mRNA_M-pyrifera_M_contig76277.17981.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A349B7B6_9ACTN (PGRP domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B7B6_9ACTN) HSP 1 Score: 141 bits (356), Expect = 6.150e-36 Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 1 Query: 16 QWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFYVAA 558 +W G R+A T ++++ ++G ++D++Y LGR+ + G YWL VL +GI FYGS EY++R GG E F+R+LY +LL RE + GL YW G L PPD+ASGFY+SLESR DRA +Y+ VLGR + A+++L DD+ +A EL S+EFY A Sbjct: 424 RWLSRADNDGLRAAAT-GMARSETYSGVIIDDLYQRVLGRSAEQEGKDYWLGVLASG-VRIETVGISFYGSKEYFDRKGGA-EPFVRSLYENLLFREADQKGLDYWVGMLQNRRALPPDVASGFYLSLESRLDRAARVYEDVLGRRPSGQAQQHWAQQLLSTDDVRMAIELSLSDEFYERA 601
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A7Y2N9T2_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N9T2_9ACTN) HSP 1 Score: 140 bits (354), Expect = 2.760e-35 Identity = 77/181 (42.54%), Postives = 104/181 (57.46%), Query Frame = 1 Query: 7 ELSQWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFY 549 EL W G+ +A+ SA+ +T F S V +MY++ALGR D G AYW ++L + ++G+YFYGS E + RSGG E ++ LY LLHR P+A+G AYW G L P + +GFY S+ESRRDRA LY RV G R++ A +L DDL VAA + S +Y Sbjct: 713 ELDHWRWKTDFRGT-TALGSAMVRTSGFTDSTVADMYASALGRPGDAKGLAYWSNLLNTGQLSIRDMGVYFYGSRELFQRSGGA-EGYVDKLYASLLHRSPDASGRAYWAGLLTSGKATPSQVTAGFYDSIESRRDRATRLYTRVAGAAPSEADRENWAGMLLKTDDLTVAANMIASPSYY 891
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A7Y2DJL4_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DJL4_9ACTN) HSP 1 Score: 139 bits (351), Expect = 7.050e-35 Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 88 FAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFY 549 F S+VD+MY ALGR PD AG YW ++L Q+ ++GIYF+GS E Y R+G + +++ +LY+ LLHR P+A G AYW L P ++ +GFY SLESRRDR +ALY+R+ G A A+ +L +DDL VAA++ S FY Sbjct: 761 FTDSIVDDMYRRALGRRPDAAGKRYWSELLNSQRITLRDMGIYFFGSTELYARAGSS-AAYVDSLYQALLHRAPDAAGRAYWAELLGSGRATPAEVTAGFYDSLESRRDRVNALYRRISGGSPSADQTQEWADDLLGSDDLTVAAQMIASPTFY 913
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A7V8X2U1_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V8X2U1_9ACTN) HSP 1 Score: 111 bits (277), Expect = 1.250e-25 Identity = 66/177 (37.29%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 28 HLQT----GGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEF 546 H+QT GSR A T AL+ + E+ ++ +Y +ALGR+ D AG W D L+ +++G FYGS EY++RSGG E F++ALY LL R + G+ YW G L IA+GFY SLESR R +++L DD+V+AA L S+E+ Sbjct: 220 HVQTVTGPSGSREAFTDALAHSDEWINVSLELLYQSALGRSGDAAGMRNWAD-LIRAGWRLSDVGGQFYGSEEYFSRSGGTPERFVQALYTALLGRAADQAGIDYWAGLLRSGQANTYFIAAGFYASLESRMGRVAGXXXXXXXXXXXXXXXXXXXDQLLRIDDVVLAATLAASDEY 395
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A349B0C9_9ACTN (DUF4214 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0C9_9ACTN) HSP 1 Score: 106 bits (264), Expect = 1.190e-23 Identity = 64/181 (35.36%), Postives = 94/181 (51.93%), Query Frame = 1 Query: 7 ELSQWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFY 549 E S+W + G R A+T AL+ + E+AGS VD++Y + LGR + AG A+W+ + T A + + YGS EYY SG F+ +Y +L R P+ G YW G LA + D+A+GFY S+ESR DR AL+ E++ D+ +A+ L S+E Y Sbjct: 59 ESSRWAATVALGD-REALTRALAASDEWAGSRVDQLYRSVLGRPSEPAGRAHWVGRIAAGHTLEA-VAAFLYGSDEYYGLSGSTPAGFVDRVYTGVLGRVPDDDGRRYWVGRLATGATRA-DVAAGFYASIESRSDRVTALFHXXXXXXXXXXXXXXXXEQVQRLGDVALASFLAASDEQY 236
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: UPI001B2CCC22 (DUF4214 domain-containing protein n=1 Tax=Microbacteriaceae bacterium TaxID=1873462 RepID=UPI001B2CCC22) HSP 1 Score: 98.2 bits (243), Expect = 2.040e-20 Identity = 62/189 (32.80%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 7 ELSQWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGN-DESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSA--AERILVADDLVVAAELGTS-EEFYVAAQ 561 E + W + T R+ L+ + E+ S+V+ Y LGR D G A+W + + + A + FY S EY+ GGN + +++ LY+ LL R P + YW G++ ++ +AS FY S+E RR R +ALY+R+LGR + A A+ +L DD+ +A L T+ +E+Y+ AQ Sbjct: 531 ETNYWSGWIATNP-RAGFIERLATSDEWVQSIVNRFYQDTLGRPGDANGVAFWSNQIKTGQMSVATVAAQFYSSNEYFVNIGGNTNATWVTDLYQKLLGRTPSTSERNYWVGQITGGAMNRLQVASYFYDSVEKRRLRVNALYERLLGRTLASTDSGYAYWADWLLTHDDIELAVVLATTGDEYYIRAQ 718
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A349B7M6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B7M6_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 3.020e-20 Identity = 56/170 (32.94%), Postives = 89/170 (52.35%), Query Frame = 1 Query: 55 AMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFYVAAQR 564 A+T+AL+ + E+AG+ V+E+Y T LGR+ D G A+W+ + A + YGS E++ R+G + F+ ALY D+L R + G+ YW+ LA+ + +A+ FY S ESR+DR R++ DD+ +A+ L S EF+ A R Sbjct: 347 ALTTALAVSDEWAGTRVNELYRTVLGRSADAGGRAHWVKAIASGGRLKA-VAAALYGSDEHFERNGRSPRRFVEALYEDILGRAGDENGIWYWQVRLAQG-LSRESVAASFYASAESRQDRVVXXXXXXXXXXXXXXXXXXXXXRLMSMDDVDLASSLAASSEFFDRASR 514
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A3E0W032_9MICO (Uncharacterized protein n=2 Tax=Subtercola boreus TaxID=120213 RepID=A0A3E0W032_9MICO) HSP 1 Score: 93.6 bits (231), Expect = 6.830e-19 Identity = 59/181 (32.60%), Postives = 85/181 (46.96%), Query Frame = 1 Query: 19 WYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFYVAAQ 561 W L TG RS + ++ + E+ +D Y LGRT + +G WL + ++ FY S EYY R GG D SF +ALY LL R+ A+ A+W G + G + + F+ S E+ R A+Y R LGR D G + L D V A L +S E++ +Q Sbjct: 331 WEGFLATGSPRSTIAASFVDSDEYRLKRIDAAYHDILGRTAEVSGRQNWLRAMQAGVITTDDIETSFYASDEYYQRHGGTDTSFAKALYNTLLERDGGASEYAFWAGLTRQQ--GRAWVTAQFWDSTETISKRVAAMYNRYLGRQPDPSGLSTWVALDLQLGDSGVRAGLTSSGEYFARSQ 509
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: A0A3E0VIY5_9MICO (Uncharacterized protein n=1 Tax=Subtercola boreus TaxID=120213 RepID=A0A3E0VIY5_9MICO) HSP 1 Score: 93.6 bits (231), Expect = 7.520e-19 Identity = 56/186 (30.11%), Postives = 88/186 (47.31%), Query Frame = 1 Query: 7 ELSQWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFYVAAQR 564 E+ W +L G R+++ + + E+ +D Y + L R PD AG AYWLD + ++ FY S EY + GG +S++ A+Y DLL R P + +++W A G I F+ S E+ R A+Y LGR D G + L D V + L +S+E++ A + Sbjct: 376 EVKGWAANLAAGAPRTSIAVGFADSDEYRLIRIDAAYHSILWRGPDAAGRAYWLDQMHRGVIRTEDIEKQFYASQEYVDNRGGTQQSWVGAIYLDLLKRNPSVSDISFWSR--AADQQGRVAITVSFWQSQETAERRVSAMYASYLGRTPDQGGLAAWTGYDLANGDSVTRSSLTSSDEYFTLAAK 559
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Match: UPI0019ABD71E (DUF4214 domain-containing protein n=2 Tax=Subtercola lobariae TaxID=1588641 RepID=UPI0019ABD71E) HSP 1 Score: 88.2 bits (217), Expect = 4.590e-17 Identity = 55/186 (29.57%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 4 TELSQWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAGSAYWLDVLVGQKTPFAELGIYFYGSAEYYNRSGGNDESFIRALYRDLLHREPEATGLAYWKGELAKSSVGPPDIASGFYVSLESRRDRADALYQRVLGRPADAVGRDSAAERILVADDLVVAAELGTSEEFYVAAQ 561 TE+S W G A+++ + E+ ++ Y T LGR D AG WL + + ++ FY S EY+N +GGN+ SF++A+Y LLHRE + A+W + + G + + F+ S E+ +R +Y+ LGR D G L D + A L S+E++ +Q Sbjct: 265 TEVSFWRAQFARGLPLGAVSTGFVTSDEYRLIRINAAYQTILGRGADPAGRLDWLHWMQQGRITTDDIETSFYASQEYFNNNGGNNTSFMKAIYETLLHREGTSADYAFWSNLV--NQHGRDWVVAQFWDSTETISERVSLMYEHYLGRTPDPNGLAGWVSIALQIGDSGLRAGLSGSDEYFGRSQ 448 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76277.17981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76277.17981.1 >prot_M-pyrifera_M_contig76277.17981.1 ID=prot_M-pyrifera_M_contig76277.17981.1|Name=mRNA_M-pyrifera_M_contig76277.17981.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp STELSQWYDHLQTGGSRSAMTSALSKTPEFAGSMVDEMYSTALGRTPDTAback to top mRNA from alignment at M-pyrifera_M_contig76277:2..568+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76277.17981.1 ID=mRNA_M-pyrifera_M_contig76277.17981.1|Name=mRNA_M-pyrifera_M_contig76277.17981.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=567bp|location=Sequence derived from alignment at M-pyrifera_M_contig76277:2..568+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76277:2..568+ >mRNA_M-pyrifera_M_contig76277.17981.1 ID=mRNA_M-pyrifera_M_contig76277.17981.1|Name=mRNA_M-pyrifera_M_contig76277.17981.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1134bp|location=Sequence derived from alignment at M-pyrifera_M_contig76277:2..568+ (Macrocystis pyrifera P11B4 male)back to top |