mRNA_M-pyrifera_M_contig75809.17881.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7Y2DNM7_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DNM7_9ACTN) HSP 1 Score: 371 bits (953), Expect = 1.060e-124 Identity = 187/250 (74.80%), Postives = 212/250 (84.80%), Query Frame = 1 Query: 10 VRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVL 759 VR+RP F +LLR++ V GIRRVRYTSPHPKDMT +V+ AMAETP V+PHLHFPLQSGSDRIL AMHRGYTA+R+L KLA AR+ IPDLAV+TDIIVGFPGETD DFERTLEVAAAAE+DSA+TFVYSPRPGTEAAE+VDDFCDP VVK+RY LRTV ERSALAK+ RIG +EEVIVEGPSKKDP+ LTGRT QNKLVHF P G R GTY V V++ QY++GDF+EVT +ATHRT+IPVL Sbjct: 223 VRIRPAFAQLLRSVSAVRGIRRVRYTSPHPKDMTAEVFDAMAETPEVMPHLHFPLQSGSDRILTAMHRGYTADRFLTKLAAARATIPDLAVTTDIIVGFPGETDDDFERTLEVAAAAEFDSAFTFVYSPRPGTEAAELVDDFCDPAVVKDRYARLRTVTERSALAKHSERIGRLEEVIVEGPSKKDPSRLTGRTGQNKLVHFDR---PDGPLRPGTYARVEVTEGHTQYLMGDFLEVTTKATHRTRIPVL 469
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A8F4FV63_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FV63_9ACTN) HSP 1 Score: 347 bits (890), Expect = 5.760e-115 Identity = 178/255 (69.80%), Postives = 208/255 (81.57%), Query Frame = 1 Query: 1 GEDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA-PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762 GEDVR+RP+F +LLR++G VEGIRRVRYTSPHPKD+ P+ +AMAETP V HLH P+QSGSDR+LAAMHRGYTAERYLEKLA AR+ I DLAV+TDIIVGFPGETD DFERTLE+AAAAEYDSAY F+YSPR GTEAAE+VD+F DP VV ER+ L+ V+ERSALAK+ ARIG VEEV+VEGPS++DP+VLTGRT QNKL+HF + PL RVGTY V + A ++ GD V VT A HRT+IPV A Sbjct: 234 GEDVRVRPLFADLLRSVGAVEGIRRVRYTSPHPKDLRPETIAAMAETPEVCEHLHLPVQSGSDRVLAAMHRGYTAERYLEKLAAARAAIADLAVTTDIIVGFPGETDDDFERTLELAAAAEYDSAYQFIYSPRAGTEAAELVDEFVDPAVVAERFDRLKVVLERSALAKHEARIGRVEEVVVEGPSRRDPSVLTGRTRQNKLIHFSSEQPL-----RVGTYAEVLCTGAAPHFLRGDLVAVTAPARHRTRIPVSA 483
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7X7D3A4_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7X7D3A4_9ACTN) HSP 1 Score: 340 bits (872), Expect = 3.210e-112 Identity = 171/250 (68.40%), Postives = 206/250 (82.40%), Query Frame = 1 Query: 10 VRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA-PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPV 756 VR+RP+F +LLR +G V+GIRRVRYTSPHPKD+ P+ +AMAETP V HLH PLQSGS+R+LA MHRGYTAERYLEK+A AR+ +PDLA++TD+IVGFPGETD DF++TL VAAAAEYDSAYTF+YSPRPGTEAAEMVD F DP+VV +R+ L+ V+ERSALAK+ AR+G VEEV+VEGPS+KDP+VLTGRT QNKLVHF +A P+ R GTY V V+ A ++ GD V VT ATHRT+IPV Sbjct: 239 VRVRPLFADLLRRVGAVDGIRRVRYTSPHPKDLRPETIAAMAETPAVCEHLHLPLQSGSNRLLAVMHRGYTAERYLEKVAAARAAMPDLALTTDLIVGFPGETDDDFDQTLSVAAAAEYDSAYTFIYSPRPGTEAAEMVDLFVDPEVVADRFDRLKVVLERSALAKHEARVGRVEEVVVEGPSRKDPSVLTGRTRQNKLVHFASADPI-----RTGTYAEVLVTGAAPHFLRGDLVRVTATATHRTRIPV 483
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7Y2N8H1_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=2 Tax=Acidimicrobiia TaxID=84992 RepID=A0A7Y2N8H1_9ACTN) HSP 1 Score: 339 bits (870), Expect = 3.830e-112 Identity = 169/251 (67.33%), Postives = 204/251 (81.27%), Query Frame = 1 Query: 7 DVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVL 759 DV+LRP F LLR++ VEGIRR+RYTSPHPKDMT DV+ AMA+TP V+PHLHFPLQSGS+ IL AMHRGYTA+RYLEKLAEAR IPDLAV+TDIIVGFPGE++ DF+ T+ VAA A +D A+TFVYSPRPGTEAA++ D FCDP VKER+ LRTVIER+ALA AR+G+++EV+VEGPSK D + LTGRT QNKLVHFP P G R G+Y TV+V++ Y++G+ VE+T RATHRT+I VL Sbjct: 222 DVKLRPAFANLLRSVAAVEGIRRLRYTSPHPKDMTTDVFEAMAQTPAVMPHLHFPLQSGSNAILKAMHRGYTAQRYLEKLAEARETIPDLAVTTDIIVGFPGESEEDFQATMAVAAEARFDHAFTFVYSPRPGTEAAQLSDVFCDPAEVKERFARLRTVIERNALAHNLARVGVIDEVMVEGPSKTDSDRLTGRTGQNKLVHFPK---PDGPLRAGSYATVKVTEGHTSYLVGELVEITARATHRTRIAVL 469
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: UPI0003473F4B (tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI0003473F4B) HSP 1 Score: 338 bits (866), Expect = 1.850e-111 Identity = 171/254 (67.32%), Postives = 202/254 (79.53%), Query Frame = 1 Query: 4 EDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLAL 765 E RLRP+F +LLR +G V+GIRRVRYTSPHPKDM P+ ++AMAET V HLH+PLQSGSDR+LA MHRGYTAERYLE+L +AR IPDLAVSTDIIVGFPGETD DFERTLEVAAAAEYD AYTF++SPRPGTEAAEM +F DP V ER++ LR V+ERSA+AK++AR+G +EEV+VEGPSKKDP V +GRT QNKLVHF AP P R G+Y V V+ A +++GDFVE A H +IPV +L Sbjct: 226 ESARLRPLFADLLRDVGAVDGIRRVRYTSPHPKDMRPETFAAMAETAAVCEHLHYPLQSGSDRVLALMHRGYTAERYLERLVDARRAIPDLAVSTDIIVGFPGETDDDFERTLEVAAAAEYDYAYTFIFSPRPGTEAAEMDAEFVDPAVASERFERLRVVVERSAIAKHQARVGRIEEVLVEGPSKKDPTVTSGRTRQNKLVHF-VAPRPM---RAGSYARVEVTRAAPHHLIGDFVEHVADARHTVRIPVASL 475
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A6J4IIC2_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=uncultured Acidimicrobiales bacterium TaxID=310071 RepID=A0A6J4IIC2_9ACTN) HSP 1 Score: 337 bits (863), Expect = 3.120e-111 Identity = 168/256 (65.62%), Postives = 204/256 (79.69%), Query Frame = 1 Query: 1 GEDV-RLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLAL 765 G D+ R RP+F ELLRA+G+VEGIRRVRYTSPHPKD+ P+ +AMAE P V HLH+PLQSGSDRILAAMHRGYTA+RYLEKL AR +P LAV+TDIIVGFPGETDADFERTLEV A AEYDSAYTFV+SPRPGTEAAE+ D F +V+ ER+ L+ V+ERSALA++ R+G+ EEV+VEGPS+KDP VL GRT QNKL+HFP+APL G T+ VRV+ A +++G+ + VT + HRT IPV+A+ Sbjct: 208 GRDLTRRRPLFSELLRAVGEVEGIRRVRYTSPHPKDLRPETIAAMAEVPTVCEHLHYPLQSGSDRILAAMHRGYTAQRYLEKLVSARQAVPGLAVTTDIIVGFPGETDADFERTLEVVAEAEYDSAYTFVFSPRPGTEAAELTDRFVPAEVIAERFARLKVVVERSALARHERRVGLTEEVLVEGPSRKDPAVLAGRTRQNKLIHFPSAPLAPG-----TFADVRVTRAAPHHLMGELLAVTAKPRHRTMIPVVAV 458
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A7Y1ZUY3_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZUY3_9ACTN) HSP 1 Score: 337 bits (864), Expect = 3.940e-111 Identity = 169/254 (66.54%), Postives = 202/254 (79.53%), Query Frame = 1 Query: 4 EDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHF-PAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762 E +LRP+F +LLR +G V+GIRRVR+TSPHPKDM PD ++AMAETP V HLH+PLQSGSDR+LA MHRGY+AERYLE+L++AR I DLAVSTDIIVGFPGETD DF TL+VAAAAE+DSAYTF++SPRPGTEAA M DF DP V ER++ LR V+ERSAL K+ AR+G +EEV+VEGPSK+DP V+TGRT QNKLVHF P PL R G+Y TVRV+ A Y+ GDFVE+ TH+ +IPV A Sbjct: 228 ESAKLRPLFSDLLRDVGAVDGIRRVRFTSPHPKDMRPDTFAAMAETPAVCEHLHYPLQSGSDRVLALMHRGYSAERYLERLSQAREAIDDLAVSTDIIVGFPGETDDDFADTLDVAAAAEFDSAYTFIFSPRPGTEAAGMEADFVDPQVAGERFQRLRVVVERSALRKHEARLGRIEEVLVEGPSKRDPGVVTGRTRQNKLVHFTPPRPL-----RTGSYATVRVTRAAPHYLAGDFVEIVSEPTHKLRIPVAA 476
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A2D6L1B2_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=7 Tax=Actinobacteria TaxID=201174 RepID=A0A2D6L1B2_9ACTN) HSP 1 Score: 336 bits (862), Expect = 7.440e-111 Identity = 167/255 (65.49%), Postives = 206/255 (80.78%), Query Frame = 1 Query: 4 EDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHF-PAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLAL 765 ++ RLRP+F +LL A+G V+GIRRVR+TSPHPKDM P+ ++AMA++P V HLH+PLQSGSDR+LA MHRGYTA+RYLE+LA+AR IPDLAVSTDIIVGFPGET+ADFE+TLEV AAA YD AYTF++SPRPGTEAA++ DF DP V ER++ LR V+ERSAL ++ AR+GMVEEV+VEGPSKKDP+VL GRT QNKLVHF P PL R G+Y TV ++ ++LG+FVE+ THR +IPV AL Sbjct: 226 DEARLRPLFADLLTAVGNVDGIRRVRFTSPHPKDMRPETFAAMAQSPAVCEHLHYPLQSGSDRVLALMHRGYTADRYLERLADARRHIPDLAVSTDIIVGFPGETEADFEQTLEVTAAAGYDFAYTFIFSPRPGTEAADLEADFVDPAVAGERFERLRAVVERSALQRHEARVGMVEEVLVEGPSKKDPSVLAGRTRQNKLVHFTPPTPL-----RTGSYATVEITHGAPHHLLGNFVELVAEPTHRRRIPVEAL 475
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A6N2DIY9_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DIY9_9ACTN) HSP 1 Score: 334 bits (856), Expect = 3.680e-110 Identity = 167/251 (66.53%), Postives = 202/251 (80.48%), Query Frame = 1 Query: 13 RLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHF-PAAPLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762 +LRP+F +LLR +G V+GIRRVR+TSPHPKDM P+ + AMA+T V HLH+PLQ+GSDR+LAAMHRGYTAERYLE+LAEAR ++PDLAVSTDIIVGFPGETD DFERTLEVAAAAE+DSAYTF++SPRPGTEAA M D+F DP V ER++ LR V+ERS+L K+ AR+G VEEV+VEGPSKKDP V +GRT QNKLVHF P PL R G+Y TV V+ +++G FV++ HRT+IPV A Sbjct: 213 KLRPLFADLLRHVGAVDGIRRVRFTSPHPKDMRPETFGAMADTSAVCEHLHYPLQAGSDRVLAAMHRGYTAERYLERLAEARRLVPDLAVSTDIIVGFPGETDDDFERTLEVAAAAEFDSAYTFIFSPRPGTEAAGMEDEFVDPAVAGERFQRLRVVVERSSLLKHEARVGRVEEVLVEGPSKKDPTVTSGRTRQNKLVHFTPPRPL-----RAGSYATVEVTYGAPHHLIGRFVDLVAEPNHRTRIPVAA 458
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Match: A0A351ERJ5_9ACTN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ERJ5_9ACTN) HSP 1 Score: 333 bits (855), Expect = 7.750e-110 Identity = 169/255 (66.27%), Postives = 203/255 (79.61%), Query Frame = 1 Query: 1 GEDVRLRPMFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLQSGSDRILAAMHRGYTAERYLEKLAEARSMIPDLAVSTDIIVGFPGETDADFERTLEVAAAAEYDSAYTFVYSPRPGTEAAEMVDDFCDPDVVKERYKALRTVIERSALAKYRARIGMVEEVIVEGPSKKDPNVLTGRTAQNKLVHFPAA-PLPQGAGRVGTYVTVRVSDAKHQYMLGDFVEVTHRATHRTKIPVLA 762 GEDVRLRPMF +LLR +G ++GI+R+RYTSPHPKDM DV AMAET V HLH PLQSGSDR+L+ MHRGY AERYL + +AR+ IPDLAV+TDIIVGFPGET+ADFERTLEVAA +YDSAYTFV+SPRPGTEAA+M DFCDP V +RY+ LR VIERSA ++ ARIG EEV+VEG SK+D +VLTGRT QNKL+HFP A P+ + G+Y TV+V+DA QY++G+ VEVT RT+IPV+A Sbjct: 222 GEDVRLRPMFAKLLRTIGDIDGIQRIRYTSPHPKDMQLDVAEAMAETAAVCEHLHMPLQSGSDRVLSLMHRGYNAERYLRVIEQARATIPDLAVTTDIIVGFPGETEADFERTLEVAAEVKYDSAYTFVFSPRPGTEAADMEADFCDPAEVTDRYERLRVVIERSARQRHAARIGKTEEVVVEGTSKRDDSVLTGRTRQNKLIHFPTANPI-----KAGSYATVKVTDAGMQYLMGELVEVTATPKRRTRIPVVA 471 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75809.17881.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75809.17881.1 >prot_M-pyrifera_M_contig75809.17881.1 ID=prot_M-pyrifera_M_contig75809.17881.1|Name=mRNA_M-pyrifera_M_contig75809.17881.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=249bp MFPELLRAMGKVEGIRRVRYTSPHPKDMTPDVYSAMAETPNVVPHLHFPLback to top mRNA from alignment at M-pyrifera_M_contig75809:2..772+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75809.17881.1 ID=mRNA_M-pyrifera_M_contig75809.17881.1|Name=mRNA_M-pyrifera_M_contig75809.17881.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=771bp|location=Sequence derived from alignment at M-pyrifera_M_contig75809:2..772+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75809:2..772+ >mRNA_M-pyrifera_M_contig75809.17881.1 ID=mRNA_M-pyrifera_M_contig75809.17881.1|Name=mRNA_M-pyrifera_M_contig75809.17881.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1494bp|location=Sequence derived from alignment at M-pyrifera_M_contig75809:2..772+ (Macrocystis pyrifera P11B4 male)back to top |