mRNA_M-pyrifera_M_contig76103.17951.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A7M5WZA3_9CNID (DNA polymerase epsilon catalytic subunit n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WZA3_9CNID) HSP 1 Score: 199 bits (505), Expect = 1.190e-54 Identity = 107/249 (42.97%), Postives = 156/249 (62.65%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRH---PERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQ--HKAAFQQQSDVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 AR L R+NHVLW+S T+ PD+G +EEDN + V E PE PGCY+TVC+++ + +LA+NT+L+SHHVHD EG+A +A+ ++ + SG AA S D+ +C +F+VLK LI W EV ++ RN+ A+ L HF+R+ S A L+D AL + IH LM+K F QL+AEFK LGS +V+ANF++I + + KR +DA+ Y +I +I +PLF +I L+P W+ Sbjct: 1674 ARHLSRSNHVLWISPTDRPDLGGKEEDNFRLVTEFDEGGSPEINQPGCYSTVCVEISIDSLAVNTVLQSHHVHDAEGVASSLDTIQQASLEEMLNSRSG---------AAATLTSYDEAASCAQSFKVLKGLIISWIQEVFAN---RNDFADTQLIHFYRYLRSPEAMLYDPALCKYIHGLMKKFFMQLIAEFKTLGSTIVYANFNKIILNSKKRRVKDALAYVQYILTSIRSKPLFKNIALEPRSCWE 1910
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A6J0U8Y0_9SAUR (DNA polymerase epsilon catalytic subunit n=11 Tax=Episquamata TaxID=1329912 RepID=A0A6J0U8Y0_9SAUR) HSP 1 Score: 195 bits (495), Expect = 2.590e-53 Identity = 102/249 (40.96%), Postives = 158/249 (63.45%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 +R L R+NH+LW+S T+ PD+G RE D+ + V E E PGCY+TVC++L L++LA+NTIL+SHHV+D+EG + + A QQ S D+ +G Q A++ S D+T C FR+LK+++ W E+ + RN +A+ + HF+RW S + L+D AL +++H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR EDA+ Y +I +I + +F + + R W+ Sbjct: 1412 SRHLHRHNHLLWLSPTSRPDLGGREADDSRLVMEFDERVSVEINHPGCYSTVCVELDLQSLAVNTILQSHHVNDMEGASSVCVSFDAIQQASLEDMVTGNQ-------AASLPASYDETALCSNTFRILKSMVVGWVKEIT---QYRNVYADNQVIHFYRWLRSPTSLLYDPALHRMLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDALAYVEYITNSIHSKEIFHSLTISFSRCWE 1650
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A0B7AER0_9EUPU (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B7AER0_9EUPU) HSP 1 Score: 187 bits (474), Expect = 5.870e-53 Identity = 99/247 (40.08%), Postives = 149/247 (60.32%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQSDVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 ARL ++NH+LW S T PD+G +E D+ + EL E PG Y+TVC+ ++L +LA+NTI+ES H++D+EG + +S A ++ G+ A M S D+T C FR+LK ++ W +V S RN HA+ L HF+RW S A L+D AL++ +H +M+KVF QL++EFK+LGS +VHANF+++ +CT KR EDA+ Y +I +I R +F IG+ + W+ Sbjct: 79 ARLATKHNHILWASATYRPDLGGKEADDNRLCMELEDNILVEMNNPGAYSTVCVDVELTSLAVNTIVESGHINDLEGASAVSFDSAPQTSLEEMVKGQG-------AAMMLASYDETALCATTFRILKFMVQGWLKDVTSH---RNCHADNQLMHFYRWIRSPNALLYDPALRRTLHNMMKKVFMQLISEFKRLGSVIVHANFNRLIVCTKKRHIEDAMAYMEYITSSIRSRDIFHMIGIDFDKCWE 315
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: UPI0005217A10 (DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005217A10) HSP 1 Score: 189 bits (480), Expect = 1.670e-52 Identity = 100/251 (39.84%), Postives = 159/251 (63.35%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAV-----PGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 +R L+R+NH+LW+S T PD+G +E D+ + V E ERA PGCY+TVC++L +++LA+NT+L+SHHV+D+EG + +S QQ S D+ +G Q A++ S D+T C FR+LK+++ W E+ + N +A+ + HF+RW S + L+D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR EDA++Y +I +I + +F + + R W+ Sbjct: 41 SRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEF--DERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQ-------AASIPASYDETALCSNTFRILKSMVVSWVKEIT---QYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDALSYMEYIISSIHSKEIFHSLTISFSRCWE 279
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A2I0LKE3_COLLI (DNA polymerase epsilon catalytic subunit n=1 Tax=Columba livia TaxID=8932 RepID=A0A2I0LKE3_COLLI) HSP 1 Score: 192 bits (487), Expect = 2.980e-52 Identity = 100/251 (39.84%), Postives = 159/251 (63.35%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAV-----PGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 +R L+R+NH+LW+S T PD+G +E D+ + V E ERA PGCY+TVC++L +++LA+NT+L+SHH++D+EG + +S QQ S D+ +G Q A + S D+T C FR+LK+++ W E+ + RN +A+ + HF+RW S + L+D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR EDA++Y +I +I + +F + + R W+ Sbjct: 1300 SRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEF--DERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGCSSMSISFDVIQQASLEDMVTGNQ-------AANIPASYDETALCSNTFRILKSMVVSWVKEIT---QYRNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWE 1538
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A7L4G424_9COLU (DNA polymerase epsilon catalytic subunit (Fragment) n=15 Tax=Neognathae TaxID=8825 RepID=A0A7L4G424_9COLU) HSP 1 Score: 192 bits (487), Expect = 3.090e-52 Identity = 100/251 (39.84%), Postives = 159/251 (63.35%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAV-----PGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 +R L+R+NH+LW+S T PD+G +E D+ + V E ERA PGCY+TVC++L +++LA+NT+L+SHH++D+EG + +S QQ S D+ +G Q A + S D+T C FR+LK+++ W E+ + RN +A+ + HF+RW S + L+D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR EDA++Y +I +I + +F + + R W+ Sbjct: 1690 SRHLRRHNHLLWLSPTARPDLGGKEADDNRLVMEF--DERASVEINNPGCYSTVCLELDIQSLAVNTVLQSHHINDMEGCSSMSISFDVIQQASLEDMVTGNQ-------AANIPASYDETALCSNTFRILKSMVVSWVKEIT---QYRNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWE 1928
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A8J6DPB7_GALPY (DNA polymerase epsilon catalytic subunit n=3 Tax=Talpidae TaxID=9373 RepID=A0A8J6DPB7_GALPY) HSP 1 Score: 191 bits (486), Expect = 4.230e-52 Identity = 103/249 (41.37%), Postives = 153/249 (61.45%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 AR LQR+NH+LW+S T+ PD+G +E D+ + + EL E PGCY+TVC++L ++NLA+NTIL+SHHVHD+EG + + Q S D+ +G Q A+ S D+T C FRVLK+++ W E+ N +A+ + HF+RW S + L D AL + +H LM+K+F QL+AEFK+LGS VV+ANFH+I +CT KR +DA+ Y +I +I + +F + + R W+ Sbjct: 1787 ARHLQRHNHLLWLSPTSRPDLGGKEADDNRLLMELEDQAPVEINSPGCYSTVCVELDVQNLAVNTILQSHHVHDMEGAGSVGVSFSVVPQASLEDMITGVQ-------AASALASYDETALCSGTFRVLKSMVVGWVREITQH---HNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHGLMKKLFLQLIAEFKRLGSLVVYANFHRIILCTKKRRIDDALAYVEYITSSIHSKDIFHSLTISFSRCWE 2025
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: G9KHP0_MUSPF (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Mustela putorius furo TaxID=9669 RepID=G9KHP0_MUSPF) HSP 1 Score: 190 bits (482), Expect = 4.410e-52 Identity = 100/249 (40.16%), Postives = 155/249 (62.25%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 AR LQR++H+LW+S T+ PD+G +E D+ + V E E PGCY+TVC++L L+NLA+NTIL+SHH++D+EG + QQ S D+ +G Q A+ S D+T C FR+LK+++ W E+ + RN +A+ + HF+RW + + L D AL + +H++M+K+F QL+AEFK+LGS VV+ANF++I +CT KR EDA+ Y ++ +I + LF + + R W+ Sbjct: 203 ARHLQRHSHLLWLSPTSRPDLGGKEADDNRLVMEFDDQASVEINCPGCYSTVCVELDLQNLAVNTILQSHHINDMEGADSVGISFDVLQQASLEDMITGNQ-------AASALASYDETALCSSTFRILKSMVVGWVKEIT---QYRNVYADNQVMHFYRWLRAPSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLGSSVVYANFNRIILCTKKRRVEDALAYVEYVTNSIHSKELFHSLTISFSRSWE 441
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: A0A480X9Z1_PIG (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A480X9Z1_PIG) HSP 1 Score: 188 bits (478), Expect = 4.470e-52 Identity = 101/249 (40.56%), Postives = 153/249 (61.45%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHP---ERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQS--DVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 AR LQR+NH+LW+S T+ PD+G +E D+ + V E E GCY+TVC++L ++NLA+NTIL+SHHV+D+EG + QQ S D+ +G Q A+ S D+T C FR+LK+++ W E+ + RN +A+ + HF+RW S + L D AL + +H +M+K+F QL+AEFK+LGS VV+ANF++I +CT KR EDA+ Y +I +I + +F + + R W+ Sbjct: 387 ARHLQRHNHLLWLSPTSRPDLGGKEADDNRLVMEFDDQAPVEINSSGCYSTVCVELDIQNLAVNTILQSHHVNDMEGADSMGVSFDVIQQASLEDMITGNQ-------AASAPASYDETALCSSTFRILKSMVVGWVKEIT---QYRNVYADNQVMHFYRWLRSPSSLLHDPALHRTLHGMMKKLFLQLIAEFKRLGSSVVYANFNRIILCTKKRRVEDALAYVEYITNSIHSKEIFHSLTISFSRCWE 625
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Match: D3BMV7_POLPP (DNA polymerase epsilon catalytic subunit n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BMV7_POLPP) HSP 1 Score: 191 bits (485), Expect = 5.740e-52 Identity = 96/244 (39.34%), Postives = 151/244 (61.89%), Query Frame = 1 Query: 1 ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAVPGCYTTVCIQLQLRNLAINTILESHHVHDIEGIAKLSQHKAAFQQQSDVTSGRQQKGKEEETAAMADSLDDTDACLPAFRVLKNLITQWHLEVGSSPEVRNEHAEMLLDHFFRWASSSRAYLFDTALQQLIHTLMRKVFFQLLAEFKKLGSKVVHANFHQITICTTKRSREDAVNYCNFICKTIGMRPLFSHIGLQPVRFWD 732 +R+L+ +NH+LW+S +N PD+G EED+ KF EEL E PGCY + C +L + LA+NTILES H+ DIEGI + + + S +Q E+ A +++ ++C F +L+ ++T+W L++ N ++LL HF+RW SS + ++D + + +H LM+KVF QL+ EFKKLG KV++ NF++I +C+ K S EDA YC++I I + LFS I ++P +FW+ Sbjct: 1713 SRMLKESNHLLWMSLSNCPDLGGSEEDDAKFHEELGKTEINQPGCYNSACFELNIGGLAVNTILESSHLADIEGIIGGQLNNGDSETLNFDNSVDKQPNYEKIVKTSA-AMEQFNSCDKEFNILRKMVTRWSLDLVMGNRRNNPTPDLLLTHFYRWISSPYSGMYDPIIHRTLHGLMKKVFLQLIFEFKKLGCKVIYGNFNRIILCSQKTSIEDAKQYCSYIITVIKKKELFSWITIKPTKFWN 1955 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig76103.17951.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig76103.17951.1 >prot_M-pyrifera_M_contig76103.17951.1 ID=prot_M-pyrifera_M_contig76103.17951.1|Name=mRNA_M-pyrifera_M_contig76103.17951.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp ARLLQRNNHVLWVSDTNNPDVGMREEDNCKFVEELRHPERAVPGCYTTVCback to top mRNA from alignment at M-pyrifera_M_contig76103:3..799- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig76103.17951.1 ID=mRNA_M-pyrifera_M_contig76103.17951.1|Name=mRNA_M-pyrifera_M_contig76103.17951.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=797bp|location=Sequence derived from alignment at M-pyrifera_M_contig76103:3..799- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig76103:3..799- >mRNA_M-pyrifera_M_contig76103.17951.1 ID=mRNA_M-pyrifera_M_contig76103.17951.1|Name=mRNA_M-pyrifera_M_contig76103.17951.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig76103:3..799- (Macrocystis pyrifera P11B4 male)back to top |