mRNA_M-pyrifera_M_contig7626.17979.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7626.17979.1
Unique NamemRNA_M-pyrifera_M_contig7626.17979.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A6H5KRA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRA4_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 3.490e-108
Identity = 178/241 (73.86%), Postives = 195/241 (80.91%), Query Frame = 3 
Query:   12 MKPGLALVLFHISTVFSVLTH--PPRVSTPSVLSMKLGRGGL-----FFSRRPSVLGIVGGIASGKSTVSRLLSD-CGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEK 710
            M+  LAL L H      +L    P R  TP   SM L  GGL     F  RRPSV+G++GGIASGKSTVS+ L   CG+AV+DADKLGHESYQPGTRCF KLV+ FG KI+A DGTIDRRALG+AVFGNP NMARLQ IVWPEIRLLAE +IEGLGREGAESVVLEAAVLLEAGWDDLCD+LWVVQVPP VARARLMKRNGFDE +ADKR+ASQPMTN+ERAARAT+VLSNEGTEE L  K
Sbjct:    1 MQTALALQLVHHLAAALILLALIPVRGYTPPAASMTLNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLAVIDADKLGHESYQPGTRCFGKLVDAFGEKIIAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPEVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 241
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: D8LJ61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ61_ECTSI)

HSP 1 Score: 315 bits (807), Expect = 3.420e-104
Identity = 165/207 (79.71%), Postives = 180/207 (86.96%), Query Frame = 3 
Query:  108 MKLGRGGL-----FFSRRPSVLGIVGGIASGKSTVSRLLSD-CGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEK 710
            M L  GGL     F  RRPSV+G++GGIASGKSTVS+ L   CG+ V+DADKLGHESYQPGTRCF KLV+ FG  IVA DGTIDRRALG+AVFGNP NMARLQ IVWPEIRLLAE +IEGLGREGAESVVLEAAVLLEAGWDDLCD+LWVVQVPP+VARARLMKRNGFDE +ADKR+ASQPMTN+ERAARAT+VLSNEGTEE L  K
Sbjct:    1 MTLNGGGLLASFSFTRRRPSVVGLIGGIASGKSTVSKALGTACGLEVIDADKLGHESYQPGTRCFGKLVDAFGENIVAGDGTIDRRALGQAVFGNPSNMARLQGIVWPEIRLLAEARIEGLGREGAESVVLEAAVLLEAGWDDLCDELWVVQVPPAVARARLMKRNGFDEAEADKRIASQPMTNQERAARATVVLSNEGTEEDLVAK 207
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A2A9HEN9_CHLB2 (Dephospho-CoA kinase n=3 Tax=Chloroflexi TaxID=200795 RepID=A0A2A9HEN9_CHLB2)

HSP 1 Score: 201 bits (510), Expect = 1.780e-59
Identity = 108/204 (52.94%), Postives = 139/204 (68.14%), Query Frame = 3 
Query:  153 VLGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWSS---RGRVAADR 755
            V+G+ GGIASGKSTV+    + G+ V+DAD LGH +Y PGT  ++K+V  FG  +VA DGTIDR+ LG  VFG P  + +L DIVWP IR LA E++      G E VVLEAAVLLEAGW+DL D++WVV V P +A  RL  RNG D + A  R+ASQ +TNEER AR  +++ N GT ++L  +++QAW S   R R AA R
Sbjct:    3 VIGLTGGIASGKSTVTSFFRERGIPVIDADILGHRTYDPGTETYQKVVETFGQDVVAADGTIDRKVLGSKVFGRPEELKKLTDIVWPGIRRLASEQLAEFEAAGNELVVLEAAVLLEAGWEDLVDEIWVVVVDPEIAVQRLAARNGLDPDAARARIASQ-LTNEERIARGDVIIENNGTLDELNARIQQAWDSLQERLRAAAGR 205
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A2W1AGZ2_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1AGZ2_9CHLR)

HSP 1 Score: 198 bits (503), Expect = 2.480e-58
Identity = 101/192 (52.60%), Postives = 135/192 (70.31%), Query Frame = 3 
Query:  156 LGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWSS 731
            +G+ GGIASGKSTV+  L+D G  ++DAD+LGH +Y+PGT  F ++V  FG+ IV  DGTIDR  LG  VFG P  M RL DIVWP I  LA E++      G E  V+EAAVL EAGW+ L D++WV+ VPP+VAR RLM RNGF  E+ADKR+ SQ ++N ER ARA +V+S + + +++  +V+ AW +
Sbjct:    4 IGLTGGIASGKSTVTGTLADLGATIIDADRLGHRTYEPGTETFAQVVAAFGADIVGEDGTIDRPTLGGKVFGEPGAMTRLTDIVWPGIAALAVEEMAAARAAGVEVAVVEAAVLFEAGWETLVDEVWVISVPPAVARQRLMDRNGFSAEEADKRIGSQ-LSNAEREARADVVISTDCSLDEVRSRVESAWQA 194
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A6B1A9Z4_9CHLR (Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6B1A9Z4_9CHLR)

HSP 1 Score: 196 bits (498), Expect = 8.640e-58
Identity = 101/191 (52.88%), Postives = 134/191 (70.16%), Query Frame = 3 
Query:  156 LGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWS 728
            +G+ GGIASGKSTV + L + G A +DAD LGH++Y+PGT  F+++V  FG  +VA DGTIDR  LG  VFG+P  M RL DIVWP IR LAE +++ L   G    VLEAAV++EAGW DL D++WVV V    AR RLM RN F  E+ADKR+ SQ +TN+ER   A +++SN+ + +  AE+V +AW+
Sbjct:    4 IGLTGGIASGKSTVVKQLQELGAATIDADLLGHQTYEPGTETFKQVVEAFGEDLVAEDGTIDRSKLGPRVFGHPDGMKRLTDIVWPGIRALAEAELDRLAANGTSVAVLEAAVMIEAGWQDLVDEVWVVAVSRDTARERLMARNNFSAEEADKRIDSQ-ITNDERLKHADVMISNDCSMDVAAERVARAWA 193
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A2E5LXA9_9CHLR (Dephospho-CoA kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E5LXA9_9CHLR)

HSP 1 Score: 196 bits (498), Expect = 2.590e-57
Identity = 104/198 (52.53%), Postives = 135/198 (68.18%), Query Frame = 3 
Query:  138 SRRPSVLGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWSS 731
            S R   +G+ GGIASGKSTV+    + GV V+DAD LGH +Y PGT  F  +V+ FGS IVA DG+IDRRALG  VFG P  + RL DIVWP IR LA +++  L   G +  +LEAAVLLEAGW D+ D++WV  V   +A ARL +RNG DE  A  R+ SQ ++NEER A A++V+ N GT E+LA+++K  W +
Sbjct:   24 SERVHTIGLTGGIASGKSTVAEFFREQGVPVIDADILGHRTYDPGTSTFADVVDAFGSDIVAADGSIDRRALGGKVFGKPEELTRLTDIVWPGIRALASQELSDLEVAGTKIALLEAAVLLEAGWQDMVDEVWVTTVEVDIAVARLAERNGLDETAARARIDSQ-LSNEERIAIASVVIENNGTREELADRIKAVWQA 220
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A6I4ZE45_9CHLR (Dephospho-CoA kinase n=4 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I4ZE45_9CHLR)

HSP 1 Score: 194 bits (493), Expect = 9.660e-57
Identity = 108/207 (52.17%), Postives = 135/207 (65.22%), Query Frame = 3 
Query:  138 SRRPSVLGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWSS-RGRVAADR 755
            S R   +G+ GGIASGKSTV+    + GV V+DAD LGH +Y+PGT  F  +V  FG  +VA DGTIDRR LG  VFG P  M RL DIVWP IR LA E++  L   G    VLEAAVLLEAGW+D+ D++WV  V    A ARL +RNG DE  A  R+ SQ ++NEER A A +V+ N GT E+LA+ ++ AW + R R   +R
Sbjct:   11 SERVHTIGLTGGIASGKSTVTEFFREQGVPVIDADILGHRTYEPGTGTFAAVVAAFGDDLVAEDGTIDRRVLGGKVFGKPEMMTRLTDIVWPGIRALASEELSQLEVAGTRIAVLEAAVLLEAGWEDMVDEIWVTTVEADGAVARLAERNGLDEAAARARIDSQ-LSNEERIAVADVVIENNGTREELADSIRGAWEALRARTGTER 216
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A7X3R448_9CHLR (Dephospho-CoA kinase n=3 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7X3R448_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 1.540e-56
Identity = 106/198 (53.54%), Postives = 133/198 (67.17%), Query Frame = 3 
Query:  138 SRRPSVLGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWSS 731
            S R   +G+ GGIASGKSTV+      GV V+DAD LGH +Y PGT  F  +V  FGS IVA+DGTIDRRALG  VFG P  M RL DIVWP IR LA +++  L   G    +LEAAVLLEAGW+D+ D++WV  V   +A ARL +RNG DE  A  R+ SQ ++NEER A A++V+ N GT E+LA  ++ AW +
Sbjct:    4 SERVHTIGLTGGIASGKSTVAEFFRGRGVPVIDADILGHRTYDPGTGTFAAVVAAFGSDIVADDGTIDRRALGGKVFGKPEMMTRLTDIVWPGIRALASQELSDLEVAGTGIALLEAAVLLEAGWEDMVDEIWVTTVEADIAVARLAERNGLDEAAARARIDSQ-LSNEERIAAASVVIENNGTLEELAGGIEAAWQA 200
[Close]
BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A315X443_9CHLR (Dephospho-CoA kinase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A315X443_9CHLR)

HSP 1 Score: 193 bits (491), Expect = 2.620e-56
Identity = 105/195 (53.85%), Postives = 131/195 (67.18%), Query Frame = 3 
Query:  144 RPSVLGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWS 728
            R  V+G+ GGIASGKSTV+R   D GV V+DAD LGH +Y PGT  FE +V  FG+++VA DGTIDR+ LG  VFG P  + RL DIVWP IR LA E +      G    VLEAAVL EAGWDDL D++WVV V P +A  RL  RNG + E A  R+ SQ +TN ER ARA +++ N GT  +L  ++++AWS
Sbjct:   25 RVHVIGLTGGIASGKSTVTRFFLDHGVPVIDADILGHRTYDPGTDTFEAVVRAFGAELVAPDGTIDRKVLGGKVFGRPDELKRLTDIVWPGIRRLATEALSEYETGGNAVAVLEAAVLFEAGWDDLADEIWVVVVEPDLAVERLGSRNGLEPEAARARINSQ-LTNAERTARADVIIENNGTLGELDARIQEAWS 218
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BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Match: A0A2E5DF81_9GAMM (Dephospho-CoA kinase n=3 Tax=root TaxID=1 RepID=A0A2E5DF81_9GAMM)

HSP 1 Score: 192 bits (488), Expect = 2.790e-56
Identity = 103/192 (53.65%), Postives = 133/192 (69.27%), Query Frame = 3 
Query:  153 VLGIVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGSKIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGREGAESV-VLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQADKRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAW 725
            V+G+ GGIASGKST ++LL + G  V+DAD LGHE+Y PGT  F+ +V  FG  IVA DG+I+RRALG  VFGN   + RL DIVWPEIR LAE +I  +  E   +V VLEAAVL EAGW+D+ D++WVV V P +A  R M+R+G D    + R+ SQ ++NEER A+A L++ N   EE L  +VK AW
Sbjct:    3 VIGLTGGIASGKSTAAKLLGELGAQVIDADVLGHEAYNPGTSAFQAVVQAFGEDIVAEDGSINRRALGGKVFGNDVALKRLTDIVWPEIRRLAELEIHKIRGENPTAVIVLEAAVLFEAGWEDIADEIWVVVVEPEIAIERAMQRDGADRSAIEARINSQ-LSNEERTAKAHLIIDNSEDEEALVSRVKAAW 193
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7626.17979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRA4_9PHAE3.490e-10873.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ61_ECTSI3.420e-10479.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2A9HEN9_CHLB21.780e-5952.94Dephospho-CoA kinase n=3 Tax=Chloroflexi TaxID=200... [more]
A0A2W1AGZ2_9CHLR2.480e-5852.60Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium... [more]
A0A6B1A9Z4_9CHLR8.640e-5852.88Dephospho-CoA kinase n=1 Tax=Chloroflexi bacterium... [more]
A0A2E5LXA9_9CHLR2.590e-5752.53Dephospho-CoA kinase n=1 Tax=Dehalococcoidia bacte... [more]
A0A6I4ZE45_9CHLR9.660e-5752.17Dephospho-CoA kinase n=4 Tax=Dehalococcoidia bacte... [more]
A0A7X3R448_9CHLR1.540e-5653.54Dephospho-CoA kinase n=3 Tax=Dehalococcoidia bacte... [more]
A0A315X443_9CHLR2.620e-5653.85Dephospho-CoA kinase n=1 Tax=Dehalococcoidia bacte... [more]
A0A2E5DF81_9GAMM2.790e-5653.65Dephospho-CoA kinase n=3 Tax=root TaxID=1 RepID=A0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7626contigM-pyrifera_M_contig7626:3493..7220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score317.8
Seed ortholog evalue5.2e-84
Seed eggNOG ortholog2880.D8LJ61
Preferred nameCOASY
KEGG rclassRC00002,RC00078
KEGG koko:K00859,ko:K02318
KEGG ReactionR00130,R03035
KEGG Pathwayko00770,ko01100,map00770,map01100
KEGG ModuleM00120
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004140,GO:0004595,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005759,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007300,GO:0007303,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010631,GO:0015936,GO:0015937,GO:0016020,GO:0016301,GO:0016310,GO:0016477,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019867,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030707,GO:0030855,GO:0031090,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070013,GO:0070328,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090130,GO:0090132,GO:0090407,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dephospho-CoA kinase activity
EggNOG OGsCOG0237@1,KOG3220@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-02_004890.1
EC2.7.1.24,2.7.7.3
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons4
Model size1174
Cds size843
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7626.17979.1prot_M-pyrifera_M_contig7626.17979.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7626 3813..7209 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816661.7195907-UTR-M-pyrifera_M_contig7626:3492..38121622816661.7195907-UTR-M-pyrifera_M_contig7626:3492..3812Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7626 3493..3812 -
1692278104.870174-UTR-M-pyrifera_M_contig7626:3492..38121692278104.870174-UTR-M-pyrifera_M_contig7626:3492..3812Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7626 3493..3812 -
1622816661.7812312-UTR-M-pyrifera_M_contig7626:7209..72201622816661.7812312-UTR-M-pyrifera_M_contig7626:7209..7220Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7626 7210..7220 -
1692278104.9156127-UTR-M-pyrifera_M_contig7626:7209..72201692278104.9156127-UTR-M-pyrifera_M_contig7626:7209..7220Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7626 7210..7220 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816661.7340248-CDS-M-pyrifera_M_contig7626:3812..39561622816661.7340248-CDS-M-pyrifera_M_contig7626:3812..3956Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 3813..3956 -
1692278104.8821247-CDS-M-pyrifera_M_contig7626:3812..39561692278104.8821247-CDS-M-pyrifera_M_contig7626:3812..3956Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 3813..3956 -
1622816661.7470279-CDS-M-pyrifera_M_contig7626:4843..49881622816661.7470279-CDS-M-pyrifera_M_contig7626:4843..4988Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 4844..4988 -
1692278104.890923-CDS-M-pyrifera_M_contig7626:4843..49881692278104.890923-CDS-M-pyrifera_M_contig7626:4843..4988Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 4844..4988 -
1622816661.7589147-CDS-M-pyrifera_M_contig7626:5987..61901622816661.7589147-CDS-M-pyrifera_M_contig7626:5987..6190Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 5988..6190 -
1692278104.89913-CDS-M-pyrifera_M_contig7626:5987..61901692278104.89913-CDS-M-pyrifera_M_contig7626:5987..6190Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 5988..6190 -
1622816661.7697275-CDS-M-pyrifera_M_contig7626:6858..72091622816661.7697275-CDS-M-pyrifera_M_contig7626:6858..7209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 6859..7209 -
1692278104.9071283-CDS-M-pyrifera_M_contig7626:6858..72091692278104.9071283-CDS-M-pyrifera_M_contig7626:6858..7209Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7626 6859..7209 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7626.17979.1

>prot_M-pyrifera_M_contig7626.17979.1 ID=prot_M-pyrifera_M_contig7626.17979.1|Name=mRNA_M-pyrifera_M_contig7626.17979.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=281bp
MKPGLALVLFHISTVFSVLTHPPRVSTPSVLSMKLGRGGLFFSRRPSVLG
IVGGIASGKSTVSRLLSDCGVAVLDADKLGHESYQPGTRCFEKLVNEFGS
KIVANDGTIDRRALGEAVFGNPFNMARLQDIVWPEIRLLAEEKIEGLGRE
GAESVVLEAAVLLEAGWDDLCDDLWVVQVPPSVARARLMKRNGFDEEQAD
KRVASQPMTNEERAARATLVLSNEGTEEQLAEKVKQAWSSRGRVAADRRR
SRLMLSVAAVAAAAAIAAASVALKRGRVLR*
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mRNA from alignment at M-pyrifera_M_contig7626:3493..7220-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7626.17979.1 ID=mRNA_M-pyrifera_M_contig7626.17979.1|Name=mRNA_M-pyrifera_M_contig7626.17979.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3728bp|location=Sequence derived from alignment at M-pyrifera_M_contig7626:3493..7220- (Macrocystis pyrifera P11B4 male)
GTTCCCACCCGATGAAGCCCGGACTTGCTCTAGTGCTGTTCCACATCTCG
ACCGTTTTCTCCGTTCTCACGCATCCACCCAGAGTGTCGACGCCGTCTGT
ACTGAGCATGAAGCTCGGAAGAGGCGGTCTGTTCTTTAGTCGCCGCCCTT
CTGTCCTTGGGATTGTAGGGGGGATCGCCTCAGGCAAGAGCACTGTTTCG
AGGCTGCTGAGCGACTGCGGGGTAGCGGTCCTCGACGCCGACAAGCTTGG
CCACGAGAGCTACCAGCCAGGGACGCGTTGCTTCGAAAAGCTGGTGAACG
AGTTCGGCTCGAAAATTGTGGCCAATGATGGAACCATCGACCGCCGTGCG
CTTGGAGAGGCGGTGCGTTGAGTTATCTGGCGTACGTAGACTTCCTCGCC
CGAAAATGTAACGTTTATGTTGCCTCCAGAGAATGACTGCGCGATTCGAA
ATGCGATCCGCCAAAAAAAAAAGCGATCGTGGCACAAGCCACACACAAGC
CAGAGCTGATGCGGCGGTAGTACACGGTGCGCGGTAGACACTGCTGCGTT
GTCGGTTCCGTACCTCGTCCTGTTGTCCGGCGTCGGCCCTCTTTCTTTCT
TATTTGCGGCGTTTTTTACTCTGCTTGCACGAACCGTGTAACGAGTCTGT
ACGTAAGTGTAGAATAGAAAAAAAAGGGCAACATCTCGGTTGCAGATAGA
AGCCACGCTGCTTGTGTTAATAGTCTATTATTAATAATAGTTTCAAGCTT
TTGCGCGGATATCAGCGCCGAGGCTTGCCCACGAGCAAGCGTCGGACGCG
CTTGACCGACAAGCAGCCTGCAGCTTCAGCGAAAAAAGGGCAGGGGTTAC
GAGTTTCATCGCGCGAACGCGCAACGAAGCGCGTCTCGTCTCGCCGCCGC
TGCGGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCAACGAAAC
GTTTTCGCCGGACATGCATGCCACGAAACGCCAACCACAACCTCAACCAA
CCCCAACCCTCGATCCTTCTGGCCCAACAGGTTTTTGGAAACCCTTTCAA
CATGGCCAGGCTGCAGGATATAGTTTGGCCGGAGATACGGCTGTTGGCGG
AGGAGAAGATCGAGGGGCTGGGACGAGAGGGCGCAGAATCCGTGGTGCTC
GAGGCGGCAGTGCTGCTCGAAGCCGGGTGGGATGATTTGTGTGACGACCT
GTGGGTGGTGCAAGTACCCCCGTCGGTGGCGCGGTAAGTCTCTTCTCCTG
TCTCGGCTTCGTTTTCTTCGCTCTGTTTTCTTCTTTAGTTTGTTCGCGCC
GCGCGAGCAACGCGGGTTTATGGAGTCTTCTTGTGTTATTGTGTCTTTGG
CTCGTGTGTTCTCGTGTTCAACACGTGTTATCTTGTTTTTGTGTTGGAAA
TTTGCAAAAAAAAATAGTTTCGTTTACTAATAGCTCTCCTCGCTAAGAGA
TAATCTGGTAAGCGCCTACGAACCATTTGTATGACCGTGTGCAACTCTCA
TCTGCGAGCGAGGTGCGTCGCGTATCACAATAGTTCAGTTTCCCTCTCGC
GTTGGTGTTCATTCGGGCGTTTCTTTGCACCACACAAGCAAGCAAAGCTT
CCCTGGAGTCGTGTCCTCTTGTGTCCTTGTGTTCTTGCGCTGCACGTTTG
CAAGCACCGGTTTCGTCTTGCGGCGGTATCTCCTCCCTGAAAGGTATCCC
CGAAATGCGATCCATTTGCGTTGTTGCCGTGAGCCCGTGTGCACGTGCGC
GACTCTCGTCTATGAGACGGGCCGTAGCGTAGCGTGGAACGGGGAACCTG
GATTTTTTTTTTTTTTGCGTACCTGTTGGCTTGTGAAGCTTCATTTGAGT
AGCGTCGCTTGAAAACGTTTGTTCGTGTAAGCGTAGCTTGTGCAAAGGTA
AAATTTTACCCTTTTGACAGAAAGCTGACGGGGGAATGCCATCTCGCAAC
AACGCATTTATCGTTTGAAACAATAGCTAAAGTGCCCTCGGCTGATTTTG
CCCACGATCGTCGGTGTCGCCCTCTCGCCGAGGGGTCCGCTTTGGATGTA
TCTGGTACTACATTACATTTCAAGGCGTCGTCCGAGCGCGTATTGAGCGC
TCATTATATCCGAGACAGGCAGTGAAGGCAATGTGTTCGATGCGCTCGCC
GCCGCGCGGTGTACGTGCGCGTGGCTTGGTCGGCGAGCTCACTGCTGTGC
TGCTTAACTGCTGCTGTGCTCCTGCTGTGCAGGGCGCGGCTGATGAAACG
GAACGGCTTCGACGAGGAACAGGCCGATAAAAGGGTCGCCTCGCAGCCCA
TGACCAACGAAGAGCGAGCGGCCCGAGCGACGCTTGTGCTCTCCAACGAA
GGGACGGAGGAGCAATTGGCGGAGAAGGTGTGGAATTGTTTTCGTAATGA
TTATGGGACGGGCGCCCCGGGCAGGTTTTTTTCTTGTGTGGTTGTGGTGT
GGGGTGCACACGGAGGTGGCTCGGCGTATATCTCGTGTCGACACGGAACG
GAGTGATGGACCTTAGGTGTGACGTTGAACTTGTGCGTAATGAAGCGGTA
CCATTAAGGGGAAGGGGACCTGGTACCCACATCACCCCCCTCCTATTTTT
AGACGTACGATTTGAGCACCGAGGTGTGTCGGTACCTCGAGTCTATACGG
AACGGAGTGACAGACCTTGCAGTGTGAATTTGAACTTCTGTATAACGAGG
AGGTACTAGTAGGGGAAGAGACTCTATTCGTATGACAACATTATTTCACA
TACCTGGTACGACATACCTGGTATACGTCAGCTGTGAATTCGCCAGAGTT
GATCGATGCTCAGCTCTGCAAGCTGTATGCTATCATACGTCCGTCGCGTG
TGAGCGCTGCATTCCTTGAAAAGGATATAGACCGAGGATCCTCCTGGACT
TCGTATTATAGTCAGCAAGGAGTGAAGAGTCTGTATTGTGATTTACGGCA
TGCTCCGTGGTGTTCCTCGTGCTGTTCAAGAGTTTTAGATGCCCGGATTG
TTGAAGAGCTACCGTAGTATTTATAGTACGCAGATGGCCGGGGATGGTTG
CAGTGGCGTAGGCGACCGCAGCTGAGGAGTCCAAACAGTATGTTGCTGGT
TACACAGTGTCCACCCTCACAGCTCAAGCGACCTTCTCTAGCAGCCCAGC
CTGTCTCTTTTTACCTGCGGCATGATATCACCAACCAATCACCTCTCTTC
GCACCTCTGGCGTCGGCTGCGTCTCTTGTTCCGCCGCCTTTTATTTGGTC
GTCTCGGAACACAGGTGAAGCAGGCCTGGTCTTCCAGGGGCAGGGTAGCC
GCTGATCGGCGACGATCCCGGCTTATGTTGAGCGTTGCGGCCGTCGCGGC
AGCGGCGGCAATCGCGGCCGCTTCTGTAGCGTTGAAACGCGGCCGAGTGT
TGCGATGAGACAAGAAGACCTAAGAAAAACGCTCGCTTTTACCAGTACAG
TCAGTAGTGGTGGGCGATGGATTGCACAATGTGGCAGATGTCGGTTTCTT
TAGCAGGTACTGGTATTTCGTGAATGTTGTCGCCACGAGACTATGGAAGC
GCCAAGAGGAAACACGAAGCTTTGGAACGGGTAAATAGCTTTGAGGACGA
CTCGTCATCAGAAACACCAGATATTTGTTTCCCCTGGCATAAAGGGAGAA
AACGGCATTTTGCAGCCAGTGCCATCGCGTTCTCTTGTTTTAGTGACGAG
TGAATGCAAATGTCTAATTTTGACCACG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7626:3493..7220-

>mRNA_M-pyrifera_M_contig7626.17979.1 ID=mRNA_M-pyrifera_M_contig7626.17979.1|Name=mRNA_M-pyrifera_M_contig7626.17979.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1686bp|location=Sequence derived from alignment at M-pyrifera_M_contig7626:3493..7220- (Macrocystis pyrifera P11B4 male)
ATGAAGCCCGGACTTGCTCTAGTGCTGTTCCACATCTCGACCGTTTTCTC
CGTTCTCACGCATCCACCCAGAGTGTCGACGCCGTCTGTACTGAGCATGA
AGCTCGGAAGAGGCGGTCTGTTCTTTAGTCGCCGCCCTTCTGTCCTTGGG
ATTGTAGGGGGGATCGCCTCAGGCAAGAGCACTGTTTCGAGGCTGCTGAG
CGACTGCGGGGTAGCGGTCCTCGACGCCGACAAGCTTGGCCACGAGAGCT
ACCAGCCAGGGACGCGTTGCTTCGAAAAGCTGGTGAACGAGTTCGGCTCG
AAAATTGTGGCCAATGATGGAACCATCGACCGCCGTGCGCTTGGAGAGGC
GATGAAGCCCGGACTTGCTCTAGTGCTGTTCCACATCTCGACCGTTTTCT
CCGTTCTCACGCATCCACCCAGAGTGTCGACGCCGTCTGTACTGAGCATG
AAGCTCGGAAGAGGCGGTCTGTTCTTTAGTCGCCGCCCTTCTGTCCTTGG
GATTGTAGGGGGGATCGCCTCAGGCAAGAGCACTGTTTCGAGGCTGCTGA
GCGACTGCGGGGTAGCGGTCCTCGACGCCGACAAGCTTGGCCACGAGAGC
TACCAGCCAGGGACGCGTTGCTTCGAAAAGCTGGTGAACGAGTTCGGCTC
GAAAATTGTGGCCAATGATGGAACCATCGACCGCCGTGCGCTTGGAGAGG
CGGTTTTTGGAAACCCTTTCAACATGGCCAGGCTGCAGGATATAGTTTGG
CCGGAGATACGGCTGTTGGCGGAGGAGAAGATCGAGGGGCTGGGACGAGA
GGGCGCAGAATCCGTGGTGCTCGAGGCGGCAGTGCTGCTCGAAGCCGGGT
GGGATGATTTGTGTGACGACCTGTGGGTGGTGCAAGTACCCCCGTCGGTG
GCGCGGTTTTTGGAAACCCTTTCAACATGGCCAGGCTGCAGGATATAGTT
TGGCCGGAGATACGGCTGTTGGCGGAGGAGAAGATCGAGGGGCTGGGACG
AGAGGGCGCAGAATCCGTGGTGCTCGAGGCGGCAGTGCTGCTCGAAGCCG
GGTGGGATGATTTGTGTGACGACCTGTGGGTGGTGCAAGTACCCCCGTCG
GTGGCGCGGGCGCGGCTGATGAAACGGAACGGCTTCGACGAGGAACAGGC
CGATAAAAGGGTCGCCTCGCAGCCCATGACCAACGAAGAGCGAGCGGCCC
GAGCGACGCTTGTGCTCTCCAACGAAGGGACGGAGGAGCAATTGGCGGAG
AAGGGCGCGGCTGATGAAACGGAACGGCTTCGACGAGGAACAGGCCGATA
AAAGGGTCGCCTCGCAGCCCATGACCAACGAAGAGCGAGCGGCCCGAGCG
ACGCTTGTGCTCTCCAACGAAGGGACGGAGGAGCAATTGGCGGAGAAGGT
GAAGCAGGCCTGGTCTTCCAGGGGCAGGGTAGCCGCTGATCGGCGACGAT
CCCGGCTTATGTTGAGCGTTGCGGCCGTCGCGGCAGCGGCGGCAATCGCG
GCCGCTTCTGTAGCGTTGAAACGCGGCCGAGTGTTGCGATGAGTGAAGCA
GGCCTGGTCTTCCAGGGGCAGGGTAGCCGCTGATCGGCGACGATCCCGGC
TTATGTTGAGCGTTGCGGCCGTCGCGGCAGCGGCGGCAATCGCGGCCGCT
TCTGTAGCGTTGAAACGCGGCCGAGTGTTGCGATGA
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