -
1692278105.535633-CDS-M-pyrifera_M_contig76344:174..10321692278105.535633-CDS-M-pyrifera_M_contig76344:174..1032Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76344 175..1032 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76344.17998.1prot_M-pyrifera_M_contig76344.17998.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76344 175..1032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76344.17998.1

>prot_M-pyrifera_M_contig76344.17998.1 ID=prot_M-pyrifera_M_contig76344.17998.1|Name=mRNA_M-pyrifera_M_contig76344.17998.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=286bp
NIADHTADLEQETANGARMVDIQKGDEMWRITAQVAIMTDLNYADLTNEL
NQVTQSVLRDHAGTTHLVTGTIPLFLRTQQAVLESLIKSFGLAFAVIAVV
MMVLLRSPTAGLITMLPNLMPIGVIFGLLSWMHVAVDIGTMITASVALGI
AVDGTLHLLTWFKIGIEEGKSKSEAVAAALGHCGPAMWQTSAVVAISLAM
LYPAELLLVSRFGILMCALITAALLADIIFLPALLAGPLGTLIVNSQKRE
QKATEKHPLLQEGKESKPHLSHVVKRAQSEQSFET*
back to top

mRNA from alignment at M-pyrifera_M_contig76344:175..1032-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76344.17998.1 ID=mRNA_M-pyrifera_M_contig76344.17998.1|Name=mRNA_M-pyrifera_M_contig76344.17998.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig76344:175..1032- (Macrocystis pyrifera P11B4 male)
AATATTGCCGACCACACTGCGGATCTGGAGCAGGAAACCGCGAACGGCGC ACGAATGGTCGACATTCAGAAGGGTGACGAAATGTGGCGGATCACCGCAC AGGTCGCCATTATGACCGATCTCAACTACGCGGATCTAACGAATGAATTG AACCAGGTAACGCAGTCTGTCTTACGTGATCATGCCGGGACGACGCATCT GGTGACCGGAACGATTCCCCTGTTTCTGCGAACCCAGCAGGCTGTATTGG AGAGCTTGATCAAAAGCTTTGGGCTGGCCTTTGCTGTCATCGCTGTGGTA ATGATGGTGCTGCTGCGGAGTCCGACAGCAGGTCTGATTACGATGTTGCC GAACCTGATGCCCATTGGTGTGATCTTCGGGCTGTTGTCCTGGATGCACG TGGCCGTCGATATTGGAACGATGATTACCGCATCCGTCGCACTGGGGATC GCTGTGGACGGCACTCTGCATCTGCTGACCTGGTTCAAAATCGGAATCGA AGAAGGCAAATCCAAGAGTGAAGCGGTGGCTGCAGCGCTGGGGCATTGTG GCCCTGCGATGTGGCAGACCAGTGCCGTGGTGGCGATCAGTCTGGCAATG CTCTATCCGGCAGAATTACTGCTGGTAAGTCGCTTCGGCATTCTCATGTG TGCGTTGATTACTGCAGCACTGCTGGCCGACATCATCTTTCTGCCCGCAC TGCTGGCTGGCCCCTTGGGAACGCTGATTGTGAACTCGCAGAAACGAGAG CAGAAAGCGACTGAGAAACATCCGCTGTTGCAGGAAGGGAAAGAGTCAAA GCCCCATCTGTCACATGTGGTCAAGCGGGCTCAGTCTGAGCAGTCTTTTG AGACGTAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig76344:175..1032-

>mRNA_M-pyrifera_M_contig76344.17998.1 ID=mRNA_M-pyrifera_M_contig76344.17998.1|Name=mRNA_M-pyrifera_M_contig76344.17998.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1716bp|location=Sequence derived from alignment at M-pyrifera_M_contig76344:175..1032- (Macrocystis pyrifera P11B4 male)
AATATTGCCGACCACACTGCGGATCTGGAGCAGGAAACCGCGAACGGCGC
ACGAATGGTCGACATTCAGAAGGGTGACGAAATGTGGCGGATCACCGCAC
AGGTCGCCATTATGACCGATCTCAACTACGCGGATCTAACGAATGAATTG
AACCAGGTAACGCAGTCTGTCTTACGTGATCATGCCGGGACGACGCATCT
GGTGACCGGAACGATTCCCCTGTTTCTGCGAACCCAGCAGGCTGTATTGG
AGAGCTTGATCAAAAGCTTTGGGCTGGCCTTTGCTGTCATCGCTGTGGTA
ATGATGGTGCTGCTGCGGAGTCCGACAGCAGGTCTGATTACGATGTTGCC
GAACCTGATGCCCATTGGTGTGATCTTCGGGCTGTTGTCCTGGATGCACG
TGGCCGTCGATATTGGAACGATGATTACCGCATCCGTCGCACTGGGGATC
GCTGTGGACGGCACTCTGCATCTGCTGACCTGGTTCAAAATCGGAATCGA
AGAAGGCAAATCCAAGAGTGAAGCGGTGGCTGCAGCGCTGGGGCATTGTG
GCCCTGCGATGTGGCAGACCAGTGCCGTGGTGGCGATCAGTCTGGCAATG
CTCTATCCGGCAGAATTACTGCTGGTAAGTCGCTTCGGCATTCTCATGTG
TGCGTTGATTACTGCAGCACTGCTGGCCGACATCATCTTTCTGCCCGCAC
TGCTGGCTGGCCCCTTGGGAACGCTGATTGTGAACTCGCAGAAACGAGAG
CAGAAAGCGACTGAGAAACATCCGCTGTTGCAGGAAGGGAAAGAGTCAAA
GCCCCATCTGTCACATGTGGTCAAGCGGGCTCAGTCTGAGCAGTCTTTTG
AGACGTAAAATATTGCCGACCACACTGCGGATCTGGAGCAGGAAACCGCG
AACGGCGCACGAATGGTCGACATTCAGAAGGGTGACGAAATGTGGCGGAT
CACCGCACAGGTCGCCATTATGACCGATCTCAACTACGCGGATCTAACGA
ATGAATTGAACCAGGTAACGCAGTCTGTCTTACGTGATCATGCCGGGACG
ACGCATCTGGTGACCGGAACGATTCCCCTGTTTCTGCGAACCCAGCAGGC
TGTATTGGAGAGCTTGATCAAAAGCTTTGGGCTGGCCTTTGCTGTCATCG
CTGTGGTAATGATGGTGCTGCTGCGGAGTCCGACAGCAGGTCTGATTACG
ATGTTGCCGAACCTGATGCCCATTGGTGTGATCTTCGGGCTGTTGTCCTG
GATGCACGTGGCCGTCGATATTGGAACGATGATTACCGCATCCGTCGCAC
TGGGGATCGCTGTGGACGGCACTCTGCATCTGCTGACCTGGTTCAAAATC
GGAATCGAAGAAGGCAAATCCAAGAGTGAAGCGGTGGCTGCAGCGCTGGG
GCATTGTGGCCCTGCGATGTGGCAGACCAGTGCCGTGGTGGCGATCAGTC
TGGCAATGCTCTATCCGGCAGAATTACTGCTGGTAAGTCGCTTCGGCATT
CTCATGTGTGCGTTGATTACTGCAGCACTGCTGGCCGACATCATCTTTCT
GCCCGCACTGCTGGCTGGCCCCTTGGGAACGCTGATTGTGAACTCGCAGA
AACGAGAGCAGAAAGCGACTGAGAAACATCCGCTGTTGCAGGAAGGGAAA
GAGTCAAAGCCCCATCTGTCACATGTGGTCAAGCGGGCTCAGTCTGAGCA
GTCTTTTGAGACGTAA
back to top