mRNA_M-pyrifera_M_contig75818.17884.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: A0A7S3W2M8_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W2M8_EMIHU) HSP 1 Score: 103 bits (256), Expect = 2.610e-21 Identity = 91/268 (33.96%), Postives = 137/268 (51.12%), Query Frame = 1 Query: 10 VNALVAFIQVGVGADNLIIIVDFFQRSNPLHSLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLR---------RSEKHKDQERYEQKTAGEETRRVTGWIGQG----VTFRPAAVFVIVAFLVLVVLGL-VSLEEIPVGLEPEEVLPDDS-YVSEWLEVQDEHFGAMVSFMQVVLRDFHPGSSSQRSKVGDLVDLLEAHPKVFPPIVS--WVAELEA 762 ++ L+ F+ VGVG D++I++VDF QR P S+ +R+S + AG A+ LTSL+ ++AF A+ PGV+ F + A + F +LL TLF LL DERRR A R CL C+ +E + + K A R + V +P A+ VI+AF L+ LG ++ IP+G E PD S YV+ + Q E+F A+ + +VLRD +S ++ V L+ LE+ V P + W+A A Sbjct: 341 ISLLMVFVIVGVGVDDVIVVVDFLQRQPPHLSIVERISGALGGAGPAIQLTSLTNLIAFLIAATVDFPGVSYFCLSAGFTLFALFLLTTTLFTALLTFDERRRGAMRLDCLCCIGFGAGDSETGDAEPSSPSHKEDDKRAHSGLRAAVSSAARAYDCFVASKPVALVVILAFTSLIPLGFGFAIGNIPLGAELASYFPDGSPYVAYTADTQ-ENFVALDTPGYLVLRDVKWEDASAQTAVDSLLAALESDDFVIAPYSTNNWLAAYRA 607
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: A0A7D9L4U5_PARCT (Patched domain-containing 3-like (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L4U5_PARCT) HSP 1 Score: 92.4 bits (228), Expect = 1.240e-17 Identity = 67/255 (26.27%), Postives = 126/255 (49.41%), Query Frame = 1 Query: 1 FNSVNALVAFIQVGVGADNLIIIVDFFQRSNPLHSLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQERYEQKTAGEETRRVTGWIGQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDEHFGAMVSFMQVVLRDFHPGSSSQRSKVGDLVDLLEAHPKVFPPIVSWVAELEAY 765 F S+ A++ F+ VGVG D++ IIVD R++ ++P R+S M G AV++T+++ ++AFA G SS P + F AA S +L VT+F ++ D RR A R + CL R+++ + + W G+ + P + V++ + L+ LG+ + + ++ D S +L+ +++F V ++ D + + + K+ +L ++E + P + SW AEL+ + Sbjct: 320 FVSITAILPFLIVGVGIDDMFIIVDQLDRTHSDQTIPKRLSTVMRIVGPAVTMTTMTDLLAFAVGTSSKFPSIVYFCTYAALSIAFAFLFLVTIFVAFMSYDCRRMNAGRRDMVPCLEAPPPRPGAPRWDEPRPQTSNKIMEVW-GRFLMKTPTKIVVVIVSICLLALGIYGTTFVNEEFDRRDLAKDGSEFIRFLDALEDYFTGDVQVDLILEADVNYSDPATKMKINNLSQIIEDNEFYRPTVRSWYAELQRW 573
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: A0A1Z5JYE4_FISSO (SSD domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JYE4_FISSO) HSP 1 Score: 89.4 bits (220), Expect = 1.470e-16 Identity = 78/266 (29.32%), Postives = 127/266 (47.74%), Query Frame = 1 Query: 1 FNSVNALVAFIQVGVGADNLIIIVDFFQRSNPL-------HSLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQER--YEQKTAGEETRRVTGWIGQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDEHFGAMVSFMQVVLRDFHPGSS--SQRSKVGDLVDLLEAHPKVFPPIVSWVAELEAY 765 F V+ L+ FI +G+G D+ +IV+ F R + L R + ++A AGT++++TS + +VAFA ++S LP ++SF AA + F + T F L LDERR+ NR CL C R +D E +E+ +R + + R V V++ F L+ G+ + V +P+ SY+ ++ DE F + + V F GS + R+++ DL L ++ P I V+E EAY Sbjct: 330 FGPVHNLLPFILLGIGVDDAFVIVNAFNRERKVARSAESNEDLATRSARSLARAGTSITVTSATDLVAFAISSASALPALSSFCAYAAVAIFFLWFFSATFFTACLVLDERRQRDNRRECLVCCTRKNPMEDDEGDVFEEDLV---SRYFRNYHAPAILSRAGKVIVLLFFSGLIAFGVYGAMNLSVEDSTRSFIPEGSYLQDYFAASDEFFPSKGIDLYFV---FERGSDIYASRTELADLESRLSGLSEMPPYIAEPVSE-EAY 588
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: A0A096P8T2_OSTTA (Sterol-sensing domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P8T2_OSTTA) HSP 1 Score: 86.7 bits (213), Expect = 1.220e-15 Identity = 62/211 (29.38%), Postives = 108/211 (51.18%), Query Frame = 1 Query: 1 FNSVNALVAFIQVGVGADNLIIIVDFFQRSNPLHSLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANR---HACLFCLRRS-----EKHKDQERYEQKTAGEETRRVTGWIGQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDEHF 609 F+ + ++ F+ +GVG D++ +IV+ + +RM T+ +AG +V++TS++ V+AF G+S+ LP + +F AA F +Y QVT F +ALDERR+ + CL C + + HK Q+ Q+ G+ IG + +FV+ F + + G++ +I V + +PDDSY+ W +D +F Sbjct: 368 FSPLMNVLPFLLLGVGVDDMFVIVNAYDNVEARVDPVERMGRTLRYAGMSVTVTSITDVIAFLIGSSTSLPALKNFCYYAALGIFFDYFYQVTFFTACVALDERRKAKRQGDVFCCLSCPAEACCTCCQPHKTQKSMLQRLLGQT-------IGTRLGNLKVKIFVVTFFSAMTIGGIIGATKIKVDADVNNFIPDDSYLKLWFADRDAYF 571
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: UPI001425BB54 (patched domain-containing protein 3-like isoform X1 n=3 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425BB54) HSP 1 Score: 86.7 bits (213), Expect = 1.220e-15 Identity = 67/229 (29.26%), Postives = 120/229 (52.40%), Query Frame = 1 Query: 1 FNSVNALVAFIQVGVGADNLIIIVDFFQRSNPLHSLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQER-YEQKTAGEETRRVT-------GWIGQ-------GVTFRPAA-VFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDEHFGAMVSFMQVV 639 FN + ++ F+ +G+G D++ I++ ++++NP S+ +RM + A ++++TSL+ ++AF+ GA +PLP + F + + +Y+ Q+T F + L RR ANRH C C + K + + R Y+ AG T T W+ Q +PA + V++AF V + L + ++ GLE +++ DDSY E ++DEHF +Q+V Sbjct: 318 FNQIVSVTPFLAIGIGLDDMFIMLAAWRQTNPKLSVEERMGLAYSEAAVSITITSLTDILAFSIGAYNPLPAIQIFCLYTGVAIAFDYIYQITFFGACMVLIGRREAANRH-CYTCKKVLPKKEAKSRLYKIFCAGGFTESDTISKNENEPWLMQFFKNYYGPFIMKPAVKILVLIAFAVYIGLAVWGCTQLREGLELKKLAADDSYAFEAFTLEDEHFNEFGPPVQIV 545
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: UPI0006150EE1 (protein still life, isoforms C/SIF type 2 isoform X3 n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI0006150EE1) HSP 1 Score: 85.5 bits (210), Expect = 3.480e-15 Identity = 74/231 (32.03%), Postives = 121/231 (52.38%), Query Frame = 1 Query: 19 LVAFIQVGVGADNLIIIVDFFQRSNPLH---SLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQERYEQKTAGEETRRVTGWIGQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDE--HFGAMVSFMQVVLRDFHPGSSSQRSKVGDLV 696 ++ F+ + VG DN+ I+V +R NP S+PD + MA G ++ LTS S + F G S +P V +FS+ A+ S F+N+LLQ+T F L+ALDE+R N + LFC ++ K Q+ E + G + + P + V+V F V +V LV + I +GL+ + +P+DSYV ++ + ++ GA V F+ PG + R V +++ Sbjct: 1816 VIPFLVLAVGVDNIFILVQTHER-NPKRAQESIPDHIGRIMAKVGPSMLLTSTSECLCFLIGTLSSMPAVNTFSLYASLSIFINFLLQMTAFVSLMALDEQR-FENNLSDLFCCVKTNK---QDTTEDEDFGLVHAIFQRFYTPCLMKTPVRITVLVVFFVALVAHLVLVPNISIGLDQKLSMPEDSYVLKYFQFMEDLLSMGAPVYFVVT------PGLNYSRRNVQNVI 2035
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: UPI000614EDB6 (protein still life, isoform SIF type 1 isoform X2 n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI000614EDB6) HSP 1 Score: 85.5 bits (210), Expect = 3.550e-15 Identity = 74/231 (32.03%), Postives = 121/231 (52.38%), Query Frame = 1 Query: 19 LVAFIQVGVGADNLIIIVDFFQRSNPLH---SLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQERYEQKTAGEETRRVTGWIGQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDE--HFGAMVSFMQVVLRDFHPGSSSQRSKVGDLV 696 ++ F+ + VG DN+ I+V +R NP S+PD + MA G ++ LTS S + F G S +P V +FS+ A+ S F+N+LLQ+T F L+ALDE+R N + LFC ++ K Q+ E + G + + P + V+V F V +V LV + I +GL+ + +P+DSYV ++ + ++ GA V F+ PG + R V +++ Sbjct: 2616 VIPFLVLAVGVDNIFILVQTHER-NPKRAQESIPDHIGRIMAKVGPSMLLTSTSECLCFLIGTLSSMPAVNTFSLYASLSIFINFLLQMTAFVSLMALDEQR-FENNLSDLFCCVKTNK---QDTTEDEDFGLVHAIFQRFYTPCLMKTPVRITVLVVFFVALVAHLVLVPNISIGLDQKLSMPEDSYVLKYFQFMEDLLSMGAPVYFVVT------PGLNYSRRNVQNVI 2835
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: UPI0006151F12 (protein still life, isoform SIF type 1 isoform X1 n=1 Tax=Megachile rotundata TaxID=143995 RepID=UPI0006151F12) HSP 1 Score: 85.5 bits (210), Expect = 3.550e-15 Identity = 74/231 (32.03%), Postives = 121/231 (52.38%), Query Frame = 1 Query: 19 LVAFIQVGVGADNLIIIVDFFQRSNPLH---SLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQERYEQKTAGEETRRVTGWIGQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDE--HFGAMVSFMQVVLRDFHPGSSSQRSKVGDLV 696 ++ F+ + VG DN+ I+V +R NP S+PD + MA G ++ LTS S + F G S +P V +FS+ A+ S F+N+LLQ+T F L+ALDE+R N + LFC ++ K Q+ E + G + + P + V+V F V +V LV + I +GL+ + +P+DSYV ++ + ++ GA V F+ PG + R V +++ Sbjct: 2617 VIPFLVLAVGVDNIFILVQTHER-NPKRAQESIPDHIGRIMAKVGPSMLLTSTSECLCFLIGTLSSMPAVNTFSLYASLSIFINFLLQMTAFVSLMALDEQR-FENNLSDLFCCVKTNK---QDTTEDEDFGLVHAIFQRFYTPCLMKTPVRITVLVVFFVALVAHLVLVPNISIGLDQKLSMPEDSYVLKYFQFMEDLLSMGAPVYFVVT------PGLNYSRRNVQNVI 2836
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: A0A6P8GW09_CLUHA (patched domain-containing protein 3 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P8GW09_CLUHA) HSP 1 Score: 85.1 bits (209), Expect = 4.010e-15 Identity = 62/221 (28.05%), Postives = 113/221 (51.13%), Query Frame = 1 Query: 28 FIQVGVGADNLIIIVDFFQRSNPLHSLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQER----------YEQKTAGEETRRVTGWI----GQGVTFRPAAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDEHFGAMVSFMQVVLRD 648 F+ +G+G DN+ I++ +QR+ + DRM+ET A ++++T+L+ +AF G +P V SF + + Y+ +T F LAL+ +R +NRH F R + D+++ Y+ T EE ++ + G +T R VFVI+ + V V + + ++ VG++ E V DDSY+ + + +D +F F+ V+++D Sbjct: 320 FLILGIGVDNMFIMIKCWQRTKVHDKVEDRMAETYKEAAVSITITTLTDALAFYIGLLTPFRSVQSFCMYTGTAILFCYIYNITFFGAFLALNGQRERSNRHWLTF---RKVEIPDKDKKSNACSVGGAYDPDTGAEEDTPISVFFKKHYGPFLTKRWTKVFVILLYFVYVCVSIYGCSQMKVGIDLENVAADDSYIVNYYDNEDHYFREYGPFVMVIVKD 537
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Match: A0A2G9UUT4_TELCI (Patched family protein n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9UUT4_TELCI) HSP 1 Score: 84.3 bits (207), Expect = 6.510e-15 Identity = 63/203 (31.03%), Postives = 112/203 (55.17%), Query Frame = 1 Query: 43 VGADNLIIIVDFFQRSNPLH-SLPDRMSETMAHAGTAVSLTSLSTVVAFAAGASSPLPGVASFSVLAAASFFLNYLLQVTLFPVLLALDERRRLANRHACLFCLRRSEKHKDQERYEQKTAGEETRRVTGWIG---QGVTFRP-AAVFVIVAFLVLVVLGLVSLEEIPVGLEPEEVLPDDSYVSEWLEVQDEHFGAMVSFMQV 636 VG DN+ I++ + RS+P H SL RM ET A AG ++++TSL+ ++FA G ++P P V F A + Y+ Q+T F ++ RR + NR+ F R+ +K + + YE ++ E+ ++ + + P V +I+AFL+ + + + E+ +GLEP ++LPD+SY + L + +++F S + V Sbjct: 17 VGVDNVFILLSAW-RSSPTHQSLQKRMEETFADAGVSITVTSLTDFISFAVGCATPFPSVQMFCAYAVTAVMFTYVYQLTFFAGIMVYTNRREMDNRNCITF--RKIKKEESKSAYEDRSF-EKNHLLSQFFRTTYSDMLLNPFVRVLIIIAFLIYLGVAMWGCTEVKLGLEPNDLLPDNSYGKQTLRLAEKYFADYGSNLHV 215 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75818.17884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75818.17884.1 >prot_M-pyrifera_M_contig75818.17884.1 ID=prot_M-pyrifera_M_contig75818.17884.1|Name=mRNA_M-pyrifera_M_contig75818.17884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=255bp FNSVNALVAFIQVGVGADNLIIIVDFFQRSNPLHSLPDRMSETMAHAGTAback to top mRNA from alignment at M-pyrifera_M_contig75818:1..897+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75818.17884.1 ID=mRNA_M-pyrifera_M_contig75818.17884.1|Name=mRNA_M-pyrifera_M_contig75818.17884.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=897bp|location=Sequence derived from alignment at M-pyrifera_M_contig75818:1..897+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75818:1..897+ >mRNA_M-pyrifera_M_contig75818.17884.1 ID=mRNA_M-pyrifera_M_contig75818.17884.1|Name=mRNA_M-pyrifera_M_contig75818.17884.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1530bp|location=Sequence derived from alignment at M-pyrifera_M_contig75818:1..897+ (Macrocystis pyrifera P11B4 male)back to top |