mRNA_M-pyrifera_M_contig75485.17810.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75485.17810.1
Unique NamemRNA_M-pyrifera_M_contig75485.17810.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: S8F841_FOMPI (Phosphatases II n=1 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8F841_FOMPI)

HSP 1 Score: 80.5 bits (197), Expect = 7.590e-16
Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    4 AEGTPAAHE-VYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDA----RVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASVDAHD 474
            A G+ AA   +   L++GP   A+NK +LE N ITHV+S+     P   ++G++ H   + DS  + LS V   A   I +++ S        ++ +HC+AG SRS ++ + Y+++  GMSLK+A       R  + PN GF + L +L+ +  G  S+D  +
Sbjct:    8 ASGSAAAVSLILPSLYLGPCSAASNKSFLENNAITHVLSIG--STPASKVEGVTYHRLSLNDSATSLLSKVADEACKIIDSAVASKGKGGGKGKIFVHCSAGISRSPSLVVAYLMKSRGMSLKEALGHVARARPQVSPNPGFLRQLKELDQDLHGTVSLDVDE 168          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: UPI001CF69556 (dual specificity protein phosphatase 18 n=2 Tax=Thunnus TaxID=8234 RepID=UPI001CF69556)

HSP 1 Score: 79.0 bits (193), Expect = 2.210e-15
Identity = 55/160 (34.38%), Postives = 82/160 (51.25%), Query Frame = 1
Query:    1 MAEGTPAAHE----VYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTH-HFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASV 462
            M + TPA       V D L++     A +   +  NKIT ++++T          G+  + H P+ DS+ + L         TI+  L S    R L+HCNAG SRS A+ + Y+++  G++L +A+   K  R  + PN GFWK LIQ E+E RG  SV
Sbjct:    1 MHQSTPAGLSGLCRVTDHLYLSNGRAAGDASQVTRNKITCIINVTETRNSSPAPPGVEEYVHIPVSDSLVSPLCDHFDGVADTIQ--LISERGGRTLVHCNAGVSRSAALCMAYLMKHRGVTLLEAHRWVKTCRPMVRPNNGFWKQLIQYEMECRGCTSV 158          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: A0A3Q1BP79_AMPOC (Dual specificity protein phosphatase 18-like n=3 Tax=Pomacentridae TaxID=30863 RepID=A0A3Q1BP79_AMPOC)

HSP 1 Score: 78.2 bits (191), Expect = 4.270e-15
Identity = 51/145 (35.17%), Postives = 75/145 (51.72%), Query Frame = 1
Query:   31 VYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASV 462
            V D L++     A +   L +N IT ++++T          G+   H P+ DS  + L          I T+  SS   R L+HCNAG SRS A+ + Y+V+  G++L +A+   K  R    PN GFW+ L+Q EVE RG +SV
Sbjct:   15 VTDHLYLSNQRAANDASQLTDNNITCIINVTETRTSSSAPPGLDYIHIPVPDSPLSPLRDHFDEVADKIHTTAESS--GRTLVHCNAGVSRSPALCMAYLVKHRGLTLLEAHRWVKTCRPVARPNNGFWRQLVQYEVELRGCSSV 157          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: S8DKT8_FOMPI (Phosphatases II n=2 Tax=Fomitopsis pinicola (strain FP-58527) TaxID=743788 RepID=S8DKT8_FOMPI)

HSP 1 Score: 78.2 bits (191), Expect = 6.030e-15
Identity = 50/159 (31.45%), Postives = 84/159 (52.83%), Query Frame = 1
Query:   13 TPAAHEVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDA----RVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASVDAHD 474
            T A   +   L++GP   A+NK +LE N ITHV+S+     P   ++G++ H   + DS  ++LS     A   I  ++ S        ++ +HC+AG SRS ++ + Y+++  GMSLK+A  +    R  + PN GF + L +L+    G  S+D  +
Sbjct:   13 TEAVSLILPSLYLGPCSAASNKSFLENNAITHVLSIG--STPASKVEGVTYHRLSLTDSATSNLSKATGEACKIIDGAVSSKGKGGGKGKIYVHCSAGISRSPSLVVAYLMKSRGMSLKEALGQVARARPQVSPNPGFLRQLKELDQYLHGTVSLDVDE 169          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: A0A2R5G9V3_9STRA (Dual specificity protein phosphatase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9V3_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.000e-14
Identity = 48/146 (32.88%), Postives = 78/146 (53.42%), Query Frame = 1
Query:   28 EVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRSGAVALWYMVEEGMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASVD 465
            E+ + L++G    + +   L +  I H+V+ T + P   +  G+      +EDS DAD+++ L  A   I ++     DA+VL+HC  G SRS  + L +++ +GM LKDA   AK  R  + PN  F   L++LE +  G  S+D
Sbjct:   47 EIMEYLYLGAKTVSQDGDALADMGIRHIVNCTVEEPNHFEARGVKYLRVAVEDSPDADIANFLEPAHLFIESARKE--DAKVLVHCTMGMSRSSTIVLAHLMYDGMRLKDAMTLAKAKRSMVSPNSTFMAQLLELETKLFGSQSID 190          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: A0A2T3YZL1_9HYPO (Uncharacterized protein n=1 Tax=Trichoderma asperellum CBS 433.97 TaxID=1042311 RepID=A0A2T3YZL1_9HYPO)

HSP 1 Score: 73.9 bits (180), Expect = 2.000e-13
Identity = 48/146 (32.88%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   43 LFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDA-RVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASVDAHD 474
            + +GP   A++   L+ N I HV+S+     P     G++ H   + DS  + +  +  TA   I T+L S+    R+L+HC+AG SRS AV   Y+++   MSL+ A  +    R  + PN GF + L +LE++ RG+ S++A +
Sbjct:   18 ILIGPASAASSISLLQANSIAHVLSVGTS--PSSKAPGVAYHRVSVTDSPSSSIMKISGTACDIIETALQSNNGTGRILVHCSAGISRSPAVVAAYLMKHHDMSLRAALGQIVRARPQVSPNPGFLRELKELELQLRGMLSLEAEE 161          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: UPI001FB8427A (dual specificity protein phosphatase 18-like n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB8427A)

HSP 1 Score: 72.8 bits (177), Expect = 4.910e-13
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 1
Query:   28 EVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRGVASV 462
            +V + L++     A +   +  + IT +++ T + P      G+   H P+ DS    L          I T+  S    R L+HCNAG SRS A+ + Y+++  G++L +A+   +  R  + PN GFWK LIQ EVE RG  SV
Sbjct:   14 QVTEHLYLSNGRAANDSSQVTRSGITCIINATENKPSSCPPPGVDYIHIPLSDSPAFPLIDHFDEVADKIHTNAESG--GRTLVHCNAGVSRSAALCMAYLMKHRGVTLLEAHRLVRTCRPVVRPNNGFWKQLIQYEVELRGGNSV 157          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: A0A5C3LY91_9AGAR (Protein-tyrosine phosphatase-like protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3LY91_9AGAR)

HSP 1 Score: 72.8 bits (177), Expect = 7.260e-13
Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1
Query:   22 AHEVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDH---PPLDDLDGISTH-HFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRS-GAVALWYMVEEGMSLKDAYERAKGIRENIEPNIGFWKTL 423
            A E+  RL++     A N G L   +ITH++S  PD+   PP   L         P+ED+  A+L++ L T T  IR +L + P+ARVL+HC  G SRS   VA + M + G +   A +  K  R   +PN GF + L
Sbjct:   49 ASEIIPRLYISDLSFAENPGLLSSYRITHIMSTLPDNVYRPPPSLLPFQPARMQIPVEDTPFAELAAHLPTTTAWIRAALAADPEARVLVHCVEGVSRSVSVVAAFLMSQYGWTADQAVQYVKSKRMQADPNFGFVQQL 187          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: A0A0D0AMB0_9AGAR (Uncharacterized protein (Fragment) n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0AMB0_9AGAR)

HSP 1 Score: 71.6 bits (174), Expect = 8.620e-13
Identity = 52/148 (35.14%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   28 EVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDH----PPLDDLDGISTHHF--PIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRS-GAVALWYMVEEGMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRG 450
            E+  R+++     A N   L   +ITH++S+ P+     P +  + G +  H   PIED   A+L++ L T T  IR +L  +P+ARVL+HC  G SRS   VA + M + G + K+A    K  R    PN GF K L +   E  G
Sbjct:   10 EIVSRVYISDLSFAENPSLLASYRITHILSILPETVCIPPNIHSIIGYTPIHLQLPIEDFPFAELAAHLPTTTAFIRDALRGNPEARVLIHCAEGISRSVSVVAAFLMAQYGWTPKEAVGYIKQKRSIANPNFGFIKQLYEYGREGLG 157          
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Match: A0A8K0XHR7_9AGAM (Phosphotyrosine protein n=1 Tax=Phlebopus sp. FC_14 TaxID=2615122 RepID=A0A8K0XHR7_9AGAM)

HSP 1 Score: 71.6 bits (174), Expect = 1.180e-12
Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 1
Query:   16 PAAHEVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDLDGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQSRSGAVALWYMVEE-GMSLKDAYERAKGIRENIEPNIGFWKTL 423
            P A E+  RL+V     A N   L    ITHV+S    +  L     +    FP+ED   ++L++ L   T  +R+++H  P+ARVL+HC  G SRS +V   Y++ E G S   A +  K  R + EPN GF + L
Sbjct:   19 PGASEIMPRLYVSDLAFAENPAALASLGITHVLSAMRGYVSLPSNPHLHRTQFPLEDLPFSELAAHLPATTAFLRSAMHD-PNARVLVHCMEGVSRSTSVVCAYLIAEFGWSPTQAIQYVKSRRRSAEPNFGFVQQL 154          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75485.17810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
S8F841_FOMPI7.590e-1632.52Phosphatases II n=1 Tax=Fomitopsis pinicola (strai... [more]
UPI001CF695562.210e-1534.38dual specificity protein phosphatase 18 n=2 Tax=Th... [more]
A0A3Q1BP79_AMPOC4.270e-1535.17Dual specificity protein phosphatase 18-like n=3 T... [more]
S8DKT8_FOMPI6.030e-1531.45Phosphatases II n=2 Tax=Fomitopsis pinicola (strai... [more]
A0A2R5G9V3_9STRA1.000e-1432.88Dual specificity protein phosphatase, putative n=1... [more]
A0A2T3YZL1_9HYPO2.000e-1332.88Uncharacterized protein n=1 Tax=Trichoderma aspere... [more]
UPI001FB8427A4.910e-1332.88dual specificity protein phosphatase 18-like n=1 T... [more]
A0A5C3LY91_9AGAR7.260e-1336.69Protein-tyrosine phosphatase-like protein n=1 Tax=... [more]
A0A0D0AMB0_9AGAR8.620e-1335.14Uncharacterized protein (Fragment) n=1 Tax=Gymnopu... [more]
A0A8K0XHR7_9AGAM1.180e-1235.77Phosphotyrosine protein n=1 Tax=Phlebopus sp. FC_1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75485contigM-pyrifera_M_contig75485:223..696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score84.0
Seed ortholog evalue7.1e-14
Seed eggNOG ortholog104355.XP_007863883.1
KEGG koko:K04459,ko:K14165
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatases ii
EggNOG OGs22AK9@155619,38I4V@33154,3H5XI@355688,3PDAQ@4751,3VC43@5204,COG2453@1,KOG1716@2759
EC3.1.3.16,3.1.3.48
COG Functional cat.V
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons1
Model size474
Cds size474
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816652.8735676-CDS-M-pyrifera_M_contig75485:222..6961622816652.8735676-CDS-M-pyrifera_M_contig75485:222..696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75485 223..696 -
1692278100.176853-CDS-M-pyrifera_M_contig75485:222..6961692278100.176853-CDS-M-pyrifera_M_contig75485:222..696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75485 223..696 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75485.17810.1prot_M-pyrifera_M_contig75485.17810.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75485 223..696 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75485.17810.1

>prot_M-pyrifera_M_contig75485.17810.1 ID=prot_M-pyrifera_M_contig75485.17810.1|Name=mRNA_M-pyrifera_M_contig75485.17810.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
MAEGTPAAHEVYDRLFVGPWMPAANKGWLEENKITHVVSMTPDHPPLDDL
DGISTHHFPIEDSVDADLSSVLTTATTTIRTSLHSSPDARVLLHCNAGQS
RSGAVALWYMVEEGMSLKDAYERAKGIRENIEPNIGFWKTLIQLEVEKRG
VASVDAHD
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mRNA from alignment at M-pyrifera_M_contig75485:223..696-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75485.17810.1 ID=mRNA_M-pyrifera_M_contig75485.17810.1|Name=mRNA_M-pyrifera_M_contig75485.17810.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=474bp|location=Sequence derived from alignment at M-pyrifera_M_contig75485:223..696- (Macrocystis pyrifera P11B4 male)
ATGGCAGAAGGAACCCCCGCTGCGCACGAAGTGTATGACAGATTATTTGT GGGACCTTGGATGCCAGCAGCGAACAAAGGGTGGCTGGAAGAAAACAAAA TCACCCACGTTGTCTCTATGACGCCTGATCATCCACCTCTCGATGACTTG GATGGTATTTCCACCCATCACTTCCCCATTGAAGACTCTGTAGATGCAGA CCTTTCCTCTGTCCTCACGACAGCTACGACAACCATTCGTACCTCGCTCC ATTCTTCACCTGATGCCCGTGTGCTCCTCCACTGCAACGCAGGGCAGTCT AGATCAGGTGCAGTTGCCCTGTGGTATATGGTGGAGGAAGGAATGAGTCT CAAAGACGCGTATGAGAGGGCGAAAGGGATCCGCGAGAATATTGAACCAA ATATTGGTTTCTGGAAGACACTCATCCAACTGGAAGTGGAAAAGAGAGGT GTGGCAAGTGTTGACGCTCATGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75485:223..696-

>mRNA_M-pyrifera_M_contig75485.17810.1 ID=mRNA_M-pyrifera_M_contig75485.17810.1|Name=mRNA_M-pyrifera_M_contig75485.17810.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=948bp|location=Sequence derived from alignment at M-pyrifera_M_contig75485:223..696- (Macrocystis pyrifera P11B4 male)
ATGGCAGAAGGAACCCCCGCTGCGCACGAAGTGTATGACAGATTATTTGT
GGGACCTTGGATGCCAGCAGCGAACAAAGGGTGGCTGGAAGAAAACAAAA
TCACCCACGTTGTCTCTATGACGCCTGATCATCCACCTCTCGATGACTTG
GATGGTATTTCCACCCATCACTTCCCCATTGAAGACTCTGTAGATGCAGA
CCTTTCCTCTGTCCTCACGACAGCTACGACAACCATTCGTACCTCGCTCC
ATTCTTCACCTGATGCCCGTGTGCTCCTCCACTGCAACGCAGGGCAGTCT
AGATCAGGTGCAGTTGCCCTGTGGTATATGGTGGAGGAAGGAATGAGTCT
CAAAGACGCGTATGAGAGGGCGAAAGGGATCCGCGAGAATATTGAACCAA
ATATTGGTTTCTGGAAGACACTCATCCAACTGGAAGTGGAAAAGAGAGGT
GTGGCAAGTGTTGACGCTCATGATATGGCAGAAGGAACCCCCGCTGCGCA
CGAAGTGTATGACAGATTATTTGTGGGACCTTGGATGCCAGCAGCGAACA
AAGGGTGGCTGGAAGAAAACAAAATCACCCACGTTGTCTCTATGACGCCT
GATCATCCACCTCTCGATGACTTGGATGGTATTTCCACCCATCACTTCCC
CATTGAAGACTCTGTAGATGCAGACCTTTCCTCTGTCCTCACGACAGCTA
CGACAACCATTCGTACCTCGCTCCATTCTTCACCTGATGCCCGTGTGCTC
CTCCACTGCAACGCAGGGCAGTCTAGATCAGGTGCAGTTGCCCTGTGGTA
TATGGTGGAGGAAGGAATGAGTCTCAAAGACGCGTATGAGAGGGCGAAAG
GGATCCGCGAGAATATTGAACCAAATATTGGTTTCTGGAAGACACTCATC
CAACTGGAAGTGGAAAAGAGAGGTGTGGCAAGTGTTGACGCTCATGAT
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