mRNA_M-pyrifera_M_contig76147.17962.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig76147.17962.1
Unique NamemRNA_M-pyrifera_M_contig76147.17962.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A7X5WQC9_9ACTN (Molydop_binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WQC9_9ACTN)

HSP 1 Score: 391 bits (1005), Expect = 2.740e-135
Identity = 196/262 (74.81%), Postives = 217/262 (82.82%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVPA 786
            LIA+G GPDADP  +HDQ++  LLQ E+D P SPVAGRDLD+L+AMVDGDTGA+RVLD +LRTGPRGD FG  P GLSLA L E PHGID+G LEPRLP LLRT + RIDL+AGPFA +L RLA  + + A D RLRLVGRRHLRSNNSWMHN+ VLVKGKPRCTLQ+HPD+A  LG+ DG AA V SRVGEV+APVEVTD VMPGVVSLPHGWGH  PG R+ VA EHAGVNSNVLTDP  IDPLSG AVLNGIPVEV PA
Sbjct:   17 LIALGFGPDADPALMHDQMITRLLQTEVDDPASPVAGRDLDQLVAMVDGDTGADRVLDALLRTGPRGDGFGADPDGLSLARLREHPHGIDYGPLEPRLPGLLRTADLRIDLWAGPFADELTRLADSLEDRAGDGRLRLVGRRHLRSNNSWMHNVEVLVKGKPRCTLQVHPDDAADLGVVDGGAARVTSRVGEVVAPVEVTDAVMPGVVSLPHGWGHDLPGIRLDVAREHAGVNSNVLTDPEAIDPLSGTAVLNGIPVEVAPA 278          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A2E0T2T3_9ACTN (Molybdopterin-binding oxidoreductase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T2T3_9ACTN)

HSP 1 Score: 365 bits (938), Expect = 5.620e-121
Identity = 181/262 (69.08%), Postives = 212/262 (80.92%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVPA 786
            L+AMG+  + D   +HDQ+V  LL AE+  P SPV GR++++L+AMVDGDTG++R+LD MLRTGP GDAFG  P GLSL  L + PHGID GALEPRLP  L+TPE+RIDLFAGPF  +L RL +R+VEWA D RLRL+GRRHLRSNNSWMHN+ VLVKGK RCTLQ++PD+A  LG+ DG  A VRSRVGEV A VEVTD VMPGVVSLPHGWGHG+PG ++ VA  HAGVNSNVLTDP  IDP+SG +VLNGIPVEV PA
Sbjct:  312 LLAMGM--EGDATLVHDQLVNQLLSAEVGAPGSPVEGRNVEDLIAMVDGDTGSDRMLDAMLRTGPHGDAFGANPDGLSLQKLRDNPHGIDLGALEPRLPDALQTPEKRIDLFAGPFLEELARLEVRVVEWAGDGRLRLIGRRHLRSNNSWMHNVEVLVKGKARCTLQINPDDAAELGVVDGGKASVRSRVGEVTADVEVTDIVMPGVVSLPHGWGHGQPGAQLEVAARHAGVNSNVLTDPLAIDPVSGTSVLNGIPVEVAPA 571          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A2E8L8I6_9ACTN (Molybdopterin-binding oxidoreductase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L8I6_9ACTN)

HSP 1 Score: 364 bits (934), Expect = 3.000e-118
Identity = 181/262 (69.08%), Postives = 210/262 (80.15%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVPA 786
            L+AMG+  + D   +HDQ+V  LL AE+  P SPV GR++++L+AMVDGDTG++R+LD MLRTGP GDAFG  P GLSL  L + PHGID GALEPRLP  L+TPE+RIDLFAGP   +L RL  R+VEWA D RLRL+GRRHLRSNNSWMHN+ VLVKGK RCTLQ++PD+A  LG+ DG  A VRSRVGEV A VEVTD VMPGVVSLPHGWGHG+PG R+ VA  HAGVNSNVLTDP  IDP+SG +VLNGIPVEV PA
Sbjct:  491 LLAMGM--EGDATLVHDQLVNQLLSAEVGVPGSPVEGRNVEDLIAMVDGDTGSDRMLDAMLRTGPHGDAFGANPDGLSLQKLRDNPHGIDLGALEPRLPDALQTPEKRIDLFAGPLLEELTRLEARVVEWAGDGRLRLIGRRHLRSNNSWMHNIEVLVKGKARCTLQINPDDAAELGVVDGGKASVRSRVGEVTADVEVTDIVMPGVVSLPHGWGHGQPGARLDVAARHAGVNSNVLTDPLAIDPVSGTSVLNGIPVEVAPA 750          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A3M2H8D8_ACTSX (Molybdopterin oxidoreductase family protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2H8D8_ACTSX)

HSP 1 Score: 337 bits (864), Expect = 1.220e-107
Identity = 171/261 (65.52%), Postives = 202/261 (77.39%), Query Frame = 1
Query:    4 IAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVPA 786
            IA GLGPDADP  +HDQ++  L++AE+    SP+AGRD DE+LA VDGDT A+RVLD ++RTGP GD FG RP GLSLA+L+  PHG+D G LEPRLP  LRTP   I++ A PF  +L RLA R+    +   L L+GRR LRSNNSWMHNL VLV+G  RCTLQ++P +A+ LGL DG  A VRSRVG V APVE+TD V PGVVSLPHGWGH +PGTR+ VA  HAGVNSN LTDP+++DPLSGNAVLNGIPVEVVPA
Sbjct:  495 IAAGLGPDADPALVHDQILRSLVEAEVANEHSPIAGRDPDEILAAVDGDTPADRVLDVLVRTGPYGDGFGARPDGLSLAVLAAHPHGVDLGPLEPRLPGRLRTPSGVIEVLADPFVTELARLAQRLDH--EPPPLVLIGRRQLRSNNSWMHNLEVLVRGSNRCTLQVNPADAERLGLVDGGDAEVRSRVGAVRAPVEITDDVPPGVVSLPHGWGHDRPGTRLGVARAHAGVNSNRLTDPAIVDPLSGNAVLNGIPVEVVPA 753          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: UPI001AA045AF (molybdopterin oxidoreductase family protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA045AF)

HSP 1 Score: 320 bits (820), Expect = 4.270e-101
Identity = 165/270 (61.11%), Postives = 195/270 (72.22%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWA---------DDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVP 783
            LIA G G  ADP  +   +V G+LQ  I   +SP+AG  ++EL +++DG +  +RVLD M+RTGP GD FG  PGGLSLA L+   HG+D G L+PRLP LLRTP   I+L   P AAD+ RL     E A         D + L L+GRRHLRSNNSWMHN+  LVKGKPRCTLQ+HPD+A  LGL DGD A VRSRVG V+APVE+TD + PGVVSLPHGWGHG PG+R++VA EHAGVNSNVLTD  V+DPLSGNAVLNGIPV V P
Sbjct:  486 LIASGQGTGADPALVEHLLVDGILQGAIGAADSPIAGCTVEELASLLDGPSAVDRVLDAMIRTGPYGDWFGAVPGGLSLASLAVHEHGLDLGPLQPRLPELLRTPSGTIELVPDPIAADIPRLLASCREAAIGAGGSEGVDGSGLVLIGRRHLRSNNSWMHNVAPLVKGKPRCTLQIHPDDAARLGLGDGDPAEVRSRVGAVVAPVEITDAIRPGVVSLPHGWGHGVPGSRLSVAAEHAGVNSNVLTDGEVVDPLSGNAVLNGIPVTVTP 755          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: UPI00034D7459 (molybdopterin-dependent oxidoreductase n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00034D7459)

HSP 1 Score: 302 bits (774), Expect = 2.280e-94
Identity = 161/264 (60.98%), Postives = 188/264 (71.21%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVD--GDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVPA 786
            LIA G+G DADP  + D  + GL+ + +    S V GRD DEL + +D  G  G +R++D MLRTGP GD FG  P G SL  L E PHG DFGAL PRLP +LRTP   ++L    F  DL RLA  + E  DD  L LVGRRHLRSNNSWMHN+ VLVKG PRCTLQ+HPD+A ALGL  G AA V SRVG V+APVEVTD++ PGVVSLPHGWGH  PG RM +A EHAGVNSNVL+D   +DPLSG +VLNGIPV++ PA
Sbjct:  496 LIAQGMGADADPALVDDLAIDGLIGSAVKDENSNVYGRDADELRSALDASGRRGPDRMVDFMLRTGPFGDGFGADPDGTSLDDLLENPHGRDFGALVPRLPEILRTPSGVVELAPDVFLDDLDRLAAAIPE-LDDRSLVLVGRRHLRSNNSWMHNINVLVKGAPRCTLQVHPDDAVALGLAHGGAARVTSRVGHVVAPVEVTDSIRPGVVSLPHGWGHDLPGARMRIAAEHAGVNSNVLSDDRSMDPLSGTSVLNGIPVDLEPA 758          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A7X9Q070_9ACTN (Molybdopterin-dependent oxidoreductase n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9Q070_9ACTN)

HSP 1 Score: 297 bits (760), Expect = 2.340e-94
Identity = 155/260 (59.62%), Postives = 187/260 (71.92%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVV 780
            LIA GLG DA+P    +  +  ++Q+ ++ P SP+ GRD DE+++ +  + G  R+LD ML+TGP G AFG  P G S+ALL   PHG+DFGAL+ RLP +LRTP   I+L      ADL RL   M + A    L LVGRRHLRSNNSWMHN+ VLVKGKPRCTL +HPD+A  LGL DG  A V SRVG V A VEVTD++ PGVVSLPHGWGHG+PGTRM VA E AGVNSN+L D + IDPLSG +VLNGIPVE+V
Sbjct:  294 LIAAGLGADAEPALADEVGMRSMVQSSVNDPSSPIHGRDADEIVSALGDEPGPARMLDFMLQTGPFGAAFGANPDGASVALLRANPHGVDFGALQARLPEILRTPSGTIELNHPILMADLVRLHAAM-DAAAHQPLVLVGRRHLRSNNSWMHNIEVLVKGKPRCTLHVHPDDAARLGLSDGGVARVTSRVGTVDAAVEVTDSIRPGVVSLPHGWGHGQPGTRMRVAAERAGVNSNILADHTAIDPLSGTSVLNGIPVEIV 552          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A662E6R4_9ACTN (4Fe-4S Mo/W bis-MGD-type domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A662E6R4_9ACTN)

HSP 1 Score: 301 bits (771), Expect = 7.830e-94
Identity = 160/264 (60.61%), Postives = 188/264 (71.21%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVD--GDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVPA 786
            LIA GLG DA      D  + GL+ + +    SPVAGRD DEL+  +   G  G ER+LD MLR+GP GD FG    G SL  L +RPHG DFGAL PR+P +LRT   +I++   PF  DL+RL   M E AD   L LVGRRHLRSNNSWMHN+ VLVKGKPRCTLQ+HP++A  LGL DG AA ++SRVG V+APVEVT ++  GVVSLPHGWGHG PGT++ VA EHAGVNSNVL+D   +DPLSG AVLNGIPVEV  A
Sbjct:  505 LIAQGLGVDAPASVADDMAIAGLVHSAVGDEHSPVAGRDPDELITELSASGRRGPERMLDFMLRSGPFGDGFGTSDDGTSLDDLIDRPHGRDFGALVPRIPEVLRTSSGKIEMAPEPFINDLRRLQDAMPELADRG-LVLVGRRHLRSNNSWMHNIKVLVKGKPRCTLQVHPEDAVTLGLADGAAASIKSRVGAVVAPVEVTASIRKGVVSLPHGWGHGMPGTKLGVAAEHAGVNSNVLSDHEALDPLSGTAVLNGIPVEVAAA 767          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A6I3WQI8_9ACTN (Molybdopterin-dependent oxidoreductase n=2 Tax=root TaxID=1 RepID=A0A6I3WQI8_9ACTN)

HSP 1 Score: 300 bits (769), Expect = 1.650e-93
Identity = 156/262 (59.54%), Postives = 185/262 (70.61%), Query Frame = 1
Query:    4 IAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMV--DGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVP 783
            +  G GPDADP  + +  + GL++  +    SP+ GRD DE+L  +   G  G ER+LD MLRTGP GD FG+ P  +SL  L + PHG+DFGALEPRLP +LRTP  RI+L A    AD++RLA+ M   A+   L LVGRRHLRSNNSWMHN+ VLVKGKPRCTL +HPD+A  LGL  G  A + SRVG V APVEVTD + PGVVSLPHGWGHG  G R+ VA E AGVNSNVL+D   IDPLSG +VLNGIPV V P
Sbjct:  504 VLQGQGPDADPAIVDELAISGLVRHAVSDRNSPIYGRDADEILTALAATGHRGPERMLDFMLRTGPYGDQFGVNPQAVSLQTLIDHPHGVDFGALEPRLPEILRTPSGRIELAAPVLVADVERLAVAMQTLAEQP-LVLVGRRHLRSNNSWMHNIEVLVKGKPRCTLHVHPDDAAELGLVHGGYARITSRVGSVEAPVEVTDDIRPGVVSLPHGWGHGVEGARLRVAAERAGVNSNVLSDHQAIDPLSGTSVLNGIPVSVEP 764          
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Match: A0A524B0E1_9ACTN (Molybdopterin-binding oxidoreductase n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B0E1_9ACTN)

HSP 1 Score: 299 bits (765), Expect = 4.780e-93
Identity = 155/261 (59.39%), Postives = 182/261 (69.73%), Query Frame = 1
Query:    1 LIAMGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGAERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLRTPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHNLTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTVMPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLNGIPVEVVP 783
            LIA GLGPDADP    D  +  L+++ I  P SP+ GRD DE+   +D   G  R LD ML+TGP G AFG  PGG+S+  L   PHG+D+G L+ RLP  LRT   RI+L      AD+ R+   + E+A    L LVGRRHLRSNNSWMHN+ VLVKGKPRCTL +HPD+A  LG+ DG  A + SRVG V A VEVTD + PGVVSLPHGWGHG+PGTR+ VA E AGVNSNVLTD   IDPLSG +VLNGIPV VVP
Sbjct:  497 LIAQGLGPDADPSVADDAQIDALVRSAISDPTSPIHGRDADEIRTQLDRHRGPTRQLDFMLQTGPYGAAFGSNPGGVSIDHLRANPHGVDYGPLQSRLPDALRTKSGRIELAPSELLADVARMHANLDEFARRD-LVLVGRRHLRSNNSWMHNIEVLVKGKPRCTLHVHPDDASRLGVRDGSVARITSRVGSVDAVVEVTDGIRPGVVSLPHGWGHGQPGTRLRVAAERAGVNSNVLTDHQAIDPLSGTSVLNGIPVTVVP 756          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76147.17962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X5WQC9_9ACTN2.740e-13574.81Molydop_binding domain-containing protein n=1 Tax=... [more]
A0A2E0T2T3_9ACTN5.620e-12169.08Molybdopterin-binding oxidoreductase (Fragment) n=... [more]
A0A2E8L8I6_9ACTN3.000e-11869.08Molybdopterin-binding oxidoreductase n=7 Tax=Acidi... [more]
A0A3M2H8D8_ACTSX1.220e-10765.52Molybdopterin oxidoreductase family protein n=1 Ta... [more]
UPI001AA045AF4.270e-10161.11molybdopterin oxidoreductase family protein n=1 Ta... [more]
UPI00034D74592.280e-9460.98molybdopterin-dependent oxidoreductase n=1 Tax=Ilu... [more]
A0A7X9Q070_9ACTN2.340e-9459.62Molybdopterin-dependent oxidoreductase n=2 Tax=Act... [more]
A0A662E6R4_9ACTN7.830e-9460.614Fe-4S Mo/W bis-MGD-type domain-containing protein... [more]
A0A6I3WQI8_9ACTN1.650e-9359.54Molybdopterin-dependent oxidoreductase n=2 Tax=roo... [more]
A0A524B0E1_9ACTN4.780e-9359.39Molybdopterin-binding oxidoreductase n=1 Tax=Acidi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig76147contigM-pyrifera_M_contig76147:2..790 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score291.6
Seed ortholog evalue3.7e-76
Seed eggNOG ortholog35754.JNYJ01000014_gene4769
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Molybdopterin oxidoreductase Fe4S4 domain
EggNOG OGs2GNYQ@201174,4DI2D@85008,COG0243@1,COG0243@2
COG Functional cat.C
Best tax levelMicromonosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size789
Cds size780
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816660.9187262-UTR-M-pyrifera_M_contig76147:1..101622816660.9187262-UTR-M-pyrifera_M_contig76147:1..10Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76147 2..10 +
1692278104.4553585-UTR-M-pyrifera_M_contig76147:1..101692278104.4553585-UTR-M-pyrifera_M_contig76147:1..10Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig76147 2..10 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816660.9319296-CDS-M-pyrifera_M_contig76147:10..7901622816660.9319296-CDS-M-pyrifera_M_contig76147:10..790Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76147 11..790 +
1692278104.4677725-CDS-M-pyrifera_M_contig76147:10..7901692278104.4677725-CDS-M-pyrifera_M_contig76147:10..790Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig76147 11..790 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig76147.17962.1prot_M-pyrifera_M_contig76147.17962.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig76147 11..790 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig76147.17962.1

>prot_M-pyrifera_M_contig76147.17962.1 ID=prot_M-pyrifera_M_contig76147.17962.1|Name=mRNA_M-pyrifera_M_contig76147.17962.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
MGLGPDADPKCLHDQVVVGLLQAEIDTPESPVAGRDLDELLAMVDGDTGA
ERVLDCMLRTGPRGDAFGIRPGGLSLALLSERPHGIDFGALEPRLPTLLR
TPEQRIDLFAGPFAADLQRLALRMVEWADDARLRLVGRRHLRSNNSWMHN
LTVLVKGKPRCTLQLHPDNADALGLHDGDAAIVRSRVGEVIAPVEVTDTV
MPGVVSLPHGWGHGKPGTRMAVAGEHAGVNSNVLTDPSVIDPLSGNAVLN
GIPVEVVPA*
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mRNA from alignment at M-pyrifera_M_contig76147:2..790+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig76147.17962.1 ID=mRNA_M-pyrifera_M_contig76147.17962.1|Name=mRNA_M-pyrifera_M_contig76147.17962.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig76147:2..790+ (Macrocystis pyrifera P11B4 male)
CTCATCGCCATGGGTCTGGGTCCCGACGCCGACCCGAAGTGTCTGCACGA CCAGGTGGTCGTCGGCCTCCTGCAAGCGGAGATCGACACGCCCGAGTCGC CGGTGGCGGGTCGCGATCTCGATGAGTTGCTCGCCATGGTCGACGGCGAC ACCGGCGCCGAACGGGTTCTCGATTGCATGCTGCGCACCGGGCCGCGCGG CGATGCGTTCGGCATCCGTCCCGGCGGGCTCTCGCTGGCCCTGCTCAGCG AACGTCCCCACGGCATCGACTTCGGTGCCCTCGAACCTCGGCTGCCCACC CTGCTGCGCACGCCCGAACAGCGAATCGATCTCTTCGCCGGTCCGTTCGC CGCCGACCTCCAGCGTCTTGCGCTGCGCATGGTCGAGTGGGCCGACGACG CAAGACTCCGACTCGTCGGGCGGCGCCATCTGCGCAGCAACAACTCGTGG ATGCACAACCTCACGGTGCTGGTGAAGGGCAAGCCTCGCTGCACCCTCCA ACTCCATCCCGACAACGCCGACGCGCTCGGACTCCACGACGGCGACGCGG CGATCGTGCGCTCGCGGGTGGGCGAGGTCATCGCACCCGTCGAGGTGACC GACACGGTCATGCCCGGAGTCGTGAGCCTTCCCCACGGCTGGGGCCACGG GAAGCCGGGCACCCGCATGGCCGTGGCCGGTGAGCACGCAGGCGTGAACA GCAATGTGCTCACCGACCCGTCCGTGATCGACCCGTTGTCGGGCAACGCC GTACTCAACGGCATCCCGGTCGAGGTCGTCCCCGCCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig76147:2..790+

>mRNA_M-pyrifera_M_contig76147.17962.1 ID=mRNA_M-pyrifera_M_contig76147.17962.1|Name=mRNA_M-pyrifera_M_contig76147.17962.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig76147:2..790+ (Macrocystis pyrifera P11B4 male)
ATGGGTCTGGGTCCCGACGCCGACCCGAAGTGTCTGCACGACCAGGTGGT
CGTCGGCCTCCTGCAAGCGGAGATCGACACGCCCGAGTCGCCGGTGGCGG
GTCGCGATCTCGATGAGTTGCTCGCCATGGTCGACGGCGACACCGGCGCC
GAACGGGTTCTCGATTGCATGCTGCGCACCGGGCCGCGCGGCGATGCGTT
CGGCATCCGTCCCGGCGGGCTCTCGCTGGCCCTGCTCAGCGAACGTCCCC
ACGGCATCGACTTCGGTGCCCTCGAACCTCGGCTGCCCACCCTGCTGCGC
ACGCCCGAACAGCGAATCGATCTCTTCGCCGGTCCGTTCGCCGCCGACCT
CCAGCGTCTTGCGCTGCGCATGGTCGAGTGGGCCGACGACGCAAGACTCC
GACTCGTCGGGCGGCGCCATCTGCGCAGCAACAACTCGTGGATGCACAAC
CTCACGGTGCTGGTGAAGGGCAAGCCTCGCTGCACCCTCCAACTCCATCC
CGACAACGCCGACGCGCTCGGACTCCACGACGGCGACGCGGCGATCGTGC
GCTCGCGGGTGGGCGAGGTCATCGCACCCGTCGAGGTGACCGACACGGTC
ATGCCCGGAGTCGTGAGCCTTCCCCACGGCTGGGGCCACGGGAAGCCGGG
CACCCGCATGGCCGTGGCCGGTGAGCACGCAGGCGTGAACAGCAATGTGC
TCACCGACCCGTCCGTGATCGACCCGTTGTCGGGCAACGCCGTACTCAAC
GGCATCCCGGTCGAGGTCGTCCCCGCCTAGATGGGTCTGGGTCCCGACGC
CGACCCGAAGTGTCTGCACGACCAGGTGGTCGTCGGCCTCCTGCAAGCGG
AGATCGACACGCCCGAGTCGCCGGTGGCGGGTCGCGATCTCGATGAGTTG
CTCGCCATGGTCGACGGCGACACCGGCGCCGAACGGGTTCTCGATTGCAT
GCTGCGCACCGGGCCGCGCGGCGATGCGTTCGGCATCCGTCCCGGCGGGC
TCTCGCTGGCCCTGCTCAGCGAACGTCCCCACGGCATCGACTTCGGTGCC
CTCGAACCTCGGCTGCCCACCCTGCTGCGCACGCCCGAACAGCGAATCGA
TCTCTTCGCCGGTCCGTTCGCCGCCGACCTCCAGCGTCTTGCGCTGCGCA
TGGTCGAGTGGGCCGACGACGCAAGACTCCGACTCGTCGGGCGGCGCCAT
CTGCGCAGCAACAACTCGTGGATGCACAACCTCACGGTGCTGGTGAAGGG
CAAGCCTCGCTGCACCCTCCAACTCCATCCCGACAACGCCGACGCGCTCG
GACTCCACGACGGCGACGCGGCGATCGTGCGCTCGCGGGTGGGCGAGGTC
ATCGCACCCGTCGAGGTGACCGACACGGTCATGCCCGGAGTCGTGAGCCT
TCCCCACGGCTGGGGCCACGGGAAGCCGGGCACCCGCATGGCCGTGGCCG
GTGAGCACGCAGGCGTGAACAGCAATGTGCTCACCGACCCGTCCGTGATC
GACCCGTTGTCGGGCAACGCCGTACTCAACGGCATCCCGGTCGAGGTCGT
CCCCGCCTAG
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