mRNA_M-pyrifera_M_contig75963.17922.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A7Y2IJA3_9ACTN (LytR C-terminal domain-containing protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IJA3_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 1.990e-14 Identity = 66/169 (39.05%), Postives = 90/169 (53.25%), Query Frame = 1 Query: 1 MTAGAHDAGGGFSRSAGTNAARGVMVIVAAVAVGLLLMFRGIND-----SGDDTAAESTE---APAETGGEGQDPAGAGDTASTTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEANAV 483 M GAHDAGGGF +S GT+A RGV VI+AAVAVG +LM+ G +D S DD+A +T+ A ST P+ + V+ P +VKVLVLN A N+ G+AG GT +++ + YV L+ DA + P+ + Y Y A+A AV Sbjct: 1 MNTGAHDAGGGFGQSVGTSAGRGVAVILAAVAVGAILMWLGYSDQTVDASSDDSAQTTTDDGAAXXXXXXXXXXXXXXXXVTSTAPPSTEXXXXXXPPAVARPA---DQVKVLVLNA--AVNKR-GIAGRGTAIVEQAGYVTLKAGDAKKDQPTEIQYAPDYEADAIAV 163
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A351IU03_9ACTN (LytR_C domain-containing protein n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A351IU03_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 1.380e-12 Identity = 62/174 (35.63%), Postives = 89/174 (51.15%), Query Frame = 1 Query: 1 MTAGAHDAGGGFSRSAGTNAARGVMVIVAAVAVGLLLMFRGINDS---GDDTAAESTE--APAETGGEGQDPA--------GAGDTASTTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEANAV 483 M AGA GGG + S R +++ AVA+GLL++++G++DS D A T+ A A++G G DPA G A PT A T T + + P DP+EVKVLV NG+ +G AG TD+L P + + P +AD G + V+Y Y A+A + Sbjct: 1 MNAGAR--GGGLAPSNAAAMPRAALLVGVAVAIGLLMLWKGLDDSPLAADRQAPALTDDVAGADSGTGGADPAVVTTEPVGGEPADADVVTPTSAAPTTTEALFPTTPTHDPNEVKVLVANGSGV----SGAAGKVTDMLSPLGWTMESPANADKTGTTRVYYRTEYHADARKI 168
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A800LR27_9ACTN (LytR family transcriptional regulator n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LR27_9ACTN) HSP 1 Score: 68.2 bits (165), Expect = 4.650e-11 Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = 1 Query: 1 MTAGAHDAGGGFSRSAGTNAARGVMVIVAAVAVGLLLMFRGINDSG-------DDTAAESTE-----------APAETGGEGQDPAGAGDTASTTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEA 474 M+ G GGG S A RGV++IV AVA+G+LL+++G+ S ++TA +TE AP ETG +G+ P D +T TT V+ P P+EV VLV NG R + A + TD + P+ Y +L P +ADV + +FY G+L EA Sbjct: 1 MSNGRRSKGGGLGPSNAAAAPRGVLLIVVAVALGVLLLWKGLGASEFAVAPTPEETATTTTEGVTTDTTDGPEAPTETGIDGE-------------PLD--TTTTTIFPVATLP--PNEVTVLVANGA----RISRAATSVTDRITPAGYTLLAPANADVTTQTTIFYRSGFLNEA 155
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A381VUC8_9ZZZZ (LytR_C domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381VUC8_9ZZZZ) HSP 1 Score: 58.5 bits (140), Expect = 1.890e-7 Identity = 51/176 (28.98%), Postives = 79/176 (44.89%), Query Frame = 1 Query: 25 GGGFSRSAGTNAARGVMVIVAAVAVGLLLMFRGINDSG--------------DDTAAESTEAPAET---------GGEGQDPAGAGDTASTTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEANAV 483 GGG S A R ++I AV +GL+L+++G++D+ DD +A TE + T GGE + P PT + TT P P+EVKVLV NG+ +G AG TD+L P + + P +A+ + ++Y Y+A+A + Sbjct: 5 GGGLGPSNAAAAPRAFLLIAVAVVLGLVLLWKGLDDTPGLRPLVDGGAEAAVDDGSAGGTEGVSGTITPTSTQAVGGEAEPP-----------PTTTVAPTTTQELFPMPTHAPNEVKVLVANGSGV----SGAAGKVTDLLSPRGWAMESPANAEKASATRIYYRTEYVADAKVI 165
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A2E8BH54_9ACTN (LytR_C domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8BH54_9ACTN) HSP 1 Score: 58.5 bits (140), Expect = 1.910e-7 Identity = 51/160 (31.87%), Postives = 76/160 (47.50%), Query Frame = 1 Query: 31 GFSRSAGTNAARGVMVIVAAVAVGLLLMFRGINDSGDDTAAESTEAPAETGGEGQDPAGAGDTAS---------TTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEANAV 483 G S + A R ++I A+ +GL+L+++ + DS T A S A E + + GDT + V T+ TT++ P R PS+VKVLV NG+ G AGA TD+L P Y + P +A+ S +FY G+ +A V Sbjct: 11 GLGPSNPSAAPRAFLLITVALILGLVLLWKAV-DSDVGTVAVSDSAAVEGADQVDEIPDTGDTGAPVDEVAGTDAVVTTEPVVATTTTSAPLFPSRSPSDVKVLVANGSGI----GGAAGAVTDILNPRGYALESPANANRTDVSGIFYRTGFADDARMV 165
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A2E0ZPP3_9ACTN (LytR_C domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0ZPP3_9ACTN) HSP 1 Score: 58.2 bits (139), Expect = 2.230e-7 Identity = 52/163 (31.90%), Postives = 74/163 (45.40%), Query Frame = 1 Query: 25 GGGFSRSAGTNAARGVMVIVAAVAVGLLLMFRGINDSGDDTAAESTEAPAETGGEGQDPAGA----------GDTASTTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEANAV 483 GGG S G A R + AV +G L+++G++D D + + T G+G G G T ST PT ++ PP SEV+VLV NG+ TA AG+ T++L P Y L P +A + +F+ G +AEA AV Sbjct: 7 GGGLGPSNGAAAPRALXXXXXAVLLGAALLWKGLDDGTDLVSDQPVPTTTATTGDGTPDDGXXXXXXXXXXXGTTTSTLFPT-----------ITEPP---SEVQVLVANGSG----TARAAGSVTELLVPKGYATLAPANAQPTDSTMIFFRPGMVAEARAV 151
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A7K1Z8G2_9ACTN (LytR family transcriptional regulator n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z8G2_9ACTN) HSP 1 Score: 55.8 bits (133), Expect = 1.680e-6 Identity = 58/161 (36.02%), Postives = 79/161 (49.07%), Query Frame = 1 Query: 34 FSRSAGTNAARGVMVIVAAVAVGLLLMFRG---------INDSGDDTAAESTEAPAETGGEGQDPAGAGDTASTTVPTDDASTETTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGP--SAVFYTEGYLAEANAV 483 F++S T AARG ++IV A+ +G+LL+++G + D D+T + E A G+DP DT +T PT T+ V P P+ VKV VLNG G+AGA D L + YV E +AD S V+YT GY EA V Sbjct: 14 FTKSTATAAARGGILIVIAIVIGVLLLWQGFDSDEPITTVEDETDETGDNAEEEEATPTTAGEDPEEV-DTPTTAAPT-------TAAPVVVDP--PNSVKVAVLNG----RGEPGLAGARKDHLTTAGYVA-EGFNADTFDKEFSRVYYTPGYEDEAELV 159
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Match: A0A381PL86_9ZZZZ (LytR_C domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381PL86_9ZZZZ) HSP 1 Score: 50.4 bits (119), Expect = 7.570e-5 Identity = 31/75 (41.33%), Postives = 41/75 (54.67%), Query Frame = 1 Query: 259 TTSTTVSAPPRDPSEVKVLVLNGTDADNRTAGVAGAGTDVLKPSNYVVLEPKDADVNGPSAVFYTEGYLAEANAV 483 TTST PSEV+VLV NG+ TA AG+ T++L P Y L P +A + +F+ G +AEA AV Sbjct: 30 TTSTLFPTITEPPSEVQVLVANGSG----TARAAGSVTELLVPKGYATLAPANAQPTDSTMIFFRPGMVAEARAV 100 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75963.17922.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75963.17922.1 >prot_M-pyrifera_M_contig75963.17922.1 ID=prot_M-pyrifera_M_contig75963.17922.1|Name=mRNA_M-pyrifera_M_contig75963.17922.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp MTAGAHDAGGGFSRSAGTNAARGVMVIVAAVAVGLLLMFRGINDSGDDTAback to top mRNA from alignment at M-pyrifera_M_contig75963:556..1038+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75963.17922.1 ID=mRNA_M-pyrifera_M_contig75963.17922.1|Name=mRNA_M-pyrifera_M_contig75963.17922.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=483bp|location=Sequence derived from alignment at M-pyrifera_M_contig75963:556..1038+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75963:556..1038+ >mRNA_M-pyrifera_M_contig75963.17922.1 ID=mRNA_M-pyrifera_M_contig75963.17922.1|Name=mRNA_M-pyrifera_M_contig75963.17922.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig75963:556..1038+ (Macrocystis pyrifera P11B4 male)back to top |