mRNA_M-pyrifera_M_contig75909.17914.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75909.17914.1
Unique NamemRNA_M-pyrifera_M_contig75909.17914.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A7S3E8D1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8D1_9RHOD)

HSP 1 Score: 129 bits (323), Expect = 6.720e-32
Identity = 73/144 (50.69%), Postives = 92/144 (63.89%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWGDYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKDVASFFDE 438
            LP   D FR+++YW+ FF  R   AFEWYG W +    L    + E +V +VGCGNS LSA LYD GV  + N DFSERVI +M+R+    + GM+WE+ DM  MR   E    +VVVDKGALDALAS+D+  V  +V  FFDE
Sbjct:    7 LPLDKDGFRTRQYWEKFFKNRKS-AFEWYGGWSELRPFLRNEISNEDKVLIVGCGNSDLSANLYDAGVHGITNIDFSERVIRDMRRKCRE-QTGMSWEVMDMTCMR--FESGVFNVVVDKGALDALASSDSDSVLHEVNKFFDE 146          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A836CEF7_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEF7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.430e-30
Identity = 70/137 (51.09%), Postives = 86/137 (62.77%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWGDYGEELLR--LCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVA 411
            LPG   +F SK+YW  FF +R   AFEWYG + D  + L+R  L +  ++V VVGCGNS  SA LYD G   V N DF ERVIA+M R+H   RP M W + DM DMR  + D   D ++DKGA+DAL S DTP  A
Sbjct:    4 LPGKQKDFSSKEYWKTFFEQRS-EAFEWYGNYRDL-QALVRRALGSSNAQVLVVGCGNSSFSADLYDDGFPHVTNVDFEERVIADMSRQHIRRRPLMRWRVMDMTDMR-ALPDASFDAIIDKGAIDALMSEDTPAAA 137          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: W2PRN7_PHYPN (Methyltransf_11 domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2PRN7_PHYPN)

HSP 1 Score: 124 bits (311), Expect = 3.460e-30
Identity = 69/158 (43.67%), Postives = 95/158 (60.13%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWG--------------DYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKDVASFFDE 438
            LP  +++FR ++YWD FF +RG +AFEWYG++               D    LLR    + RV VVGCGNS LSA L   G   + + DFSERVI EM+R++    P + W++ DM DMR  +ED   D+V+DKGALDAL + DTP++ +D +    E
Sbjct:    9 LPRKAEDFRKQEYWDQFFQKRGEKAFEWYGDYASLRPGLQALLGLPDDAPSSLLRRLKAKVRVLVVGCGNSALSADLAADGFSSLLSVDFSERVIDEMRRKY----PALQWQVMDMTDMR-ALEDASFDLVMDKGALDALMAEDTPEIKQDASKMLRE 161          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A5B8MKM0_9CHLO (Methyltransferase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MKM0_9CHLO)

HSP 1 Score: 122 bits (306), Expect = 1.600e-29
Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWGDYGEELLR--LCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDAL 384
            +P    +FR++K+W+ FF+ R G+AFEWYG+W   G  LLR  L   E+R+ V GCGNS LS  LYD G +++ N DFSE  + EM  ++  +RP M W++ DM D+R   ED   DVVVDKG+LDAL
Sbjct:    9 VPDEYSDFRTRKFWEGFFVAREGKAFEWYGDWTTLGP-LLRATLGKPEARILVPGCGNSCLSGDLYDAGFEQIVNVDFSETCVREMLMQNVRSRPKMRWKVMDMTDLRSF-EDGSFDVVVDKGSLDAL 134          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A2R6W4Z1_MARPO (Methyltransf_11 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W4Z1_MARPO)

HSP 1 Score: 120 bits (300), Expect = 1.080e-28
Identity = 62/132 (46.97%), Postives = 78/132 (59.09%), Query Frame = 1
Query:    1 MALPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWGDYGEELLRLC----NEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDAL 384
            + LP    EF + KYWD FF  R G+ FEWYGEW D  +  L  C    + + +V + GCGNS LSA +YD G   + N DFS  VI+EM R+H  +RP M W + DM  M+    D   DVVVDKG LDA+
Sbjct:    6 VPLPKDLKEFSTAKYWDSFFNARRGKPFEWYGEWKDISKLFLAQCGVSTDSKEKVLIPGCGNSTLSADMYDAGFTDITNIDFSRVVISEMLRQHVRSRPRMRWLVMDMTKMQ--FSDSSFDVVVDKGGLDAI 135          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A6A3M939_9STRA (Methyltransferase-like protein 13 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M939_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.970e-28
Identity = 68/151 (45.03%), Postives = 91/151 (60.26%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWG--------------DYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKD 417
            LP  +++FR ++YWD FF +RG +AFEWYG++               D    LLR    + RV VVGCGNS LSA L   G   + + DFS RVI EM+R+    +P + WE+ DM DMR  + D  +D+V+DKGALDAL + DTP V +D
Sbjct:    6 LPRRAEDFRKQEYWDQFFQKRGEKAFEWYGDYASLRPALQALLGLPDDAPASLLRRLKAKLRVLVVGCGNSALSAELAADGFSELLSVDFSARVIDEMRRK----QPALRWEVMDMTDMR-ALGDASVDLVLDKGALDALMAEDTPAVRQD 151          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A1Y1IA33_KLENI (S-adenosyl-L-methionine dependent methyltransferases n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IA33_KLENI)

HSP 1 Score: 119 bits (298), Expect = 2.040e-28
Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWGDYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKDVASFFDE 438
            LP   +EFRS++YWD FF +   +AFEWYGEW +  + ++  C+    + V GCGNS LSA +YD G  RV N DFS+  I EM +++  ARP M W + DM  M+    D   DV++DKG LDAL      + A   A+F  E
Sbjct:   72 LPTKLEEFRSREYWDSFFRKLDKKAFEWYGEWAELRDLVMSACSPGLDILVAGCGNSELSALVYDQGCTRVTNIDFSKVCIVEMLKKNVRARPKMRWLVMDMTKMQ--FPDASFDVIIDKGGLDALTGEPGDEGASAGAAFLKE 213          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: M4BQG5_HYAAE (Methyltransf_11 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BQG5_HYAAE)

HSP 1 Score: 117 bits (294), Expect = 6.820e-28
Identity = 67/158 (42.41%), Postives = 92/158 (58.23%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWG--------------DYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKDVASFFDE 438
            LP  +++FR ++YWD FF +RG +AFEWYG++               D    LLR      RV V+GCGNS LS  L   G   + + DFSERVI EM+R+H    P + W++ DM DMR ++ D+  D+V+DKGALDAL + DT  V +D +    E
Sbjct:    6 LPHKAEDFRKQEYWDTFFKKRGEKAFEWYGDYARLRSALQALLGLPNDAPTSLLRRLKANLRVLVIGCGNSALSNDLAVDGFSNLLSVDFSERVIDEMKRKH----PALQWQVMDMTDMR-MLADNSFDLVMDKGALDALMAEDTAAVKEDASRMLRE 158          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A662XND9_9STRA (Methyltransf_11 domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XND9_9STRA)

HSP 1 Score: 117 bits (294), Expect = 6.850e-28
Identity = 68/151 (45.03%), Postives = 88/151 (58.28%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWG--------------DYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKD 417
            LP  +++FR ++YWD FF +RG RAFEWYG++               D    LLR    + RV VVGCGNS LSA L   G   + + DFSERVI EM+R+H T R    WE+ DM DM    +    D+V+DKGALDAL + DT ++  D
Sbjct:    7 LPRRAEDFRKQEYWDGFFRKRGDRAFEWYGDYATLCGALHALLALPSDAPSSLLRRLTAQVRVLVVGCGNSALSADLAADGFSNLMSVDFSERVIDEMRRKHPTLR----WEVMDMTDMS-AFQPASFDLVLDKGALDALMAEDTVEIKTD 152          
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Match: A0A3M6VVH2_9STRA (Methyltransf_11 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVH2_9STRA)

HSP 1 Score: 117 bits (293), Expect = 9.300e-28
Identity = 67/158 (42.41%), Postives = 91/158 (57.59%), Query Frame = 1
Query:    7 LPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWG--------------DYGEELLRLCNEESRVGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWEISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKDVASFFDE 438
            LP  +++FR ++YWD FF +R  +AFEWYG++               D    LL     + RV VVGCGNS LS  L   G   + + DFS RVI EMQR+H    P M W++ DM DMR + ED   D+V+DKGALDAL + DT ++ +D +   +E
Sbjct:    9 LPQKAEDFRKQEYWDKFFQQRDEKAFEWYGDYALLRPGLQVVLGLPDDAPASLLCRLKAKVRVLVVGCGNSALSGDLVADGFVNLLSVDFSARVIDEMQRKH----PAMQWQVMDMTDMRTL-EDGSFDLVMDKGALDALMAEDTKEIKEDASRMLNE 161          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75909.17914.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3E8D1_9RHOD6.720e-3250.69Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A836CEF7_9STRA1.430e-3051.09Methyltransf_11 domain-containing protein n=1 Tax=... [more]
W2PRN7_PHYPN3.460e-3043.67Methyltransf_11 domain-containing protein n=14 Tax... [more]
A0A5B8MKM0_9CHLO1.600e-2949.22Methyltransferase n=1 Tax=Chloropicon primus TaxID... [more]
A0A2R6W4Z1_MARPO1.080e-2846.97Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A6A3M939_9STRA1.970e-2845.03Methyltransferase-like protein 13 n=5 Tax=Phytopht... [more]
A0A1Y1IA33_KLENI2.040e-2843.75S-adenosyl-L-methionine dependent methyltransferas... [more]
M4BQG5_HYAAE6.820e-2842.41Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A662XND9_9STRA6.850e-2845.03Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A3M6VVH2_9STRA9.300e-2842.41Methyltransf_11 domain-containing protein n=2 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75909contigM-pyrifera_M_contig75909:603..1040 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score137.9
Seed ortholog evalue3.8e-30
Seed eggNOG ortholog2880.D7FQU9
Preferred nameMETTL13
KEGG koko:K08513
KEGG Pathwayko04130,map04130
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2352@1,KOG2352@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons1
Model size438
Cds size438
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816658.3756928-CDS-M-pyrifera_M_contig75909:602..10401622816658.3756928-CDS-M-pyrifera_M_contig75909:602..1040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75909 603..1040 +
1692278103.1012447-CDS-M-pyrifera_M_contig75909:602..10401692278103.1012447-CDS-M-pyrifera_M_contig75909:602..1040Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75909 603..1040 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75909.17914.1prot_M-pyrifera_M_contig75909.17914.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75909 603..1040 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75909.17914.1

>prot_M-pyrifera_M_contig75909.17914.1 ID=prot_M-pyrifera_M_contig75909.17914.1|Name=mRNA_M-pyrifera_M_contig75909.17914.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
MALPGTSDEFRSKKYWDDFFLERGGRAFEWYGEWGDYGEELLRLCNEESR
VGVVGCGNSVLSARLYDGGVKRVRNFDFSERVIAEMQREHETARPGMTWE
ISDMRDMRDIVEDDGLDVVVDKGALDALASADTPDVAKDVASFFDE
back to top

mRNA from alignment at M-pyrifera_M_contig75909:603..1040+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75909.17914.1 ID=mRNA_M-pyrifera_M_contig75909.17914.1|Name=mRNA_M-pyrifera_M_contig75909.17914.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig75909:603..1040+ (Macrocystis pyrifera P11B4 male)
ATGGCCCTTCCTGGAACAAGTGACGAGTTCCGATCAAAGAAATACTGGGA TGACTTCTTTTTGGAGCGTGGAGGACGTGCATTTGAGTGGTATGGGGAGT GGGGAGATTATGGAGAGGAATTGCTCCGGCTTTGCAACGAGGAGAGCCGT GTTGGGGTCGTAGGCTGTGGGAATTCGGTGCTATCTGCTAGACTTTATGA TGGAGGTGTGAAGCGTGTGCGAAATTTTGACTTTAGTGAGCGAGTGATTG CAGAAATGCAGCGCGAACATGAAACGGCACGTCCTGGAATGACTTGGGAG ATTTCAGACATGAGGGACATGAGAGATATAGTAGAGGATGATGGGTTGGA TGTTGTTGTGGATAAAGGTGCGTTGGATGCATTGGCATCTGCTGATACGC CAGATGTAGCAAAAGATGTTGCGTCCTTCTTCGATGAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig75909:603..1040+

>mRNA_M-pyrifera_M_contig75909.17914.1 ID=mRNA_M-pyrifera_M_contig75909.17914.1|Name=mRNA_M-pyrifera_M_contig75909.17914.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig75909:603..1040+ (Macrocystis pyrifera P11B4 male)
ATGGCCCTTCCTGGAACAAGTGACGAGTTCCGATCAAAGAAATACTGGGA
TGACTTCTTTTTGGAGCGTGGAGGACGTGCATTTGAGTGGTATGGGGAGT
GGGGAGATTATGGAGAGGAATTGCTCCGGCTTTGCAACGAGGAGAGCCGT
GTTGGGGTCGTAGGCTGTGGGAATTCGGTGCTATCTGCTAGACTTTATGA
TGGAGGTGTGAAGCGTGTGCGAAATTTTGACTTTAGTGAGCGAGTGATTG
CAGAAATGCAGCGCGAACATGAAACGGCACGTCCTGGAATGACTTGGGAG
ATTTCAGACATGAGGGACATGAGAGATATAGTAGAGGATGATGGGTTGGA
TGTTGTTGTGGATAAAGGTGCGTTGGATGCATTGGCATCTGCTGATACGC
CAGATGTAGCAAAAGATGTTGCGTCCTTCTTCGATGAAATGGCCCTTCCT
GGAACAAGTGACGAGTTCCGATCAAAGAAATACTGGGATGACTTCTTTTT
GGAGCGTGGAGGACGTGCATTTGAGTGGTATGGGGAGTGGGGAGATTATG
GAGAGGAATTGCTCCGGCTTTGCAACGAGGAGAGCCGTGTTGGGGTCGTA
GGCTGTGGGAATTCGGTGCTATCTGCTAGACTTTATGATGGAGGTGTGAA
GCGTGTGCGAAATTTTGACTTTAGTGAGCGAGTGATTGCAGAAATGCAGC
GCGAACATGAAACGGCACGTCCTGGAATGACTTGGGAGATTTCAGACATG
AGGGACATGAGAGATATAGTAGAGGATGATGGGTTGGATGTTGTTGTGGA
TAAAGGTGCGTTGGATGCATTGGCATCTGCTGATACGCCAGATGTAGCAA
AAGATGTTGCGTCCTTCTTCGATGAA
back to top