mRNA_M-pyrifera_M_contig7561.17832.1 (mRNA) Macrocystis pyrifera P11B4 male
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7561.17832.1 vs. uniprot
Match: D7G761_ECTSI (Imm downregulated 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G761_ECTSI) HSP 1 Score: 401 bits (1031), Expect = 1.470e-133 Identity = 197/218 (90.37%), Postives = 206/218 (94.50%), Query Frame = 2 Query: 2 QVSREGFQCIDEYLENHRNVDRHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSSLHPDRPGGSRYQTESELDETEFVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYNRFRRVM-GGETVFELSDIVTEAWKLPKLLMIKPDHSVAKGSNFVENLRNQGIEASAAKRAAKEAAKEEVTA 652 QVSREGFQ IDEYLENHRNV+RHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKS+LHPDRPGGSRYQTE LDET++VRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKY RFRRVM GE VFELS+IV EAWKLPKLLMIKPDHSVAKGSNFV+NLRNQGIEA+AAK+AAK A KE+ A Sbjct: 176 QVSREGFQSIDEYLENHRNVERHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSALHPDRPGGSRYQTEVPLDETDYVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYKRFRRVMEDGEEVFELSNIVNEAWKLPKLLMIKPDHSVAKGSNFVDNLRNQGIEAAAAKKAAKAAEKEKAEA 393
BLAST of mRNA_M-pyrifera_M_contig7561.17832.1 vs. uniprot
Match: A0A0G4HAE1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HAE1_9ALVE) HSP 1 Score: 254 bits (648), Expect = 1.690e-75 Identity = 121/196 (61.73%), Postives = 155/196 (79.08%), Query Frame = 2 Query: 2 QVSREGFQCIDEYLENHRNVDRHEWVTQPQYENMKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSSLHPDRPGGSRYQTESELDE--TEFVRAVQYYASKVEPLPDGKCLLRMVTWGEMCDSYTAFWINKFNAHVFITPKYNRFRRVMGGETVFELSDIVTEAWKLPKLLM----IKPDHSVAK-GSNF 568 QVSREGFQCIDEYL NHR VD+++W+T+P+ E+ KDYELM NRVEW YP ++REFVALD + RP ++LISKS+LHP+RPGGSRYQ E+D + FVRAVQYY SKVEP+ KCLL MVTWGEMCD+Y+A+W+N+FN ++FITPK+ RFR M G+TV+E S+IV AW + KL +KPD ++ K G++F Sbjct: 228 QVSREGFQCIDEYLVNHRKVDQYKWLTRPELESGKDYELMMNRVEWRYPFKSREFVALDTVHRPERVLISKSALHPERPGGSRYQDALEVDPPGSPFVRAVQYYGSKVEPVGPNKCLLYMVTWGEMCDNYSAWWVNQFNKYLFITPKFRRFREAMSGKTVWEESNIVNNAWDILKLKHNMGGLKPDRTILKNGADF 423 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7561.17832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7561.17832.1 >prot_M-pyrifera_M_contig7561.17832.1 ID=prot_M-pyrifera_M_contig7561.17832.1|Name=mRNA_M-pyrifera_M_contig7561.17832.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp MKDYELMTNRVEWAYPTQTREFVALDIIDRPRKILISKSSLHPDRPGGSRback to top mRNA from alignment at M-pyrifera_M_contig7561:1565..3103+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7561.17832.1 ID=mRNA_M-pyrifera_M_contig7561.17832.1|Name=mRNA_M-pyrifera_M_contig7561.17832.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1539bp|location=Sequence derived from alignment at M-pyrifera_M_contig7561:1565..3103+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7561:1565..3103+ >mRNA_M-pyrifera_M_contig7561.17832.1 ID=mRNA_M-pyrifera_M_contig7561.17832.1|Name=mRNA_M-pyrifera_M_contig7561.17832.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1110bp|location=Sequence derived from alignment at M-pyrifera_M_contig7561:1565..3103+ (Macrocystis pyrifera P11B4 male)back to top |