mRNA_M-pyrifera_M_contig75652.17844.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A3D0S3L0_9ACTN (Uncharacterized protein n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A3D0S3L0_9ACTN) HSP 1 Score: 68.6 bits (166), Expect = 2.990e-10 Identity = 34/62 (54.84%), Postives = 42/62 (67.74%), Query Frame = 1 Query: 1 YFTASTVDEGRELWRTDGTAAGTTLVADVNPN--------GDSDPAHLTSVGGVLYFMADDG 162 +FTA+ GRELW++DGT AGT +V D+NPN G P HLT+VGGV+YF ADDG Sbjct: 53 FFTAADDTHGRELWKSDGTTAGTVMVKDINPNVVPYGGYGGYDGPQHLTAVGGVVYFSADDG 114
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A2E9RLC3_9GAMM (Uncharacterized protein n=2 Tax=unclassified Alcanivorax TaxID=2638842 RepID=A0A2E9RLC3_9GAMM) HSP 1 Score: 67.8 bits (164), Expect = 4.760e-10 Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 1 Query: 1 YFTASTVDEGRELWRTDGTAAGTTLVADVNPNGDSDPAHLTSVGGVLYFMADD 159 YF A +G ELWR+DGT AGT +VAD+NPNGDSDP +T G +YF ADD Sbjct: 65 YFPAMNGMDGVELWRSDGTEAGTAMVADINPNGDSDPREITRFDGRVYFSADD 117
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A2H6KYE5_MICAE (Uncharacterized protein n=2 Tax=Microcystis aeruginosa TaxID=1126 RepID=A0A2H6KYE5_MICAE) HSP 1 Score: 66.2 bits (160), Expect = 7.790e-10 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 1 YFTASTVDEGRELWRTDGTAAGTTLVADVNP-----NGDSDPAHLTSVGGVLYFMADDGV 165 YFTA + GRELW++DGTA GT LV D+ P + DSDP++LT VG L+F A+DGV Sbjct: 130 YFTADDGENGRELWKSDGTATGTVLVRDIRPGSPTSSSDSDPSNLTVVGNTLFFSANDGV 189
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A517SDJ2_9PLAN (Cadherin domain protein n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SDJ2_9PLAN) HSP 1 Score: 66.6 bits (161), Expect = 1.480e-9 Identity = 74/185 (40.00%), Postives = 93/185 (50.27%), Query Frame = 1 Query: 1 YFTA-STVDEGRELWRTDGTAAGTTLVADVNPNGDSDPAHLTSVGGV-LYFMADDGVXXXXXXXXXXXXXXXXXXXXXXXGPEGTDAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGT-------------GQFAQLAVGQSSDPMMLKANAADTLLYFFADDGVHGSDPWVTDGTLVGTKTL 510 YFTA V+ GRELWRTDGTAAGT +VA++ PNGD D +T G ++F A+DG XXXXXXXXXXXXXXXXXX G + S GT G L V Q+S+P L + ++YF A+DG+ G + W TDGT GT+ + Sbjct: 275 YFTAVDIVNNGRELWRTDGTAAGTFMVANIKPNGDGDITDITPANGTSVFFSANDGAXXXXXXXXXXXXXXXXXXKDIQGVINGVNQGSNPSSMLWVNGVLYFSADDGIVGKELWKSDGTAAGTVLVRDIAQTGPNGVLDVKQNSNPHNL--TLVNGVVYFSANDGLEGFELWQTDGTTGGTQIV 457
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A7X7IPV1_9BACT (Uncharacterized protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7X7IPV1_9BACT) HSP 1 Score: 65.1 bits (157), Expect = 3.080e-9 Identity = 58/188 (30.85%), Postives = 75/188 (39.89%), Query Frame = 1 Query: 1 YFTASTVDEGRELWRTDGTAAGTTLVADV-----------NPNGDSDPAHLTSVGGVLYFMADDGVXXXXXXXXXXXXXXXXXXXXXXXGPEGTDAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGTGQFAQLAVGQSSDPMMLKANAADTLLYFFADDGVHGSDPWVTDGTLVGTKTLGDLDAGS 531 YF+A G ELWR+DGTAAGT +V D+ PN S+PA+L +VGG L+F A D +GT++ TGT SS P L D +LYF ADDG HG + W +DGT GT + D+ AG+ Sbjct: 65 YFSAEDNTHGAELWRSDGTAAGTVMVKDIFSGTFTDSYGTYPNS-SNPANLVNVGGTLFFTAYDDDHGWELWTS-----------------DGTESGTRLVKDIF---------------------TGTFTDTDGTYPNSSTPSQL--TDVDGVLYFVADDGTHGLELWKSDGTEAGTTMVEDIRAGT 211
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: UPI0003467469 (hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 TaxID=118161 RepID=UPI0003467469) HSP 1 Score: 64.7 bits (156), Expect = 6.370e-9 Identity = 59/196 (30.10%), Postives = 74/196 (37.76%), Query Frame = 1 Query: 1 YFTASTVDEGRELWRTDGTAAGTTLVADVNPNGDSD--------PAHLTSVGGVLYFMADDGVXXXXXXXXXXXXXXXXXXXXXXXGPE------GTDAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGTGQFAQLAVGQSSDPMMLKANAADTL-----LYFFADDGVHGSDPWVTDGTLVGTKTLGDLDAGS 531 YFTA + GRELW +DGT+ GT L+ D+ P G SD P LT LYF A+DG G G+ AR S GT + G S + A + LYF ADDG HG++ WV+DGT GT+ L D+ GS Sbjct: 519 YFTADDGENGRELWVSDGTSEGTQLLVDIRP-GSSDYGYNYGSVPDDLTEFNDQLYFTANDGENGRELWVSDGTSEGTQLLVDINPGSSDYGYNYGSYARNLTEFNEQLYFTANDGDNGNELWVSDGTSEGTQLLVDINPGSSDYGYNYGSYARNLTEFNEQLYFTADDGEHGNELWVSDGTTEGTQLLVDIRPGS 713
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A521K640_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521K640_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 1.070e-8 Identity = 92/175 (52.57%), Postives = 103/175 (58.86%), Query Frame = 1 Query: 28 GRELWRTDGTAAGTTLVADVNPNG-DSDPAHLTSVGGVLYFMADDGVXXXXXXXXXXXXXXXXXXXXXXXGPEGTDAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGTGQFAQLAV-------GQSSDPMMLKANAADTLLYFFADDGVHGSDPWVTDGTLVGTKTLGDLDAG 528 G ELWRTDGT AGT LVAD+ P SDP T L F ADDGV XXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX ST G +AQ A GQ ++A ++F +DGVHGS+PW +DGT+VGT+ D G Sbjct: 3 GVELWRTDGTTAGTQLVADIRPGAAGSDPQRFTRCADELLFTADDGVTGRXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXFAFGASSTQLGVYAQGAAQVLHGFAGQGFGVSSIRA-VGSRRVFFSGNDGVHGSEPWSSDGTVVGTQMYDDFQPG 164
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A7C1KIE9_9BACT (Uncharacterized protein n=1 Tax=Gemmata sp. TaxID=1914242 RepID=A0A7C1KIE9_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 1.600e-8 Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 1 YFTASTVDEGRELWRTDGTAAGTTLVADVNPNGDSDPAHLTSVGGVLY 144 YF A+ RELWRTDGTAAGT VAD+NP G S+P +LT+V G L+ Sbjct: 2 YFAATDASGDRELWRTDGTAAGTWRVADINPIGSSNPRYLTNVNGTLF 49
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: A0A0G2ZGC0_9DELT (Flagellar hook-length control protein FliK n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZGC0_9DELT) HSP 1 Score: 63.2 bits (152), Expect = 2.020e-8 Identity = 89/184 (48.37%), Postives = 107/184 (58.15%), Query Frame = 1 Query: 1 YFTASTVDEGR----ELWRTDGTAAGTTLVADVNPNGDSDPAHLTSVGGVLYFMADDGVXXXXXXXXXXXXXXXXXXXXXXXGPEGTDAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGTGQFAQL---AVGQSSDPMMLKANAADTLLYFFADDGVHGSDPWVTDGTLVGTKTLGDLDAGS 531 YF+A+ G ELW++DGTAAGT V ++N GDS P LT + G L F ADDG XXXXXXXXXXXXXXX G E + XXXXXXXXXXXXXXXXXXXXXX + +SS P A + LYF ADD HG++ W +DGT GT+ + D+ AG+ Sbjct: 66 YFSANGAPAGESSDIELWKSDGTAAGTMRVENINRLGDSIPDLLTDLNGTLLFTADDGTRGVXXXXXXXXXXXXXXXREIGEGLESGGTSQIVTMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINPTPPPRSSGPAAGTLRVAGSTLYFLADDATHGTELWKSDGTEAGTQLVKDVVAGA 249
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Match: UPI00093304BE (hyalin n=1 Tax=Microcystis aeruginosa TaxID=1126 RepID=UPI00093304BE) HSP 1 Score: 62.0 bits (149), Expect = 5.230e-8 Identity = 54/172 (31.40%), Postives = 70/172 (40.70%), Query Frame = 1 Query: 34 ELWRTDGTAAGTTLVADVNPNGD------SDPAHLTSVGGVLYFMADDGVXXXXXXXXXXXXXXXXXXXXXXXGPEGTDAREXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGTGQFAQLAVGQSSDPMMLKANAADTLLYFFADDGVHGSDPWVTDGTLVGTKTLGDLDAGS 531 ELW++DGTAAGT LV D+NP GD S P +LT+VG LYF ADD V +GT+A G + + SS P L A L+F A D V+G + W ++GT GT + D+ AGS Sbjct: 98 ELWKSDGTAAGTVLVKDINPGGDYMVPFASFPKNLTAVGSTLYFTADDNVNGRELWKS-----------------DGTEAGTVLVKDIRP-----------------------GSYGSYSY--SSSPYNL--TAVGNTLFFTAFDDVNGEELWKSNGTAAGTVLVRDIRAGS 225 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75652.17844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75652.17844.1 >prot_M-pyrifera_M_contig75652.17844.1 ID=prot_M-pyrifera_M_contig75652.17844.1|Name=mRNA_M-pyrifera_M_contig75652.17844.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp YFTASTVDEGRELWRTDGTAAGTTLVADVNPNGDSDPAHLTSVGGVLYFMback to top mRNA from alignment at M-pyrifera_M_contig75652:48..581- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75652.17844.1 ID=mRNA_M-pyrifera_M_contig75652.17844.1|Name=mRNA_M-pyrifera_M_contig75652.17844.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig75652:48..581- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75652:48..581- >mRNA_M-pyrifera_M_contig75652.17844.1 ID=mRNA_M-pyrifera_M_contig75652.17844.1|Name=mRNA_M-pyrifera_M_contig75652.17844.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig75652:48..581- (Macrocystis pyrifera P11B4 male)back to top |