mRNA_M-pyrifera_M_contig7613.17957.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7613.17957.1
Unique NamemRNA_M-pyrifera_M_contig7613.17957.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: D8LDJ3_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDJ3_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 2.830e-83
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPP-KKHPLFKSRYMK 460
            RQEAQRLGRILRPK NVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQS LPDR+SE+RVL++TL AKTD EEK+EKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPP KKHPLFKSRY+K
Sbjct:  730 RQEAQRLGRILRPKSNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSKLPDRKSELRVLQETLMAKTDQEEKDEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPPPKKHPLFKSRYVK 883
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A7S2V0P5_9STRA (DNA helicase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0P5_9STRA)

HSP 1 Score: 159 bits (403), Expect = 6.990e-44
Identity = 91/157 (57.96%), Postives = 108/157 (68.79%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASD--RSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYMEYDSRPPK----KHPLFKSRY 454
            RQEAQRLGRILRPK   + GFNAFFYTLVSTDT EM+YS+KRQQYLVDQGYTFKVV DL   ++  R+QS LP  Q E+ VLR+ L A  + EE  E   L +D D IGE +    V R  G+L + SGADG+RYMEY +   +    +H LFK RY
Sbjct:  158 RQEAQRLGRILRPKATTEEGFNAFFYTLVSTDTREMFYSTKRQQYLVDQGYTFKVVNDLVEQAEEARAQSCLPTLQKELEVLREVLCADYEKEEAAESAALQKDQDYIGEENRTARVRRSAGSLASRSGADGTRYMEYSTGKKQDQSSRHTLFKKRY 314
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A662YBE6_9STRA (DNA helicase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBE6_9STRA)

HSP 1 Score: 139 bits (350), Expect = 8.100e-37
Identity = 82/155 (52.90%), Postives = 105/155 (67.74%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG--EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EMYYS+KRQQYLVDQGYTFKVVTDL       +     ++ +  +L + L+A  +   K+E   + RD +D+   E S  G   ++  +LGALSGADG++YMEY +     ++H LF+ RY
Sbjct:   91 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMYYSNKRQQYLVDQGYTFKVVTDLYEPGS-FEGVFTRKEDQRALLNEVLSADVESAAKDENAAI-RDDEDLSRLELSGHGRKRKKMVSLGALSGADGTKYMEYSAGHGAKQRHNLFRDRY 243
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A397D4G1_9STRA (DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D4G1_9STRA)

HSP 1 Score: 134 bits (337), Expect = 5.620e-36
Identity = 85/158 (53.80%), Postives = 107/158 (67.72%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+S DT EMYYS+KRQQYLVDQGYTFKVVT+L +     ++   D QSE+  L + L A+ DLE     K +D +  +I      E  +R +  ++K  +GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:    9 RQEAQRLGRILRPKANATGGFNAFFYTLISIDTHEMYYSNKRQQYLVDQGYTFKVVTELYD-----KATFEDSQSEL--LAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTTMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 153
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A2P4XQZ3_9STRA (DNA helicase (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XQZ3_9STRA)

HSP 1 Score: 142 bits (357), Expect = 3.390e-35
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG--EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EM+YS+KRQQYLVDQGYTFKVVTDL       Q     ++ +  +L + L+A  +   K+E   + RD +D+   E S  G   ++ G+LGALSGADG++YMEY +     ++H LF+ RY
Sbjct:  449 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLFEPGS-FQGVFTRKEDQRALLNEVLSADVESAAKDENAAI-RDDEDLSRLELSGHGRKKKKVGSLGALSGADGTKYMEYSAGHGAKQRHNLFRDRY 601
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A6A5AXV0_9STRA (DNA helicase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AXV0_9STRA)

HSP 1 Score: 134 bits (337), Expect = 4.700e-35
Identity = 84/161 (52.17%), Postives = 107/161 (66.46%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQ---SNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EMYYS+KRQQYLVDQGYTFKVVT+L + +       S    + S+  +L + L A+ DLE     K +D +  +I      E  +R +  ++K  +GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:   74 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMYYSNKRQQYLVDQGYTFKVVTELYDKATFEVIVVSVFTSKDSQSELLAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTTMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 228
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: K3WMY8_GLOUD (DNA helicase n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WMY8_GLOUD)

HSP 1 Score: 142 bits (357), Expect = 8.080e-35
Identity = 82/154 (53.25%), Postives = 108/154 (70.13%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRK-GNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EM+YS+KRQQYLVDQGYTFKVVTDL +  +  Q     + ++ ++L + L+A  +   K+E   + RD +D+      G   ++K  +LGALSGADG++YMEY +   P ++H LF+ RY
Sbjct:  667 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTDLYD-KETFQGVFTKKDAQRQLLNEVLSADVESAAKDENAAI-RDDEDLSRLELGGGRKKKKMSSLGALSGADGTQYMEYSAGHGPKQRHNLFRDRY 818
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A5D6XVJ4_9STRA (DNA helicase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVJ4_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.870e-34
Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG--EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EM+YS+KRQQYLVDQGYTFKVVT+L    D  Q     + ++ ++L + L+A  +   K+E   + RD +D+   E S  G   ++  +LGALSGADG++YMEY +     ++H LF+ RY
Sbjct:  685 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMFYSNKRQQYLVDQGYTFKVVTELFEP-DSFQGVYTKKDAQRQLLNEVLSADVESAAKDENAAI-RDDEDLARLELSGAGRKKKKTSSLGALSGADGAQYMEYSAGHGAKQRHNLFRDRY 837
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BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A024UEB9_9STRA (DNA helicase n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024UEB9_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.440e-33
Identity = 83/158 (52.53%), Postives = 110/158 (69.62%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EMYYS+KRQQYLVDQGYTFKVVT+L + S   +    +++++  +L + L A+ DLE     K +D +  +I      E  +R +  ++K ++GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:  658 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMYYSNKRQQYLVDQGYTFKVVTELYDKST-FEGVFTNKEAQSELLAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTSMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 808
[Close]
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Match: A0A397EX62_9STRA (DNA helicase n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EX62_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.020e-33
Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 2 
Query:    2 RQEAQRLGRILRPKPNVDGGFNAFFYTLVSTDTSEMYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLTAKTDLEEKEEKKMLDRDMDDIG-----EGSARGTVMRRKGNLGALSGADGSRYMEYDSR--PPKKHPLFKSRY 454
            RQEAQRLGRILRPK N  GGFNAFFYTL+STDT EMYYS+KRQQYLVDQGYTFKVVT+L +     ++   D QSE+  L + L A+ DLE     K +D +  +I      E  +R +  ++K  +GALSGADGS+YMEY +     ++H LF+ RY
Sbjct:  660 RQEAQRLGRILRPKANATGGFNAFFYTLISTDTHEMYYSNKRQQYLVDQGYTFKVVTELYD-----KATFEDSQSEL--LAEVLEAQ-DLE-----KFIDDENAEISKIGGDEDLSRLSGKKKKTTMGALSGADGSKYMEYSTGHGAKQRHNLFRDRY 804
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7613.17957.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDJ3_ECTSI2.830e-8392.86DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7S2V0P5_9STRA6.990e-4457.96DNA helicase n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
A0A662YBE6_9STRA8.100e-3752.90DNA helicase (Fragment) n=1 Tax=Nothophytophthora ... [more]
A0A397D4G1_9STRA5.620e-3653.80DNA helicase (Fragment) n=1 Tax=Aphanomyces astaci... [more]
A0A2P4XQZ3_9STRA3.390e-3553.55DNA helicase (Fragment) n=1 Tax=Phytophthora palmi... [more]
A0A6A5AXV0_9STRA4.700e-3552.17DNA helicase n=4 Tax=Aphanomyces astaci TaxID=1120... [more]
K3WMY8_GLOUD8.080e-3553.25DNA helicase n=3 Tax=Pythiaceae TaxID=4782 RepID=K... [more]
A0A5D6XVJ4_9STRA3.870e-3452.90DNA helicase n=1 Tax=Pythium brassicum TaxID=14850... [more]
A0A024UEB9_9STRA4.440e-3352.53DNA helicase n=8 Tax=Aphanomyces TaxID=100860 RepI... [more]
A0A397EX62_9STRA6.020e-3354.43DNA helicase n=4 Tax=Aphanomyces astaci TaxID=1120... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7613contigM-pyrifera_M_contig7613:4949..11857 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.9
Seed ortholog evalue6.5e-52
Seed eggNOG ortholog2880.D8LDJ3
Preferred nameERCC3
KEGG koko:K10843,ko:K11270
KEGG Pathwayko03022,ko03420,map03022,map03420
KEGG ModuleM00290
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000109,GO:0000112,GO:0000166,GO:0000428,GO:0000439,GO:0000717,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0001666,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006464,GO:0006468,GO:0006611,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007275,GO:0007346,GO:0007399,GO:0008022,GO:0008026,GO:0008094,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008544,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009650,GO:0009790,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009913,GO:0009987,GO:0010224,GO:0010467,GO:0010468,GO:0010525,GO:0010528,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010941,GO:0010942,GO:0012501,GO:0015031,GO:0015616,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016462,GO:0016591,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016973,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022008,GO:0022607,GO:0030154,GO:0030182,GO:0030554,GO:0030855,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031503,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032806,GO:0032991,GO:0032993,GO:0033036,GO:0033554,GO:0033683,GO:0034367,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035315,GO:0035639,GO:0036094,GO:0036211,GO:0036260,GO:0036293,GO:0040008,GO:0042127,GO:0042623,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0047485,GO:0048513,GO:0048518,GO:0048522,GO:0048568,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051052,GO:0051098,GO:0051101,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051254,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0055029,GO:0060255,GO:0060429,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070035,GO:0070482,GO:0070727,GO:0070816,GO:0070911,GO:0071103,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097367,GO:0097550,GO:0097659,GO:0140097,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901987,GO:1901990,GO:1902494,GO:1902554,GO:1902680,GO:1902911,GO:1903025,GO:1903506,GO:1903508,GO:1990234,GO:1990391,GO:2000112,GO:2000677,GO:2001141
EggNOG free text desc.ATP-dependent DNA helicase activity
EggNOG OGsCOG1061@1,KOG1123@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03021,ko03036,ko03400
Exons4
Model size758
Cds size360
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7613.17957.1prot_M-pyrifera_M_contig7613.17957.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7613 6552..11565 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816660.6387844-UTR-M-pyrifera_M_contig7613:4948..49911622816660.6387844-UTR-M-pyrifera_M_contig7613:4948..4991Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7613 4949..4991 +
1692278104.3012812-UTR-M-pyrifera_M_contig7613:4948..49911692278104.3012812-UTR-M-pyrifera_M_contig7613:4948..4991Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7613 4949..4991 +
1622816660.6553853-UTR-M-pyrifera_M_contig7613:6488..65511622816660.6553853-UTR-M-pyrifera_M_contig7613:6488..6551Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7613 6489..6551 +
1692278104.3136744-UTR-M-pyrifera_M_contig7613:6488..65511692278104.3136744-UTR-M-pyrifera_M_contig7613:6488..6551Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7613 6489..6551 +
1622816660.713235-UTR-M-pyrifera_M_contig7613:11565..118571622816660.713235-UTR-M-pyrifera_M_contig7613:11565..11857Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7613 11566..11857 +
1692278104.36091-UTR-M-pyrifera_M_contig7613:11565..118571692278104.36091-UTR-M-pyrifera_M_contig7613:11565..11857Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7613 11566..11857 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816660.6718543-CDS-M-pyrifera_M_contig7613:6551..66081622816660.6718543-CDS-M-pyrifera_M_contig7613:6551..6608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7613 6552..6608 +
1692278104.323033-CDS-M-pyrifera_M_contig7613:6551..66081692278104.323033-CDS-M-pyrifera_M_contig7613:6551..6608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7613 6552..6608 +
1622816660.6834018-CDS-M-pyrifera_M_contig7613:9778..99581622816660.6834018-CDS-M-pyrifera_M_contig7613:9778..9958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7613 9779..9958 +
1692278104.3333025-CDS-M-pyrifera_M_contig7613:9778..99581692278104.3333025-CDS-M-pyrifera_M_contig7613:9778..9958Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7613 9779..9958 +
1622816660.6976442-CDS-M-pyrifera_M_contig7613:11442..115651622816660.6976442-CDS-M-pyrifera_M_contig7613:11442..11565Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7613 11443..11565 +
1692278104.3465369-CDS-M-pyrifera_M_contig7613:11442..115651692278104.3465369-CDS-M-pyrifera_M_contig7613:11442..11565Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7613 11443..11565 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7613.17957.1

>prot_M-pyrifera_M_contig7613.17957.1 ID=prot_M-pyrifera_M_contig7613.17957.1|Name=mRNA_M-pyrifera_M_contig7613.17957.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MYYSSKRQQYLVDQGYTFKVVTDLANASDRSQSNLPDRQSEIRVLRDTLT
AKTDLEEKEEKKMLDRDMDDIGEGSARGTVMRRKGNLGALSGADGSRYME
YDSRPPKKHPLFKSRYMKF*
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mRNA from alignment at M-pyrifera_M_contig7613:4949..11857+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7613.17957.1 ID=mRNA_M-pyrifera_M_contig7613.17957.1|Name=mRNA_M-pyrifera_M_contig7613.17957.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6909bp|location=Sequence derived from alignment at M-pyrifera_M_contig7613:4949..11857+ (Macrocystis pyrifera P11B4 male)
AAGGCAGGAGGCTCAGCGCTTGGGGCGTATTTTGCGGCCAAAGGTGGGAG
CGCTCTCACAGTGTGGTTGTTGTTGCTGCTTCGGTTGCTGTTATTGTTGT
TCTCGCGTTCACTCGTCACCGAGATTCAGTCCGTGGTCACAAGATAGGCT
CCGTTACTCTGCAGTGTACAAAACCTCAGGAACAAAACAAAAACAAAAAT
AGTTCACTTGAATACTTGAAGCAAACCGTACACCCCAGACAAAGAAACAC
AAGTAAAATCAGCGTGACGTACGCCTAGTAGACTTCGCACAGCACGGTCA
AGGTCAATCGAAATCTTGCTCAATGTGCTGTGCGCAGTTCGTGAGGTGTA
CGTCCATAAAGGACGAATCCCCAGGTGCTGAATGTACCGTGCGAAGTAGG
TGAGGTGTGAGTACCCCCATGAAGGACGAATTCATAGGGCGTCTACTGAT
AGTATGCCCGGGGAGAGGCAAGGGGAAAGGGCGAGTGGCTTCCCTGGTGC
GGCTTGGGCGTGCGCACAGAGCGGCTTGGCTTAGCGAACCCCGGGCCGCT
GAGGTGTTCGCGTCGTTCAAGGGCGTCGACGTTATCTCCAGTGTCGCTTT
GGGTAGCTATTTTATGCCCGGCACCCGTTTGTTTGCCTATTTTTCTGAGT
CATTTCGATTGCCCATATTCAAATGGCCTGCGCTGCATGTAGTGTATCGA
GGTGCGAGTGTTAACTACGCCATACCTTGCTTCCCGTTTCAGGGATATCG
TGTTGATAGGACCATATGCGGTACGTGCAACGAGGCTAGTTCTTTTTGAG
CAAACTTGGTGACGTTGGGCTCGGTCTGCTTTGCTGTGTTCGTGTTTCTT
TCTTCGTGTTGTGGTACGTAGAACATGGGCTAATATGCCTGGCCCAGAGC
AAGAACGATGTAGCGTGTGAAGGAGCATCCGCTGGCCCCTTTGCACCGAA
CGGAAGCGAGAGCTTGCCTTGGAAAGCTGGCGTAGTGTGGGGCAGGAAGC
AATGGCATGAACATGGGAGCCCCCTCTCACCCACACATAGCAACATGACT
CGCTCTCGAACACGTTTTGACGTCCTACAATGGCTAAAAGACAGACTTCG
CCTTGGTTGCTGCAGCCTTGTCAACGCGCAGCACGTGGTGGTCATGGCAG
ACAAGCCTTGGGTGACTGTCGGTATGCTTTTTGGTTGTCGTTTTCTTTCT
ATGCTTTAATTGCAGCCTTGAGATTGATTCATAAGGTTGGATATCGTTTG
AGAATGGAGTTCGATATACGATGTATACGACATCGATACGCAAAAACAAA
TACGAGACGAACTCGATGTTCGACGCATCGGAGCTTTCGTTCTATATATG
CTTTAAAAAACACTGGGGTGCCAGAGGATGGAACAGGGGATGGAGGGCGA
TCACGTTCGATACGATATTTCAGAACTTTCGATACGATGCCCAACACTGC
TTGAGATTGATACGGCTGCTTTCGCAACTAATTACTGCCGACGCTGCTCG
ACCGTAAAACCCGTCGTATTTTGGCATTTTGACATGATAGCCGAACGTTG
ACGGGGGGTTCAACGCGTTTTTCTACACGCTGGTCAGCACGGACACCTCG
GAAATGTACTACTCCTCGAAGCGGCAACAGTACCTCGTCGACCAGGGCTA
CACCTTCAAGGTGATCGAAGTCACCAAACGTATTACATGTTCATCGCAAG
ATACCTAAAGCAAACAAGAGAAGGACAGTTTACGTGAACACAATGTAGAG
ATCAGCTTTGACGGATGTTGCAAGAGTTTTCGGGTAGTTCATTCAAATTC
TTCGTGTCCACCCGAGGATGGGGATGGAGATACCGAGTGTTAGTGCGAAG
TACCTGGTATGTACATACCACACGAAGGACTTGGTTTTGCCCTCTCCTCA
TTCCTGGTACTGCTGCACCTGCTGCACCTGGTACATACGGTGCAGAAGTT
TATATGTGCAGTATGCCAGGCACAGTGTAATGTAGTGTAATGTAACTGGA
GTGTGGCACTGGTGCATGCATGCGGTATATAGAGGTCCACCTGCAGTGGT
GTTTTCAGAGGCTACTCACTTGATTATAATATAAGAGCTCTTTACCTCAC
CCAAAAAACTGTCTTTGTAGAAAACATTAAGGTACCAAACCAATCCCATT
ATAACCTACTGTACGAAGGTACGCAACGAGCAGTCTTGTAAATCACACCT
TGGACAATCCTAATATTGCGGGGGGGGCATAGTAAATAGGACCTACGGCA
CACATAAAAACCTATACATTTACCTATTTTTACTAACAATATTTGGAGCT
ATGTACTATGGTCCCCCGCAATAATATTTAATATGCCTACTTCCTCTGTC
CCATAAGTAAAGTCCGTTATGGCGTGCAAATCATCATCTTGCCTCTTGAA
CGCAGTAGGGTACGATGCTATTCTTAGGTTCGTTGAAAATATCTAGTTAC
GGAGATGGCCATACCAAAAAAAAAAAAAAACGACACAAACGTACTGAGAA
CGTGGGCGTCAAATATGGGAATATTTTGAGAATTTCATTGAGATTTTTTT
TAGTTTTGACGTTTGAGCGCCTACTATCACCACGACCACGCAACTACCAT
GGACGATAACACCCATGCAACTCCCCGTCGTAAACGGGGGGGCGAAGTAA
CGTTGGGCCGCCGTTACGCCATGGCAGTGGAGATAGCGCAGGCGACTAAC
GTTTTTTTTCTTGTGTGTATGTGTTTTTTTTTCCAAACACTTTTTTACCC
CTGGAAAAGGGGTTAGATGCGGCCATTTTTGGGCCGACTGATTTCTTCCG
GCCGCTCACCCATGCTGGGTGGTGCGCGGAAGAAAAAAAACGGGTTTCAA
CTAAAAAACACCAAAGATTTCAAAAAAATATCGCTGACGGCATCGGACAC
GGCTAAGGGTCCGTGTAAGTCTTAGCGGATTTTACTTACCAGGTATCTGT
TATGGGACAGAGGAAGTATATCCCCACGACGCTACTTATTGTACCGATTT
TTGCTGTTGACCTATTGGTTAAAAAAAGTAGAATATCGAAAATCCCAGGT
TGCTTTTGGTATCGATATCCAACACCCCAAGCTGTTGACAAGCTAGGCAC
GTTCGGTAGGCTACTGTCCGAGTTGTGTTGTAGAAGCATCCAACGGTACT
GGGTAGTTCCTCGGTGCTGGCTGTGCCCTGGCGGACCCCCATCAGTCAGA
AAATATGTTAGTAAAAAAATTTAGGGCTGGGCAATAGCACTGTAGGTACT
CGCAGTAGTAGTCAAGTGATTGCTCCGGCCGATGTATTCCCCATCGTCTT
TTTTATCTTACGTTCGTCCAAGAAACATGCCACGTCATACGTAGTACGGA
AACCCAGCAGATGCGTTCCGGCGGGAGAAAGGAGGGAAGAGAGGACAGAC
AGTATAAGTGCTACTGACTGAGTCAGCCAGTGCCCAGCCCTACTGACATC
GCAGCACGTGCAGTATTACTACTCTTGCTGTTGCCGTGCTGGCCTCAAAC
CTCACACAGTTCTCTTCCGAATTAGAATGCCTGAGAGCATTCGGCCACCT
TTTTTTGTGCGTAGTTTATCGTTTCTTGGGCTTTTTTCAGCGTTATTTTT
TCATGGCTCTCTCGAAACGGACACCCGTTTCAGCGACAGCAGTGGCAAAG
AGGACGGTGTACAGTAGTTTTCTATAGTATATTGCATGTTAAAGTGCTGC
TCGATGTAGAGGCCAACTTGTCTTCCCGGTGTATATACATAGGCATTTTA
AAACAAACTGGGATGTATATCGAATGACAGCTGTGCTTAACGGAGCAAGT
TTTGCCGATTTTTTCGACTCATTGTTTTTTATTTCCAGATAATGCAAAAA
CCAAAATGAAAGTTTTTCGAAATTTACTGCCAGAACACATGGAAGGCGTA
AGTTTCCATTATTTCGATTTTTCTGGCATCTAGTTGAAAGTGAAGAAAAA
ATACTGGGAGCATTCGACAGACACTTGCTCCGAGAAGCACGGCCCTAAGA
CAGGAGCGCTAAAGAGAACTGCGGGCACGAACTCAAAAATATATTTATCT
CTTTACGTAGCAAGTCGAACGGCTCTCATGGAATTACGAGCGACGAATCA
AGCGCCGGCCAACAGGACCAGGAGGTATAGCGTACTTGTTCGAGATTTGG
TCTAGTTGGCTTAGGGTAAGCATTAGAGTTGCTCCGATTGGCTTAGGGTC
AGGGTTGGCGTAAGGGTCGGTTTTTTGCGTCTCGCACACAGTGTGTGTCA
ACCTTTTTCTCGAATAAGGGTCAGGGATAGGGCTAGGGCTCCCCTCGGAC
GAGAACCTGTTGCATGAAAAAGTTGACTTATATATACATGGCTCCTGCAG
CTACTCGTATCGTGGTTTTGTTTTTGAGTCTGGGCAAATTACCCATTATA
TGGTGTTTTTTGTCGTAATCTCGCGGAACGAGTTATAAATATCACGTGGT
GCTGTGGTGATATTATCTTGCCGATACCTTTCATATCAGCTACATATCCG
ATTTGGTCTTACTCTGAAAACAGACCGAGTTATGCTCGACTCTTACCAAA
CTCCCACCCTCCGTACCAGTCAGTTTCACTTTGATTCTCTTTTTGAACGT
ATGGACGTGTTTCGCCAACACGCATTACAGCAGTAAACGTTTGCGATGAG
TTCATGCCAGATCGACAATCACCGTCGAAGGCGACAAGCTACCAGGTATA
CTGGGTACAGAGTAAGCTAGACTAAAGCGCGGGCGTTGTCGTGCCCACCC
ATTCCCCCTGAAATGTGACCGACGCCCACCCCCACGCCCATCCCCACCCG
CACCCGCTCCCCCTGTCGTTCCCACGGCAGGTGGTGACGGACCTCGCAAA
TGCTTCTGATCGATCACAAAGCAACCTTCCTGATCGACAGTCTGAGATCC
GAGTCCTGAGAGATACCTTGACAGCGAAGACCGACTTGGAAGAGAAGGAG
GAGAAGAAGATGCTCGACCGGGACATGGACGACATAGGGGAAGGTTCTGC
CAGGGGGACGGTGAGAGTTTGTCGTGGGCGCACTCCCCAACGGTCCAAGT
ACTGGGGGGGGGGGGAAGGGTCTGTGATCAGATTCTATCGCGGGCACTAT
AAAGTGGGCCAAGTATTGAGGAGGGGGGGGGGGGGGATATGAGAAAGGTC
TGCAAACGGGAAGGCCATGTCTGTCGCGGACACTGTCAAACGGCCCAACT
ACTTAGGGGGGGGTGCTAATAGGAGCTACTCCTGTATATTTTACTAGCCA
AATGGATTCCTGGGGGTTGATTTCGGTCAGTGCGGGTCGCGTGATTGGAG
CGTTTTGTCGAGGATCCAGAAATTCTCGATGGTTTTGAATGGCACAGGCT
TTCGTGCTTGTGCTGCGCTCGCTTTAGGCTACTAAGCTAATGCCATAAGT
TTTTTCCCGTCATTCGCAGTCGTTTGTCCTGCGTGGGTGTGCGTTGCAGG
TGCTTGCCGTTGTGTTTTTGTCGATGCCGTTTACGTCTGGTTTCTCATGG
AAACTTATGTTGCAAAATGGTATTTGATTTTTCGGCGAAATTTCGAGCTG
GTGATGTTTCTCGTACAGTACGACCCGAGAGCATGGCCATGACCATCCTC
GTATCGTACAGAACGCACAACGGTGCTTTGACGCGGTCCAACTCGTGCTC
CACCTGTACACACCCGCTACTGTAGCTAGTGCCACGGACGCCGATCGACC
CCTCACTCTGTAAATGAGACGATGTCAATCTTTTGGGAATCAAGGACAGC
GAAAAGTGTATCGGTGGTCGATAATTTGCATCGGCTATGAATGCGTACAA
AACGATATTCTGAACACGGGCTATTATCTCGTACCTGGTAGTAGATTTCC
AGGAAACGAGCTAGTGTAAGAAAAATATTATCCATGTTTTATTTCTATTC
CACTACTGCTCTCCCCGTGCCGAAGGTGTCGCGGTGACGAGCTCTTCATC
CCTGATGCCTGCGGGGGGGTCGTTAACGGCCGACCGTCCCTAGCACTTTC
CTCTCGTATCGTGTAGCAAGGAGACGGTGTTACGGGGGGCCATATTAAAT
AGGACCTACGGTAGACACTAAACCCTATATATTTCGCTATTTGTACTAAC
AATATTTGGTCCTATTTCCTACGGTCCCCCATAGTAAGAGTCTATGTCTT
GAACTGAGCCTAGGGGCGGGTTGCCGAGGCAACCAAAGCACCCTCGAAGC
GTTGTTTTCGGTCCCAGGAGAACCGGTTCCGCATTGGATAACCCCGTCTA
TCCTTCACCGAGGCGGTCGACCTTAACGAAGGGGCCACTTGCGACCTGAG
ATCGGCGACCCGGCAGGCTCTTTCAGGCCTAGCGTTTGAGGTTTCCGTCG
GTCCATGTCTGGTTCCGAGGTCTACGATGTATATGTATCTACCCTGTTCT
CCACACCTGGACTAATTAGTTGAATTGTCCATCATGCCCTTGTTTTTTTT
GGCTAACGCGAATTTGCTAACCCCTGTCTTGGTGTACGGTACAGGTGATG
AGACGGAAGGGCAACCTTGGAGCGCTGTCGGGCGCAGACGGGTCGCGGTA
CATGGAGTACGACTCAAGGCCACCCAAGAAGCACCCCTTGTTCAAGTCTC
GGTACATGAAGTTCTGATACCTGATGGGTTACGCCTGTAACTATTAATAG
TTGAAGAGCAGAAGTTCCAGAAGATTATCGAGTCTTCTTAGGGCGAAAAT
ATGCTGCGTCATAGGTCTGGGCGTGGGGCGATCTAGTGCATCGGATAGTG
GGTACCTACTGCTGTAGTAGTTGGTTTTGTTTTGCCGCGCTCCAGGAGTC
GAACGCGGCGTTCCTTACAGGAGACTCCGATACAGCCCTACTGCTGCTGC
TGCTGTTGTTGCTGCTCGGCGTTCCTCACAGGAGACTCCGATACTGCCCT
GCTGCTGTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7613:4949..11857+

>mRNA_M-pyrifera_M_contig7613.17957.1 ID=mRNA_M-pyrifera_M_contig7613.17957.1|Name=mRNA_M-pyrifera_M_contig7613.17957.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig7613:4949..11857+ (Macrocystis pyrifera P11B4 male)
ATGTACTACTCCTCGAAGCGGCAACAGTACCTCGTCGACCAGGGCTACAC
CTTCAAGATGTACTACTCCTCGAAGCGGCAACAGTACCTCGTCGACCAGG
GCTACACCTTCAAGGTGGTGACGGACCTCGCAAATGCTTCTGATCGATCA
CAAAGCAACCTTCCTGATCGACAGTCTGAGATCCGAGTCCTGAGAGATAC
CTTGACAGCGAAGACCGACTTGGAAGAGAAGGAGGAGAAGAAGATGCTCG
ACCGGGACATGGACGACATAGGGGAAGGTTCTGCCAGGGGGACGGTGGTG
ACGGACCTCGCAAATGCTTCTGATCGATCACAAAGCAACCTTCCTGATCG
ACAGTCTGAGATCCGAGTCCTGAGAGATACCTTGACAGCGAAGACCGACT
TGGAAGAGAAGGAGGAGAAGAAGATGCTCGACCGGGACATGGACGACATA
GGGGAAGGTTCTGCCAGGGGGACGGTGATGAGACGGAAGGGCAACCTTGG
AGCGCTGTCGGGCGCAGACGGGTCGCGGTACATGGAGTACGACTCAAGGC
CACCCAAGAAGCACCCCTTGTTCAAGTCTCGGTACATGAAGTTCTGAGTG
ATGAGACGGAAGGGCAACCTTGGAGCGCTGTCGGGCGCAGACGGGTCGCG
GTACATGGAGTACGACTCAAGGCCACCCAAGAAGCACCCCTTGTTCAAGT
CTCGGTACATGAAGTTCTGA
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