mRNA_M-pyrifera_M_contig76283.17985.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76283.17985.1
Unique NamemRNA_M-pyrifera_M_contig76283.17985.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: A0A0G4HIQ0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HIQ0_9ALVE)

HSP 1 Score: 90.9 bits (224), Expect = 6.760e-19
Identity = 74/191 (38.74%), Postives = 97/191 (50.79%), Query Frame = 1
Query:   37 SALSKDIIALLRPPDRTPSDSRNDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPT--APHVSHFPLSDSTRVDILPLLPSIAEAISRGMDKGPT-LVHCSAGASRSATAATAFLVLH--REKSLLEALQIVRKHRPIAYPNKSFFRALIDLETT---HRGSTTLPTAALALHEDDT 585
            SA S +     +PP  TP     +A      LYLG+S AA++S W     I  V+N ADDV   S+              L D T  DI P   S  + I   + +G + LVHC+AG SRSA+    FL+    R+ SL++A+  VR+ RP+ YPNK FF ALI LE T    R  + LP   + LHED T
Sbjct:   60 SASSSEEQTAHKPPAYTP-----EARSASATLYLGSSSAAKDSTWLFNAKIGFVLNCADDVKAPSELYDHLGVQWTQLSALKDVTSCDISPYFDSCIKTIGEKLSQGVSVLVHCAAGMSRSASIVIGFLISPEGRQMSLVDAVHHVRERRPLVYPNKGFFLALIRLEGTLWPDRPQSILP-EMIELHEDCT 244          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: A0A672GVU9_SALFA (Zgc:153044 n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GVU9_SALFA)

HSP 1 Score: 80.9 bits (198), Expect = 8.460e-16
Identity = 50/141 (35.46%), Postives = 75/141 (53.19%), Query Frame = 1
Query:  130 LYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLSDSTRVDILPLLPSIAEAISRGMDK-GPTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLETTHRGSTTL 549
            LYL N  AA ++       I  ++NV +  +P   A P   H  H P+SD+    +      +A+ I    ++ G TLVHC+AG SRSA    A+L+ H + +LLEA   V+  RP+A PN+ F+R L+  E   RG  ++
Sbjct:   19 LYLSNVRAAHDAAQLTGNDITCIINVTE--TPRDGAPPPGVHYLHIPVSDAPEARLCDHFDGVADRIQSTAERSGRTLVHCNAGVSRSAALCMAYLMKHGDATLLEAHGRVKACRPVARPNRGFWRQLVQYERELRGRNSV 157          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: H3BHD3_LATCH (Dual specificity protein phosphatase n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BHD3_LATCH)

HSP 1 Score: 79.0 bits (193), Expect = 8.300e-15
Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  103 NDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLS--DSTRVDILPLLPSIAEAISRGMDKG--PTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLETTHR 534
            N ADE+ PGLYLG+ D A N     + GI  ++N                ++++F +   DS   D+ P     A+ I + + +     LVHC+ G SRSAT   A+L++H   +L+EA++ V+ HR I  PN+ F R L++L+ T R
Sbjct:   45 NHADEVWPGLYLGDQDIAANRRELTKLGITHILNACHSKWRGGAEYYEGMNITYFGVEAHDSPTFDMSPHFYPAADFIHQALQETGRKILVHCAVGVSRSATLVLAYLMIHHHMTLVEAIKTVKDHRGII-PNRGFLRQLVNLDNTLR 191          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: H3CKW3_TETNG (Uncharacterized protein n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CKW3_TETNG)

HSP 1 Score: 77.0 bits (188), Expect = 3.860e-14
Identity = 54/143 (37.76%), Postives = 77/143 (53.85%), Query Frame = 1
Query:  130 LYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHF--PLSDSTRVDILPLLPSIAEAIS-RGMDKGPTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLETTHRGSTTL 549
            LYL +  AA +S       I  ++NV++    S   +P  P V +F  P+ DS    +      +A+ I  R    G TLVHC+AG SRSA    A+L+ HR+ SLLEA   V++ RP+A PN  F+  LI  ET  RG +++
Sbjct:   27 LYLSSFRAAEDSRQLIRCNITCIINVSE----SKSGTPQLPGVEYFHIPVPDSPLAPLGEHFDEVADKIQLRAAHGGRTLVHCNAGVSRSAALCMAYLLKHRDVSLLEAHGWVKRCRPLARPNTGFWEQLIRYETELRGHSSV 165          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: A0A165ZYV9_EXIGL (Protein-serine/threonine phosphatase n=2 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A165ZYV9_EXIGL)

HSP 1 Score: 77.4 bits (189), Expect = 5.380e-14
Identity = 49/137 (35.77%), Postives = 75/137 (54.74%), Query Frame = 1
Query:  115 ELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSP---SSDASPTAPHVS-HFPLSDSTRVDILPLLPSIAEAISRGMDKG-PTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRAL 510
            E++PGL+LG+ DAAR+++  R  GI  V+ +  +++     + A+P  P  + H P+ D     +LP +P   E I   +  G   LVHC  G SRSA+   A+L+  R  +  EAL++VR  RP   PN  F + L
Sbjct:   33 EILPGLFLGSWDAARDTDALRAAGITHVLTLMRELALYKLDNLAAPDCPFTTLHLPIIDGAAFKLLPYVPRCIEFIDAALSGGGKVLVHCFQGVSRSASVVAAYLMAKRGLARDEALELVRAARPAIQPNLGFMKQL 169          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: A0A7J7F2T0_DICBM (Dual specificity protein phosphatase n=4 Tax=Laurasiatheria TaxID=314145 RepID=A0A7J7F2T0_DICBM)

HSP 1 Score: 76.3 bits (186), Expect = 1.140e-13
Identity = 52/144 (36.11%), Postives = 78/144 (54.17%), Query Frame = 1
Query:  103 NDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLS--DSTRVDILPLLPSIAEAISRGMDK--GPTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLE 522
            N ADE+ PGLYLG+ D A NS   R  GI  V+N +      +  +     + +  +   DS   D+     + A+ I R + +  G  LVHC+ G SRSAT   A+L+L+   +L+EA++ V+ HR I  PN+ F R L+ L+
Sbjct:   60 NHADEVWPGLYLGDQDIANNSRELRRLGITHVLNASHSRWRGTPEAYQGLGIRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHRLTLVEAIKKVKDHRGII-PNRGFLRQLLALD 202          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: H0WTE5_OTOGA (Dual specificity protein phosphatase n=3 Tax=Strepsirrhini TaxID=376911 RepID=H0WTE5_OTOGA)

HSP 1 Score: 76.3 bits (186), Expect = 1.140e-13
Identity = 53/144 (36.81%), Postives = 77/144 (53.47%), Query Frame = 1
Query:  103 NDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLS--DSTRVDILPLLPSIAEAISRGMDK--GPTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLE 522
            N ADE+ PGLYLG+ D A N    R  GI  V+N +         +  A  + +  +   DS   DI     + A+ I R + +  G  LVHC+ G SRSAT   A+L+L+   +L+EA++ V+ HR I  PN+ F R L+ L+
Sbjct:   60 NHADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGPPEAYQALGIRYLGVEAHDSPAFDISIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHRLTLVEAIKKVKDHRGII-PNRGFLRQLLALD 202          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: UPI000529628C (dual specificity protein phosphatase 26 n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529628C)

HSP 1 Score: 75.9 bits (185), Expect = 1.190e-13
Identity = 50/146 (34.25%), Postives = 73/146 (50.00%), Query Frame = 1
Query:  103 NDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLS--DSTRVDILPLLPSIAEAISRGMDKGPTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLETTHR 534
            N ADE+ PGLYLG+ D A N        I  V+N +               + +  +   DS   D+ P     AE I + +++G  LVHC+ G SRSAT   A+L++     L+EA++ V+ HR I  PN+ F R L+ L+   R
Sbjct:   46 NHADEVWPGLYLGDQDIAANRRELAHLRITHVLNASHSKWRGGAEYYEGTGIRYLGIEAHDSPSFDMSPYFYPAAEFIHQALNEGRILVHCAVGVSRSATLVLAYLMIRHHMPLVEAIKTVKDHRGII-PNRGFLRQLVALDNALR 190          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: A0A1B6DT61_9HEMI (Uncharacterized protein n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DT61_9HEMI)

HSP 1 Score: 75.9 bits (185), Expect = 2.410e-13
Identity = 53/167 (31.74%), Postives = 84/167 (50.30%), Query Frame = 1
Query:   61 ALLRPPD-RTPSD-SRNDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLSDSTRVDILPLLPSIAEAISRGMDKGPT-LVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLETTHRGSTTLP 552
            A+L P D  TP+D   + A  ++P LY+GN+  A +       GI  V+NV   +    ++          P SDS   ++        + I      G + LVHC AG SRS T A A+++ HR+ +++EA ++V+  RPI  PN +F   L++LE   R   ++P
Sbjct:   48 AVLPPTDCPTPADIDSHPASRVLPFLYIGNATDAADLATLNALGISRVLNVTSQLPGYHESCGIT--YKQLPASDSGHQNLKQYFEEAYQFIEEARKSGASVLVHCQAGVSRSPTIAIAYIMKHRQLTMVEAYKVVKNKRPIISPNLNFMGQLLELEQGLRADASVP 212          
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Match: A0A8B7H4C5_MICMU (Protein-serine/threonine phosphatase n=3 Tax=Microcebus murinus TaxID=30608 RepID=A0A8B7H4C5_MICMU)

HSP 1 Score: 76.6 bits (187), Expect = 2.440e-13
Identity = 54/150 (36.00%), Postives = 80/150 (53.33%), Query Frame = 1
Query:  103 NDADELIPGLYLGNSDAARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLS--DSTRVDILPLLPSIAEAISRGMDK--GPTLVHCSAGASRSATAATAFLVLHREKSLLEALQIVRKHRPIAYPNKSFFRALIDLETTHRGS 540
            N ADE+ PGLYLG+ D A N    R  GI  V+N + +       +  A  + +  +   DS   D+     + A+ I R + +  G  LVHC+ G SRSAT   A+L+L+   +L+EA++ V+ HR I  PN+ F R L+ L+   R S
Sbjct:  135 NHADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHNRWRGPPEAYQALGIRYLGVEAHDSPAFDMSVHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHRLTLVEAIKKVKDHRGII-PNRGFLRQLLALDRRLRQS 283          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76283.17985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0G4HIQ0_9ALVE6.760e-1938.74Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A672GVU9_SALFA8.460e-1635.46Zgc:153044 n=2 Tax=Salarias fasciatus TaxID=181472... [more]
H3BHD3_LATCH8.300e-1534.46Dual specificity protein phosphatase n=1 Tax=Latim... [more]
H3CKW3_TETNG3.860e-1437.76Uncharacterized protein n=2 Tax=Tetraodon nigrovir... [more]
A0A165ZYV9_EXIGL5.380e-1435.77Protein-serine/threonine phosphatase n=2 Tax=Exidi... [more]
A0A7J7F2T0_DICBM1.140e-1336.11Dual specificity protein phosphatase n=4 Tax=Laura... [more]
H0WTE5_OTOGA1.140e-1336.81Dual specificity protein phosphatase n=3 Tax=Strep... [more]
UPI000529628C1.190e-1334.25dual specificity protein phosphatase 26 n=1 Tax=Co... [more]
A0A1B6DT61_9HEMI2.410e-1331.74Uncharacterized protein n=1 Tax=Clastoptera arizon... [more]
A0A8B7H4C5_MICMU2.440e-1336.00Protein-serine/threonine phosphatase n=3 Tax=Micro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76283contigM-pyrifera_M_contig76283:383..970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score92.8
Seed ortholog evalue1.9e-16
Seed eggNOG ortholog160860.XP_007349767.1
KEGG koko:K14819
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Dual specificity phosphatase, catalytic domain
EggNOG OGs39TUU@33154,3Q309@4751,COG2453@1,KOG1716@2759
EC3.1.3.16,3.1.3.48
COG Functional cat.V
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03009
Exons1
Model size588
Cds size588
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816662.015054-CDS-M-pyrifera_M_contig76283:382..9701622816662.015054-CDS-M-pyrifera_M_contig76283:382..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76283 383..970 -
1692278105.031729-CDS-M-pyrifera_M_contig76283:382..9701692278105.031729-CDS-M-pyrifera_M_contig76283:382..970Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76283 383..970 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76283.17985.1prot_M-pyrifera_M_contig76283.17985.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76283 383..970 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76283.17985.1

>prot_M-pyrifera_M_contig76283.17985.1 ID=prot_M-pyrifera_M_contig76283.17985.1|Name=mRNA_M-pyrifera_M_contig76283.17985.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=196bp
EKQRKSKEKELGSALSKDIIALLRPPDRTPSDSRNDADELIPGLYLGNSD
AARNSEWQREKGILEVVNVADDVSPSSDASPTAPHVSHFPLSDSTRVDIL
PLLPSIAEAISRGMDKGPTLVHCSAGASRSATAATAFLVLHREKSLLEAL
QIVRKHRPIAYPNKSFFRALIDLETTHRGSTTLPTAALALHEDDT*
back to top

mRNA from alignment at M-pyrifera_M_contig76283:383..970-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76283.17985.1 ID=mRNA_M-pyrifera_M_contig76283.17985.1|Name=mRNA_M-pyrifera_M_contig76283.17985.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig76283:383..970- (Macrocystis pyrifera P11B4 male)
GAGAAACAGAGGAAATCGAAGGAAAAGGAGCTCGGGAGCGCTCTTTCGAA AGATATCATTGCATTGCTGCGGCCTCCTGACCGCACTCCTTCCGACTCTC GCAACGACGCGGATGAGTTGATTCCTGGCCTGTACTTGGGCAACTCAGAT GCGGCCAGGAACTCGGAATGGCAGCGGGAGAAGGGGATTTTGGAGGTCGT GAACGTTGCAGACGATGTTTCTCCCTCTTCCGACGCTTCCCCGACTGCTC CGCACGTGTCCCACTTTCCGCTGTCGGATTCCACGCGGGTGGACATCCTC CCACTGTTGCCATCGATCGCAGAGGCCATTTCTCGAGGGATGGACAAAGG ACCGACGCTGGTACACTGCAGTGCTGGGGCATCACGCTCTGCCACAGCCG CCACTGCCTTCCTCGTCCTGCACCGCGAGAAATCGCTGCTCGAAGCGCTG CAGATCGTGCGCAAACACCGACCAATCGCATACCCCAACAAATCCTTCTT CCGAGCTCTCATCGACCTCGAAACGACCCACCGAGGCTCCACCACCCTCC CAACTGCCGCTCTTGCACTCCATGAAGATGATACATGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig76283:383..970-

>mRNA_M-pyrifera_M_contig76283.17985.1 ID=mRNA_M-pyrifera_M_contig76283.17985.1|Name=mRNA_M-pyrifera_M_contig76283.17985.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1176bp|location=Sequence derived from alignment at M-pyrifera_M_contig76283:383..970- (Macrocystis pyrifera P11B4 male)
GAGAAACAGAGGAAATCGAAGGAAAAGGAGCTCGGGAGCGCTCTTTCGAA
AGATATCATTGCATTGCTGCGGCCTCCTGACCGCACTCCTTCCGACTCTC
GCAACGACGCGGATGAGTTGATTCCTGGCCTGTACTTGGGCAACTCAGAT
GCGGCCAGGAACTCGGAATGGCAGCGGGAGAAGGGGATTTTGGAGGTCGT
GAACGTTGCAGACGATGTTTCTCCCTCTTCCGACGCTTCCCCGACTGCTC
CGCACGTGTCCCACTTTCCGCTGTCGGATTCCACGCGGGTGGACATCCTC
CCACTGTTGCCATCGATCGCAGAGGCCATTTCTCGAGGGATGGACAAAGG
ACCGACGCTGGTACACTGCAGTGCTGGGGCATCACGCTCTGCCACAGCCG
CCACTGCCTTCCTCGTCCTGCACCGCGAGAAATCGCTGCTCGAAGCGCTG
CAGATCGTGCGCAAACACCGACCAATCGCATACCCCAACAAATCCTTCTT
CCGAGCTCTCATCGACCTCGAAACGACCCACCGAGGCTCCACCACCCTCC
CAACTGCCGCTCTTGCACTCCATGAAGATGATACATGAGAGAAACAGAGG
AAATCGAAGGAAAAGGAGCTCGGGAGCGCTCTTTCGAAAGATATCATTGC
ATTGCTGCGGCCTCCTGACCGCACTCCTTCCGACTCTCGCAACGACGCGG
ATGAGTTGATTCCTGGCCTGTACTTGGGCAACTCAGATGCGGCCAGGAAC
TCGGAATGGCAGCGGGAGAAGGGGATTTTGGAGGTCGTGAACGTTGCAGA
CGATGTTTCTCCCTCTTCCGACGCTTCCCCGACTGCTCCGCACGTGTCCC
ACTTTCCGCTGTCGGATTCCACGCGGGTGGACATCCTCCCACTGTTGCCA
TCGATCGCAGAGGCCATTTCTCGAGGGATGGACAAAGGACCGACGCTGGT
ACACTGCAGTGCTGGGGCATCACGCTCTGCCACAGCCGCCACTGCCTTCC
TCGTCCTGCACCGCGAGAAATCGCTGCTCGAAGCGCTGCAGATCGTGCGC
AAACACCGACCAATCGCATACCCCAACAAATCCTTCTTCCGAGCTCTCAT
CGACCTCGAAACGACCCACCGAGGCTCCACCACCCTCCCAACTGCCGCTC
TTGCACTCCATGAAGATGATACATGA
back to top