mRNA_M-pyrifera_M_contig75875.17905.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75875.17905.1
Unique NamemRNA_M-pyrifera_M_contig75875.17905.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A7Y2IT49_9ACTN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y2IT49_9ACTN)

HSP 1 Score: 550 bits (1416), Expect = 3.380e-195
Identity = 278/293 (94.88%), Postives = 289/293 (98.63%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRS 879
            EFDIEDLIDDDPLVFTMSASGYVKTVPA+EFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDE+IQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGM+DILLSSRFGQTIRF ED+VREMGRNAAGVIGLKFKK+GDAVVACDIAREGSTLLHIT KGYGKRTPVDDYPTKGRGGMGVVGIKI +++G VVGTLVVDDDDE+LAMTSAGVLIRTRAEDIS+QGR+
Sbjct:   75 EFDIEDLIDDDPLVFTMSASGYVKTVPADEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEEIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMFDILLSSRFGQTIRFTEDKVREMGRNAAGVIGLKFKKAGDAVVACDIAREGSTLLHITEKGYGKRTPVDDYPTKGRGGMGVVGIKITDDKGPVVGTLVVDDDDEILAMTSAGVLIRTRAEDISQQGRT 367          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A358A6D2_9ACTN (DNA gyrase subunit A (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A6D2_9ACTN)

HSP 1 Score: 525 bits (1353), Expect = 7.930e-186
Identity = 266/318 (83.65%), Postives = 296/318 (93.08%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALVHIDE 954
            EFDIEDLIDDDPLVFTM+A+GYVKT PAEEF+ QGRGGRGIAG KLKDEDT+T +IQT+AHSYL+FFSTRGRVYRLKAH+IPVASR +RGTAIVNLLPLQ+ E IQAIIDTRDYET RYLFFATAKGRVKKTRFNAYDSSL+AGLIAIKLNDDDELVEVIPTNG++DILLSSRFGQTIRFKE QVREMGRNAAGVIGLKFKK+ D +VACDIAR+G TLLHIT +G+GKRT V++YPTKGRGGMGVVGIKI++E+G VVGTLVVDDDDEVLA+T  GV+IRTRA+DIS QGRSASGVKVISP  +D VASIALV +++
Sbjct:   17 EFDIEDLIDDDPLVFTMTATGYVKTTPAEEFRAQGRGGRGIAGAKLKDEDTITQMIQTSAHSYLLFFSTRGRVYRLKAHEIPVASRTSRGTAIVNLLPLQEGEAIQAIIDTRDYETMRYLFFATAKGRVKKTRFNAYDSSLKAGLIAIKLNDDDELVEVIPTNGVFDILLSSRFGQTIRFKESQVREMGRNAAGVIGLKFKKASDELVACDIARDGGTLLHITEQGFGKRTSVNEYPTKGRGGMGVVGIKIVDEKGPVVGTLVVDDDDEVLAVTRQGVMIRTRADDISIQGRSASGVKVISPGDEDQVASIALVSVED 334          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A2E8LCU7_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LCU7_9ACTN)

HSP 1 Score: 531 bits (1368), Expect = 5.720e-181
Identity = 269/326 (82.52%), Postives = 302/326 (92.64%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALVHIDEAVELDTES 978
            EFDIEDLIDDDPLVFTM+A+GYVKT PAEEF+ QGRGGRGIAG KLKDEDT+T +IQT+AHSYL+FFSTRGRVYRLKAH++PVASR +RGTAIVNLLPLQ+ E IQAIIDTRDYET RYLFFATA+GRVKKTRFNAYDSSL+AGLIAIKLNDDDELVEVIPTNG++DILLSSRFGQTIRFKE QVREMGRNAAGVIGLKFKK+ D +VACDIAR+G+TLLHIT +G+GKRT VD+YPTKGRGG GVVGIKI++E+G VVGTLVVDDDDEVLA+T  GV+IRTRA+DIS QGRSASGVKVISPD DD VASIALV +++  EL+ E+
Sbjct:  512 EFDIEDLIDDDPLVFTMTATGYVKTTPAEEFRAQGRGGRGIAGAKLKDEDTITQMIQTSAHSYLLFFSTRGRVYRLKAHEVPVASRTSRGTAIVNLLPLQESETIQAIIDTRDYETMRYLFFATARGRVKKTRFNAYDSSLKAGLIAIKLNDDDELVEVIPTNGVFDILLSSRFGQTIRFKESQVREMGRNAAGVIGLKFKKASDELVACDIARDGATLLHITGQGFGKRTSVDEYPTKGRGGKGVVGIKIVDEKGPVVGTLVVDDDDEVLAVTRQGVMIRTRADDISIQGRSASGVKVISPDDDDEVASIALVSVEDDDELEDEA 837          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A7K1ZBL4_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBL4_9ACTN)

HSP 1 Score: 473 bits (1216), Expect = 3.180e-158
Identity = 242/314 (77.07%), Postives = 274/314 (87.26%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALV 942
            EFDIEDLIDDDPLV TMSA+GYVKTV AEEFKTQGRGGRG+AGTKLKDEDTL HLI TTAHSYL+FFST GRVYRL+AH+IPVASR ARGT+IVNLLPLQ+ E+IQAIIDTR+YET+RYLFFATAKGRVKKTRFNAYDSS RAGLIAI+LNDDDEL EV+PTNG+ DILLSSR GQTIRF+E  VREMGR AAGVIGLKFKK GD VVAC+IA  G +LLH+T  G+GKRTPVD Y  + RGGMGV GIK+ E++G+VVG L+V+D DE+LA+T  GV+IRT  E IS Q R  SGVKV+SPD  D+VAS++LV
Sbjct:  501 EFDIEDLIDDDPLVVTMSAAGYVKTVMAEEFKTQGRGGRGVAGTKLKDEDTLIHLIWTTAHSYLLFFSTHGRVYRLRAHEIPVASRTARGTSIVNLLPLQEGERIQAIIDTRNYETHRYLFFATAKGRVKKTRFNAYDSSRRAGLIAIRLNDDDELAEVVPTNGLDDILLSSRLGQTIRFEESDVREMGRAAAGVIGLKFKKPGDEVVACNIAGGGMSLLHLTANGFGKRTPVDAYRAQRRGGMGVAGIKLTEDKGAVVGALMVEDHDEILAVTVNGVVIRTPVEAISSQSRYGSGVKVMSPDDGDVVASVSLV 814          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A6L7XBY7_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=11 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XBY7_9ACTN)

HSP 1 Score: 440 bits (1131), Expect = 2.100e-145
Identity = 220/314 (70.06%), Postives = 263/314 (83.76%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALV 942
            E DIEDLIDDD LVFTMSASGYVKTVP +EF+ QGRGGRG+AG KLK+ D++ HLI TTAHSYL+FFS RGRVYRLKAH++PVASR ARGT+IVNLL LQD E+IQA+IDTRDYE NRYL FATAKGRVK+T+F AYDSS +AGLIAI+L DDDELV V+PT+G++DILLSSR GQTIRF +D+VREMGR AAGVIGL+ K  GD+VV+C +AR G+ LL++TT GYGKRTPV  +  KGRGG G +G K  EE+G VVGTLVVD  DE+LA+T+ GV+IR    D+SE+ R ASGV+V++PD  D V ++ALV
Sbjct:  510 ELDIEDLIDDDDLVFTMSASGYVKTVPTDEFRLQGRGGRGVAGAKLKEADSVMHLIHTTAHSYLLFFSNRGRVYRLKAHEVPVASRTARGTSIVNLLSLQDGERIQAVIDTRDYEMNRYLLFATAKGRVKRTKFTAYDSSRKAGLIAIRLRDDDELVAVVPTDGVHDILLSSRLGQTIRFAQDEVREMGRTAAGVIGLRLKHKGDSVVSCAVARPGAALLYVTTGGYGKRTPVAAFNCKGRGGQGNIGSKPTEEKGEVVGTLVVDSGDEILAVTANGVVIRVPVGDVSERSRMASGVRVMNPDPGDEVVAVALV 823          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A6B1E5R9_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E5R9_9ACTN)

HSP 1 Score: 439 bits (1128), Expect = 4.660e-145
Identity = 222/314 (70.70%), Postives = 261/314 (83.12%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALV 942
            E DIEDLIDDD LVFTMSASGYVKTV  +EF+ QGRGGRG+AG KLK+ D++THLI TTAHSYL+FFS RGRVYRLKAH+IPVA R ARGT+IVNLL LQD E+IQA+IDTRDYETNRYLFFAT  G+VK+T+  AYDSS +AGLIAI L D DELV V+PT+G++DILLSSR GQT RF +DQVREMGR AAGVIGLKFK  GDAVV+C +AR  STLLH+TT GYGKRTPV+++  KGR   GV+GI++ ++RG+VVGTLVVD  DE+LA+T  GV+IR    DIS +GR   GVKV+SPD DD V ++ALV
Sbjct:  507 ELDIEDLIDDDDLVFTMSASGYVKTVAVDEFRVQGRGGRGVAGAKLKEADSVTHLIHTTAHSYLLFFSNRGRVYRLKAHEIPVAKRTARGTSIVNLLSLQDGERIQAVIDTRDYETNRYLFFATKNGQVKRTKLTAYDSSRKAGLIAIHLRDGDELVAVVPTDGVHDILLSSRRGQTARFAQDQVREMGRVAAGVIGLKFKHRGDAVVSCALARPDSTLLHVTTLGYGKRTPVEEFTCKGRSAQGVMGIRLTKDRGAVVGTLVVDPGDEILAVTREGVVIRVPVSDISVRGRLGMGVKVMSPDPDDEVVAVALV 820          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A3M2GH10_ACTSX (DNA gyrase subunit A n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GH10_ACTSX)

HSP 1 Score: 429 bits (1104), Expect = 3.600e-141
Identity = 212/318 (66.67%), Postives = 264/318 (83.02%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALVHIDE 954
            E DIEDLIDD+ +VFTMSASGYVKTVPA+ F+TQGRGGRG+AG  LKD+D++ HLI TTAHSYL+FFS RGRVYRLKAH++P++SR ARGTAIVNLLPLQ DE I+A+IDTRDYE+ R+LFFATA+GRVKKT F AYDSSLRAG+IAI+LNDDDELV V+P +   DILLSSR GQTIRF E +VR MGR+AAGV+G++FK  GD VVAC +AR+ + LLH+T  GYGKRT V ++P K RGGMGVVGIK++ +RG VVG + V++ DE+L  + +GV+IR    D+S QGRSA+GV++++ D DD VA +AL+  D+
Sbjct:  508 EIDIEDLIDDEDVVFTMSASGYVKTVPADAFRTQGRGGRGVAGASLKDDDSIVHLISTTAHSYLLFFSNRGRVYRLKAHEVPMSSRTARGTAIVNLLPLQPDETIEAVIDTRDYESYRFLFFATARGRVKKTAFTAYDSSLRAGIIAIRLNDDDELVAVVPADEGDDILLSSRLGQTIRFAESEVRAMGRSAAGVVGMRFKHEGDRVVACAVARQDAELLHVTEGGYGKRTRVSEFPVKHRGGMGVVGIKLVPDRGEVVGAVQVEEGDEILLASESGVVIRVPVADVSVQGRSATGVRIMNLDPDDKVAVVALLARDD 825          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A538DEP7_9ACTN (DNA gyrase subunit A n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DEP7_9ACTN)

HSP 1 Score: 406 bits (1043), Expect = 1.000e-132
Identity = 204/314 (64.97%), Postives = 252/314 (80.25%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALV 942
            E DIEDLI+D+ LVFTMS++GYVKTV AEEF+TQ RGGRG+ G  LKDED +T +I T+AH+YL+FFS  GRVYRLKAH+IP+ SR ARGTAIVNLLPLQ  E++QAIIDTRDYET+RYLFFAT KGRVKKTRFN YDSSLRAG+IAI+LND DELV VIPTNG  D+ +SSR GQTIRF E  VR MGR AAGV G++F+ S D +V+CD+ REG+  LHIT+ G+GKRTP+D +P +GRGG+GV GI+I E+RGSV    +V DDD++  + S G++IR  A DIS QGR A+GV++++ +    VA+ A V
Sbjct:  483 EIDIEDLIEDEDLVFTMSSAGYVKTVKAEEFRTQSRGGRGVTGAALKDEDYITKVIHTSAHAYLLFFSNLGRVYRLKAHEIPITSRTARGTAIVNLLPLQGHERVQAIIDTRDYETSRYLFFATKKGRVKKTRFNEYDSSLRAGIIAIRLNDGDELVAVIPTNGSDDMFMSSRSGQTIRFPESDVRPMGRTAAGVAGMRFR-SDDDLVSCDVGREGAMHLHITSAGFGKRTPLDRFPRRGRGGLGVRGIRITEQRGSVAAAFLVGDDDDLFVIASGGIIIRMAAADISVQGRDATGVRIMNLEPGHYVAAAAPV 795          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A2E5P0A0_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=root TaxID=1 RepID=A0A2E5P0A0_9ACTN)

HSP 1 Score: 401 bits (1030), Expect = 1.470e-130
Identity = 195/302 (64.57%), Postives = 251/302 (83.11%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISP 906
            E DIEDLIDD+ LVF MSA+GYVKT+    F+TQGRGG+GI G KLKDED ++HLI TTAH+YL+FFSTRGRVYRLKAH++P A R ARGT+I+NLLPLQ DE+IQA+IDTRDYE+NR+LFFAT  GRVKKTRF AYDSSL+AGLIA++LND DELV V+PT+G  D+ L SR GQT+R  E+ VR MGR+AAGV+G+KF+   D +V+C +AR+ +T+LH+TT+GYGK T +D++ TKGR G+GV GI+I ++RGSV G L+V + D++ A+T+AG++IR  A +IS QGR A+GV+V+SP
Sbjct:  503 ELDIEDLIDDEELVFAMSAAGYVKTMSTSVFRTQGRGGKGITGAKLKDEDAVSHLIHTTAHAYLLFFSTRGRVYRLKAHEVPTAGRTARGTSIMNLLPLQPDERIQAVIDTRDYESNRFLFFATRSGRVKKTRFTAYDSSLKAGLIAVRLNDGDELVAVVPTSGSDDLFLVSRTGQTLRIDENDVRAMGRDAAGVVGMKFR-GDDELVSCCVARKDATILHLTTEGYGKCTALDEFGTKGRAGLGVRGIRITDDRGSVAGALIVGEGDDLFAVTTAGMIIRMPAAEISVQGRDATGVRVVSP 803          
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Match: A0A2E6XUB0_9ACTN (DNA topoisomerase (ATP-hydrolyzing) n=6 Tax=Actinobacteria TaxID=201174 RepID=A0A2E6XUB0_9ACTN)

HSP 1 Score: 396 bits (1017), Expect = 1.490e-128
Identity = 196/314 (62.42%), Postives = 251/314 (79.94%), Query Frame = 1
Query:    1 EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDEDTLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQDDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKLNDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKFKKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIKIMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVISPDADDLVASIALV 942
            E DIEDLIDD+ +VF MS+SGYVKT+   EF+TQGRGG+G+ G +LK+ED ++HLI TTAH+YL+FFSTRGRVYRLK H+IP+A R ARGT+IVNLLPLQ DE+IQA++DTRDYET+RYLFFAT  GRVKKT F AYDSSL+AGLIA+KLND DELV V+PT+G  D+LL SR GQT+R  ED VR MGR+AAGV G+ F+   D +V+C + R G+T+ H+TTKG+GKRT + ++  KGRGG+GV GI+  ++RG V G LVVD+ D+V A+T+ G++IR    DIS QGR A+GV V+SP   + VA+++ V
Sbjct:  509 ELDIEDLIDDEEMVFAMSSSGYVKTMSVTEFRTQGRGGKGVTGARLKEEDAVSHLIHTTAHAYLLFFSTRGRVYRLKTHEIPMAGRTARGTSIVNLLPLQPDERIQAVVDTRDYETHRYLFFATRSGRVKKTLFTAYDSSLKAGLIAVKLNDGDELVAVVPTSGEDDLLLVSRSGQTLRVGEDDVRAMGRDAAGVKGMGFR-GDDELVSCAVVRPGATVFHLTTKGFGKRTDIGEFTRKGRGGLGVRGIRTTDDRGQVAGALVVDEADDVFAITTGGMIIRMPVADISVQGRGATGVAVMSPGEGNEVAAVSPV 821          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75875.17905.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IT49_9ACTN3.380e-19594.88DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A358A6D2_9ACTN7.930e-18683.65DNA gyrase subunit A (Fragment) n=1 Tax=Acidimicro... [more]
A0A2E8LCU7_9ACTN5.720e-18182.52DNA topoisomerase (ATP-hydrolyzing) n=8 Tax=Acidim... [more]
A0A7K1ZBL4_9ACTN3.180e-15877.07DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Acidim... [more]
A0A6L7XBY7_9ACTN2.100e-14570.06DNA topoisomerase (ATP-hydrolyzing) n=11 Tax=Acidi... [more]
A0A6B1E5R9_9ACTN4.660e-14570.70DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Acidim... [more]
A0A3M2GH10_ACTSX3.600e-14166.67DNA gyrase subunit A n=1 Tax=Actinomyces sp. TaxID... [more]
A0A538DEP7_9ACTN1.000e-13264.97DNA gyrase subunit A n=1 Tax=Actinomycetia bacteri... [more]
A0A2E5P0A0_9ACTN1.470e-13064.57DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=root T... [more]
A0A2E6XUB0_9ACTN1.490e-12862.42DNA topoisomerase (ATP-hydrolyzing) n=6 Tax=Actino... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75875contigM-pyrifera_M_contig75875:3..1013 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score337.0
Seed ortholog evalue9.9e-90
Seed eggNOG ortholog1313172.YM304_00070
Preferred namegyrA
KEGG koko:K02469
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0030312,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034335,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0046872,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363
EggNOG free text desc.DNA Topoisomerase IV
EggNOG OGs2GJ2Q@201174,4CMSQ@84992,COG0188@1,COG0188@2
EC5.99.1.3
COG Functional cat.L
Best tax levelAcidimicrobiia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons1
Model size1011
Cds size1011
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816657.6758277-CDS-M-pyrifera_M_contig75875:2..10131622816657.6758277-CDS-M-pyrifera_M_contig75875:2..1013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75875 3..1013 +
1692278102.6303155-CDS-M-pyrifera_M_contig75875:2..10131692278102.6303155-CDS-M-pyrifera_M_contig75875:2..1013Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75875 3..1013 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75875.17905.1prot_M-pyrifera_M_contig75875.17905.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75875 3..1013 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75875.17905.1

>prot_M-pyrifera_M_contig75875.17905.1 ID=prot_M-pyrifera_M_contig75875.17905.1|Name=mRNA_M-pyrifera_M_contig75875.17905.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=337bp
EFDIEDLIDDDPLVFTMSASGYVKTVPAEEFKTQGRGGRGIAGTKLKDED
TLTHLIQTTAHSYLMFFSTRGRVYRLKAHQIPVASRQARGTAIVNLLPLQ
DDEQIQAIIDTRDYETNRYLFFATAKGRVKKTRFNAYDSSLRAGLIAIKL
NDDDELVEVIPTNGMYDILLSSRFGQTIRFKEDQVREMGRNAAGVIGLKF
KKSGDAVVACDIAREGSTLLHITTKGYGKRTPVDDYPTKGRGGMGVVGIK
IMEERGSVVGTLVVDDDDEVLAMTSAGVLIRTRAEDISEQGRSASGVKVI
SPDADDLVASIALVHIDEAVELDTESDTEPDTESDTE
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mRNA from alignment at M-pyrifera_M_contig75875:3..1013+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75875.17905.1 ID=mRNA_M-pyrifera_M_contig75875.17905.1|Name=mRNA_M-pyrifera_M_contig75875.17905.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1011bp|location=Sequence derived from alignment at M-pyrifera_M_contig75875:3..1013+ (Macrocystis pyrifera P11B4 male)
GAGTTCGACATCGAAGATCTGATCGACGACGACCCGCTGGTCTTCACCAT GTCGGCGTCGGGCTATGTCAAGACCGTGCCGGCCGAGGAGTTCAAGACCC AGGGCCGTGGTGGCCGTGGCATCGCCGGCACCAAGCTCAAGGACGAGGAC ACCCTCACCCACCTCATCCAGACGACGGCCCACTCGTACCTGATGTTCTT CTCGACGCGCGGTCGGGTGTATCGCCTCAAGGCCCACCAGATCCCGGTTG CGTCGCGCCAGGCCCGGGGGACAGCCATTGTCAACCTGTTGCCGTTGCAG GACGACGAGCAGATCCAGGCGATCATCGATACCCGCGACTACGAGACCAA TCGCTATCTGTTCTTCGCCACAGCCAAGGGCCGGGTCAAGAAGACGCGCT TCAACGCCTACGACTCTTCGCTGCGCGCCGGGCTCATCGCCATCAAGCTC AACGACGACGATGAGCTGGTCGAGGTGATTCCCACCAACGGCATGTACGA CATCTTGTTGTCGTCGCGGTTCGGCCAGACCATCCGGTTCAAGGAAGACC AGGTCCGAGAGATGGGTCGCAACGCGGCCGGTGTGATCGGGCTCAAGTTC AAGAAGAGCGGCGACGCCGTCGTGGCGTGCGACATCGCGCGCGAAGGGTC GACCCTCCTCCACATCACCACCAAGGGCTATGGCAAGCGCACGCCGGTCG ACGACTATCCCACCAAGGGTCGCGGCGGCATGGGCGTGGTCGGCATCAAG ATCATGGAAGAGCGGGGCTCGGTCGTCGGCACCCTGGTCGTCGACGACGA CGACGAGGTCCTGGCGATGACGTCGGCCGGTGTGCTGATCCGCACCCGCG CCGAAGACATCTCCGAGCAGGGACGATCCGCGAGCGGCGTCAAGGTCATC AGCCCCGACGCCGACGATCTGGTCGCCTCGATCGCCCTGGTCCACATCGA CGAGGCTGTGGAACTCGACACCGAGTCTGACACTGAGCCCGACACTGAGT CCGACACCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75875:3..1013+

>mRNA_M-pyrifera_M_contig75875.17905.1 ID=mRNA_M-pyrifera_M_contig75875.17905.1|Name=mRNA_M-pyrifera_M_contig75875.17905.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2022bp|location=Sequence derived from alignment at M-pyrifera_M_contig75875:3..1013+ (Macrocystis pyrifera P11B4 male)
GAGTTCGACATCGAAGATCTGATCGACGACGACCCGCTGGTCTTCACCAT
GTCGGCGTCGGGCTATGTCAAGACCGTGCCGGCCGAGGAGTTCAAGACCC
AGGGCCGTGGTGGCCGTGGCATCGCCGGCACCAAGCTCAAGGACGAGGAC
ACCCTCACCCACCTCATCCAGACGACGGCCCACTCGTACCTGATGTTCTT
CTCGACGCGCGGTCGGGTGTATCGCCTCAAGGCCCACCAGATCCCGGTTG
CGTCGCGCCAGGCCCGGGGGACAGCCATTGTCAACCTGTTGCCGTTGCAG
GACGACGAGCAGATCCAGGCGATCATCGATACCCGCGACTACGAGACCAA
TCGCTATCTGTTCTTCGCCACAGCCAAGGGCCGGGTCAAGAAGACGCGCT
TCAACGCCTACGACTCTTCGCTGCGCGCCGGGCTCATCGCCATCAAGCTC
AACGACGACGATGAGCTGGTCGAGGTGATTCCCACCAACGGCATGTACGA
CATCTTGTTGTCGTCGCGGTTCGGCCAGACCATCCGGTTCAAGGAAGACC
AGGTCCGAGAGATGGGTCGCAACGCGGCCGGTGTGATCGGGCTCAAGTTC
AAGAAGAGCGGCGACGCCGTCGTGGCGTGCGACATCGCGCGCGAAGGGTC
GACCCTCCTCCACATCACCACCAAGGGCTATGGCAAGCGCACGCCGGTCG
ACGACTATCCCACCAAGGGTCGCGGCGGCATGGGCGTGGTCGGCATCAAG
ATCATGGAAGAGCGGGGCTCGGTCGTCGGCACCCTGGTCGTCGACGACGA
CGACGAGGTCCTGGCGATGACGTCGGCCGGTGTGCTGATCCGCACCCGCG
CCGAAGACATCTCCGAGCAGGGACGATCCGCGAGCGGCGTCAAGGTCATC
AGCCCCGACGCCGACGATCTGGTCGCCTCGATCGCCCTGGTCCACATCGA
CGAGGCTGTGGAACTCGACACCGAGTCTGACACTGAGCCCGACACTGAGT
CCGACACCGAGGAGTTCGACATCGAAGATCTGATCGACGACGACCCGCTG
GTCTTCACCATGTCGGCGTCGGGCTATGTCAAGACCGTGCCGGCCGAGGA
GTTCAAGACCCAGGGCCGTGGTGGCCGTGGCATCGCCGGCACCAAGCTCA
AGGACGAGGACACCCTCACCCACCTCATCCAGACGACGGCCCACTCGTAC
CTGATGTTCTTCTCGACGCGCGGTCGGGTGTATCGCCTCAAGGCCCACCA
GATCCCGGTTGCGTCGCGCCAGGCCCGGGGGACAGCCATTGTCAACCTGT
TGCCGTTGCAGGACGACGAGCAGATCCAGGCGATCATCGATACCCGCGAC
TACGAGACCAATCGCTATCTGTTCTTCGCCACAGCCAAGGGCCGGGTCAA
GAAGACGCGCTTCAACGCCTACGACTCTTCGCTGCGCGCCGGGCTCATCG
CCATCAAGCTCAACGACGACGATGAGCTGGTCGAGGTGATTCCCACCAAC
GGCATGTACGACATCTTGTTGTCGTCGCGGTTCGGCCAGACCATCCGGTT
CAAGGAAGACCAGGTCCGAGAGATGGGTCGCAACGCGGCCGGTGTGATCG
GGCTCAAGTTCAAGAAGAGCGGCGACGCCGTCGTGGCGTGCGACATCGCG
CGCGAAGGGTCGACCCTCCTCCACATCACCACCAAGGGCTATGGCAAGCG
CACGCCGGTCGACGACTATCCCACCAAGGGTCGCGGCGGCATGGGCGTGG
TCGGCATCAAGATCATGGAAGAGCGGGGCTCGGTCGTCGGCACCCTGGTC
GTCGACGACGACGACGAGGTCCTGGCGATGACGTCGGCCGGTGTGCTGAT
CCGCACCCGCGCCGAAGACATCTCCGAGCAGGGACGATCCGCGAGCGGCG
TCAAGGTCATCAGCCCCGACGCCGACGATCTGGTCGCCTCGATCGCCCTG
GTCCACATCGACGAGGCTGTGGAACTCGACACCGAGTCTGACACTGAGCC
CGACACTGAGTCCGACACCGAG
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