mRNA_M-pyrifera_M_contig75482.17808.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig75482.17808.1
Unique NamemRNA_M-pyrifera_M_contig75482.17808.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: UPI001EE62229 (nose resistant to fluoxetine protein 6-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE62229)

HSP 1 Score: 90.9 bits (224), Expect = 7.520e-19
Identity = 42/103 (40.78%), Postives = 68/103 (66.02%), Query Frame = 1
Query:   40 RPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLEAMVMK 348
            RP ++L ++ ++ VC  G GG VNSIL+   W PL +LT+GAYL+H+ ++T  + +R  A+ YN+  L+  F GTW +TYG A +  +LVE P + +E  +++
Sbjct:  679 RPAWALCVSWVILVCGSGCGGIVNSILSWEAWIPLGRLTYGAYLLHVMVLTTRHANRRTAYYYNAEYLSYEFLGTWGITYGMAFIFAVLVEAPCLGIEKALLR 781          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: A0A2G8JP07_STIJA (Putative nose resistant to fluoxetine protein 6 n=2 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8JP07_STIJA)

HSP 1 Score: 86.3 bits (212), Expect = 3.050e-17
Identity = 46/112 (41.07%), Postives = 69/112 (61.61%), Query Frame = 1
Query:    1 WTPAAETFWVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSI-FPGTWILTYGAAALLMLLVEKPFMNLE 333
            W+ A    + A+ R  + ++L  ++  C +G GG+VNS L  PLW PL +LT+ AYL+H PI+ +L+ S E    Y S  LTS  F G  +++YG AA+L L++E P + LE
Sbjct:  508 WSRAGNILYEAFCRFAWGVSLTWVIFACHYGYGGWVNSFLGHPLWAPLGRLTYTAYLLH-PIMILLFISHEGTVMYLSIALTSFYFAGITLISYGCAAILSLMLEFPLVGLE 618          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: A0A8B7ZCH4_ACAPL (nose resistant to fluoxetine protein 6-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZCH4_ACAPL)

HSP 1 Score: 84.7 bits (208), Expect = 9.920e-17
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   13 AETFWVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLE 333
            A   +  +SRP F  A+  +   C+ G GG VNS+L+  +W PL++LT+GAYL+H  I+  +Y S  A + ++      +F    IL YGAA LL + VE PFM LE
Sbjct:  387 AAVLYTVFSRPAFVTAVGWVAFACVMGYGGPVNSLLSWGVWAPLSRLTYGAYLLHSTILYTIYTSSNAQYHFSYMQWVCMFLANMILAYGAAFLLSIGVEGPFMGLE 493          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: A0A8B7ZHE0_ACAPL (nose resistant to fluoxetine protein 6-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZHE0_ACAPL)

HSP 1 Score: 80.9 bits (198), Expect = 2.310e-15
Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   13 AETFWVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLE 333
            A   +  +SRP F + +  +   C+ G GG VNS+L+  +W PL++LT+GAYL+H  I+ V+Y S    + ++      +F    IL YGAA ++ + VE PFM LE
Sbjct:  433 AAVLYTVFSRPAFVMTVGWVAFACVVGYGGPVNSLLSWGVWAPLSRLTYGAYLLHSIILYVIYTSSNVQYHFSYMEWVCLFLANLILAYGAAFIMSIGVEGPFMGLE 539          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: A0A7S2MU52_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MU52_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 2.460e-15
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 1
Query:    1 WTPA--AETFWVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLEA 336
            W P   A   ++ + R ++ +  A     C   A G +++ L+A LW PLA+LT+GAYL H  +I VL G+  A + ++   LTS +    +L Y  AA   LLVEKPFMNLEA
Sbjct:   25 WAPGGIANRLYLTFGRGLWGVGCAFFSVCCFAEATGSISAFLSAGLWAPLARLTYGAYLTHPIVIKVLSGAATAFYDWSYVDLTSRWLLNSLLAYALAAGAFLLVEKPFMNLEA 138          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: UPI001CF1DE3E (nose resistant to fluoxetine protein 6-like n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF1DE3E)

HSP 1 Score: 80.1 bits (196), Expect = 4.460e-15
Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 1
Query:   49 FSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREA-AFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNL 330
            +SLALA ++  C  G GG VNSIL+AP W PL++LT+ AYLIH+ +++V  GS E+ A +Y+   +   F G   LTYG A +L + VE P + L
Sbjct:  604 WSLALAWVIFACHRGLGGLVNSILSAPFWTPLSRLTYCAYLIHLILLSVRTGSLESLANTYSDIHVAFTFAGVVTLTYGIAFILCVCVEYPMIEL 698          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: A0A553P3L9_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553P3L9_TIGCA)

HSP 1 Score: 79.0 bits (193), Expect = 1.160e-14
Identity = 35/113 (30.97%), Postives = 66/113 (58.41%), Query Frame = 1
Query:   22 FWVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLEAMVMKSKSK 360
            F+ A+SR  +++ ++ ++  C  G  GF+  +L  PLW PL+++T+  YLIH+P+I   + SR++   ++ F +  +F G  I++   +  L L+ E PF+ LE ++     K
Sbjct:  729 FFAAFSRLAWAIGISWVIFACQTGYAGFIGHVLGYPLWNPLSRMTYECYLIHLPMIYAFHKSRKSVMYFDKFFMFYVFMGHLIVSVILSVFLTLMFESPFIGLEKLLFSGPQK 841          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: UPI00201F1CC6 (nose resistant to fluoxetine protein 6-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F1CC6)

HSP 1 Score: 78.6 bits (192), Expect = 1.560e-14
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 1
Query:   40 RPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLE 333
            RP ++L ++ ++ VC  G GG VNSIL+   W P+ +LT+GAYL+H+ ++T    +R     Y+   L+  F GTW +TYG + +  +LVE P + +E
Sbjct:  683 RPAWALCVSWMILVCCSGCGGIVNSILSWKAWIPVGRLTYGAYLLHVMVLTNHQANRRTPAYYSIEHLSYQFLGTWSITYGLSFIFAVLVEAPCLGIE 780          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: UPI0003F0AFDB (nose resistant to fluoxetine protein 6-like n=2 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0AFDB)

HSP 1 Score: 78.2 bits (191), Expect = 2.100e-14
Identity = 39/110 (35.45%), Postives = 67/110 (60.91%), Query Frame = 1
Query:   25 WVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLEAMVMKSK 354
            ++  SRP ++ AL  +   C+ G GG VN+IL+  +W PL++LTF AY+IH+P+I + Y SR+    Y+ + L  +  G  +LT+  A  + + +E P +  E +++K K
Sbjct:  594 YITLSRPAWAAALGWMTIACVTGYGGPVNTILSWRIWIPLSRLTFSAYMIHLPVIAMCYYSRDRLLFYDVYNLVYLVLGGIVLTFSVAFAISVFLESPTIGWEKILLKRK 703          
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Match: UPI0003F0B02F (nose resistant to fluoxetine protein 6-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0B02F)

HSP 1 Score: 77.8 bits (190), Expect = 2.700e-14
Identity = 40/106 (37.74%), Postives = 66/106 (62.26%), Query Frame = 1
Query:   37 SRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAKLTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLMLLVEKPFMNLEAMVMKSK 354
            SRP +++AL  +   C+ G GG VN+IL+  +W PL++LTF AY+IH+P+I + Y SR+    Y+ + L  +  G  +LT+  A  + + +E P +  E +V+K K
Sbjct:  389 SRPAWAVALGWMTIACVTGYGGPVNAILSWKIWIPLSRLTFSAYMIHLPVIAMGYMSRDRLLFYDVYNLVYLVLGGILLTFTVAFAISVFLENPTIGWEKIVLKRK 494          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75482.17808.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001EE622297.520e-1940.78nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
A0A2G8JP07_STIJA3.050e-1741.07Putative nose resistant to fluoxetine protein 6 n=... [more]
A0A8B7ZCH4_ACAPL9.920e-1741.12nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
A0A8B7ZHE0_ACAPL2.310e-1538.32nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
A0A7S2MU52_9EUKA2.460e-1540.35Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
UPI001CF1DE3E4.460e-1546.32nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
A0A553P3L9_TIGCA1.160e-1430.97Uncharacterized protein n=1 Tax=Tigriopus californ... [more]
UPI00201F1CC61.560e-1438.78nose resistant to fluoxetine protein 6-like n=1 Ta... [more]
UPI0003F0AFDB2.100e-1435.45nose resistant to fluoxetine protein 6-like n=2 Ta... [more]
UPI0003F0B02F2.700e-1437.74nose resistant to fluoxetine protein 6-like n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig75482contigM-pyrifera_M_contig75482:150..512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score84.0
Seed ortholog evalue5.4e-14
Seed eggNOG ortholog400682.PAC_15723587
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Transferase activity, transferring acyl groups other than amino-acyl groups
EggNOG OGs38GB4@33154,3BE7Z@33208,KOG3700@1,KOG3700@2759
COG Functional cat.I
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size363
Cds size363
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816652.8005795-CDS-M-pyrifera_M_contig75482:149..5121622816652.8005795-CDS-M-pyrifera_M_contig75482:149..512Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75482 150..512 +
1692278100.1442904-CDS-M-pyrifera_M_contig75482:149..5121692278100.1442904-CDS-M-pyrifera_M_contig75482:149..512Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig75482 150..512 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig75482.17808.1prot_M-pyrifera_M_contig75482.17808.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig75482 150..512 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig75482.17808.1

>prot_M-pyrifera_M_contig75482.17808.1 ID=prot_M-pyrifera_M_contig75482.17808.1|Name=mRNA_M-pyrifera_M_contig75482.17808.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
WTPAAETFWVAWSRPIFSLALATIVGVCMWGAGGFVNSILAAPLWQPLAK
LTFGAYLIHIPIITVLYGSREAAFSYNSFLLTSIFPGTWILTYGAAALLM
LLVEKPFMNLEAMVMKSKSK*
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mRNA from alignment at M-pyrifera_M_contig75482:150..512+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75482.17808.1 ID=mRNA_M-pyrifera_M_contig75482.17808.1|Name=mRNA_M-pyrifera_M_contig75482.17808.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=363bp|location=Sequence derived from alignment at M-pyrifera_M_contig75482:150..512+ (Macrocystis pyrifera P11B4 male)
TGGACTCCAGCAGCTGAAACCTTCTGGGTCGCATGGTCAAGGCCTATTTT CTCCCTCGCCCTTGCAACAATTGTTGGAGTGTGCATGTGGGGTGCTGGCG GGTTTGTCAACTCAATTCTGGCCGCACCGTTGTGGCAACCCCTTGCAAAG CTTACGTTTGGTGCATACCTCATCCACATTCCTATCATAACAGTGCTCTA CGGATCCAGAGAAGCAGCGTTCTCCTACAACTCCTTCCTTCTCACCTCCA TCTTTCCTGGAACGTGGATCCTCACCTATGGAGCAGCTGCACTCCTTATG CTCCTCGTTGAAAAGCCTTTTATGAATTTGGAAGCCATGGTTATGAAATC AAAATCAAAATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig75482:150..512+

>mRNA_M-pyrifera_M_contig75482.17808.1 ID=mRNA_M-pyrifera_M_contig75482.17808.1|Name=mRNA_M-pyrifera_M_contig75482.17808.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig75482:150..512+ (Macrocystis pyrifera P11B4 male)
TGGACTCCAGCAGCTGAAACCTTCTGGGTCGCATGGTCAAGGCCTATTTT
CTCCCTCGCCCTTGCAACAATTGTTGGAGTGTGCATGTGGGGTGCTGGCG
GGTTTGTCAACTCAATTCTGGCCGCACCGTTGTGGCAACCCCTTGCAAAG
CTTACGTTTGGTGCATACCTCATCCACATTCCTATCATAACAGTGCTCTA
CGGATCCAGAGAAGCAGCGTTCTCCTACAACTCCTTCCTTCTCACCTCCA
TCTTTCCTGGAACGTGGATCCTCACCTATGGAGCAGCTGCACTCCTTATG
CTCCTCGTTGAAAAGCCTTTTATGAATTTGGAAGCCATGGTTATGAAATC
AAAATCAAAATGATGGACTCCAGCAGCTGAAACCTTCTGGGTCGCATGGT
CAAGGCCTATTTTCTCCCTCGCCCTTGCAACAATTGTTGGAGTGTGCATG
TGGGGTGCTGGCGGGTTTGTCAACTCAATTCTGGCCGCACCGTTGTGGCA
ACCCCTTGCAAAGCTTACGTTTGGTGCATACCTCATCCACATTCCTATCA
TAACAGTGCTCTACGGATCCAGAGAAGCAGCGTTCTCCTACAACTCCTTC
CTTCTCACCTCCATCTTTCCTGGAACGTGGATCCTCACCTATGGAGCAGC
TGCACTCCTTATGCTCCTCGTTGAAAAGCCTTTTATGAATTTGGAAGCCA
TGGTTATGAAATCAAAATCAAAATGA
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