Homology
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
UPI0006B0F883 (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0F883)
HSP 1 Score: 133 bits (334), Expect = 1.160e-30
Identity = 89/219 (40.64%), Postives = 131/219 (59.82%), Query Frame = 1
Query: 310 AAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQ-KLAAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
AA IQ VR +L R+ LA++ ++AT LQA W+G R L Q K +R+ ANA ATED KL NRT +AL + R + ++ A LDV TRLS CC ++ E AV I+F++IRSCNRSLPHM+L++ S NIL NL+ D+ + + +L TL+DLM++Y + +F + +L Q +A +K+NK + +I+S+ L R+
Sbjct: 2691 AASIIQTQVRLWLVRRRLAKQHDSATVLQAAWRGHLQRCKLKSRQLKTIRDRLKTANANATEDKKLCNRTASALDFLLRCRNLSYILSALMHLDVVTRLSASCCEKIAEGSAVEILFQLIRSCNRSLPHMELIKYSTNILLNLA-KYDKTVDSVWTVIGSLDTLLDLMRIYREKGEAIFSKVCTLLWIFFQDPEKASVMKSNKNVIDKIKSLHYLTCRR 2908
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A8J1UEI4_OWEFU (Ofus.G131179 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1UEI4_OWEFU)
HSP 1 Score: 132 bits (332), Expect = 2.090e-30
Identity = 85/254 (33.46%), Postives = 155/254 (61.02%), Query Frame = 1
Query: 241 RWMRERIGRV------------QLAWKAKYAVKTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQ-KLAAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
RW+R ++ RV Q+ +A+ + + AAA+ +Q R +L ++ ++ +AATK+Q+ W+G K+R+ ++ +A +R+ EA ATE+ KLVNRT++AL + +++ +++A LDV+T+LS CC R+VE +AV +++ +I+SCNRSLPHM++++ ++IL NL+ D+ + ++ +++ L++LMQ+Y E+ +F +L LG + R ++I V ++QS VL RK
Sbjct: 2162 RWLRAKLERVHYLKLVRGVRQLQVVVRARLSHRNAAAITLQAAARVWLAKRHVSRMHKAATKIQSIWRGRKLRNEQKNKKITVARKRIEEATRNATEEKKLVNRTSSALDYLLQYKQLSYILEAVMHLDVATKLSSRCCERMVEGNAVCVLYTLIKSCNRSLPHMEIIKFCVSILLNLA-KYDKTVDAVLEVEDSISVLLELMQIY-REKGVIFNNCCLILTILGSDKLRKEQICKVPHCVEKLQSFYVLTARK 2413
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A1S3KBD7_LINUN (abnormal spindle-like microcephaly-associated protein homolog n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KBD7_LINUN)
HSP 1 Score: 132 bits (332), Expect = 2.140e-30
Identity = 87/240 (36.25%), Postives = 142/240 (59.17%), Query Frame = 1
Query: 247 MRERIGRVQLAWKAKYAVKTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQKLAA-ERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
+R I R+Q + + A + AA +IQ VRG+ R+ + Q+A +QA W+G K R + +++ + +R+ EA ATE+ KL NRTT+AL + +++ +++A LD +TRLS CC R+VE +AV +I+ +IRSCNRSLPHM++++ S+NIL NL+ D+ + + ++ TLV+LMQ+Y + +F + ++ L Q AR + I R++SI L RK
Sbjct: 2915 LRAGITRLQSVVRQRLACRHQAATSIQALVRGWQGRRQAQKWQDAIVTIQAVWRGRKTRRQMKDKKVIQVRKRLKEATMAATEEKKLCNRTTSALDFLLQYKQLSYILEALVHLDAATRLSSRCCERMVEGNAVGVIYTLIRSCNRSLPHMEIIKYSVNILLNLA-KYDKTRQAVYQVEDSVDTLVELMQIYRDKGSSIFCKVCTLMGILCQDRARREEILKLPKMSDRLRSIHTLTLRK 3153
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A8J1U165_OWEFU (Ofus.G083170 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U165_OWEFU)
HSP 1 Score: 132 bits (332), Expect = 2.180e-30
Identity = 85/254 (33.46%), Postives = 154/254 (60.63%), Query Frame = 1
Query: 241 RWMRERIGRV------------QLAWKAKYAVKTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQ-KLAAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
RW+R ++ RV Q+ +A+ + + AAA+ +Q R +L ++ ++ +AATK+Q W+G K+R+ ++ +A +R+ EA ATE+ KLVNRT++AL + +++ +++A LDV+T+LS CC R+VE +AV +++ +I+SCNRSLPHM++++ ++IL NL+ D+ + ++ +++ L++LMQ+Y E+ +F +L LG + R ++I V ++QS VL RK
Sbjct: 3821 RWLRAKLERVHYLKLVRGVRQLQVVVRARLSHRNAAAITLQAAARVWLAKRQVSRMHKAATKIQCIWRGRKLRNEQKNKKITVARKRIEEATRNATEEKKLVNRTSSALDYLLQYKQLSYILEAVMHLDVATKLSSRCCERMVEGNAVCVLYTLIKSCNRSLPHMEIIKFCVSILLNLA-KYDKTVDAVLEVEDSISVLLELMQIY-REKGVIFNNCCLILTILGSDKLRKEQICKVPHCVEKLQSFYVLTARK 4072
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A2T7NKL5_POMCA (Uncharacterized protein n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NKL5_POMCA)
HSP 1 Score: 127 bits (318), Expect = 1.500e-28
Identity = 83/219 (37.90%), Postives = 133/219 (60.73%), Query Frame = 1
Query: 310 AAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQKLAAER-VMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
AA IQ+ +R + + + K+QA W+G ++R S+S + +A R V+EAN ATE+ KL NRT +AL + +++ ++++ LDV+TRLS VCC RLVE +AV +I+++I SCNRSLPHM++++ +NIL NL+ A V P+++ T+V+LM +Y + +F + +L LG+ R I A K V ++QS+ L+ RK
Sbjct: 3338 AARVIQRALRKWHKSQEEKRRERLVIKIQATWRGHRLRRSISNRKIASARRRVLEANEAATEEKKLGNRTASALDFLLRYKQLAYILESVMHLDVATRLSPVCCERLVEVNAVGVIYRLILSCNRSLPHMEVIKFCVNILLNLAKYEKTTAAV-YEVPESVGTIVELMSIYREKGGIIFSKCCMLLAILGREPQRRTEIVAVKKVVEKLQSLHSLVVRK 3555
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
UPI0018D70FAC (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D70FAC)
HSP 1 Score: 126 bits (317), Expect = 2.030e-28
Identity = 87/224 (38.84%), Postives = 134/224 (59.82%), Query Frame = 1
Query: 295 AVKTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQKLAAE-RVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
AV+ AAV IQ R +L R+ + + + AA +Q+ W+G KVR S ++ AA R ++AN TE+ KL NRTT+AL + R+M +++A +LDV +RLS CC RLVE AV +IF +I+SCNRSLP M++++ S+NIL NL+ A + P++++ ++DLMQ+Y + ++F + ++ L Q RAQ I + R+ I L RK
Sbjct: 3178 AVRQQAAVCIQTQARVWLARQYVKKMKAAALTMQSVWRGLKVRRSCKNKKIAAARARCIKANKAVTEEKKLCNRTTSALDYLLQYRQMSGLLEALISLDVVSRLSAACCERLVEGQAVPVIFTLIKSCNRSLPCMEVIKYSVNILLNLTKYPPT-AHAVFEEPESISMILDLMQMYREKGAQIFSKVCTLMGILSQDTRRAQIILSAPKNKERLLGINRLTERK 3400
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A1Y2GU93_9FUNG (Uncharacterized protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GU93_9FUNG)
HSP 1 Score: 126 bits (316), Expect = 2.560e-28
Identity = 88/216 (40.74%), Postives = 125/216 (57.87%), Query Frame = 1
Query: 322 IQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQKLAAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVL--HGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
+Q +RG L R+ +Q A K+Q+WW+G VR + + K A +R+ ANA A E MKL NRTT AL + ++ V++AC LDV TRLS C RLVE + V IIF++I+SCNRS PHM++L+ LNI+ NLS D + V P + LVD Q Y E VF V +L H L Q E+R + ++A V +++ + ++ RK
Sbjct: 1596 MQTQIRGVLARQKFHHQQAAVLKVQSWWRGHLVRRDCNAKIKAARKRIEYANATAEEHMKLGNRTTMALEILLSSGQLSAVLKACYHLDVVTRLSKNSCLRLVEHNVVNIIFQLIKSCNRSQPHMEVLKHGLNIIENLSRDRDTIDSVFWA-PGGIEILVDSAQAY-RENEMVFESVVTILLIH-LEQDESRRRIVRAMVPEVKKLKGVLTVMERK 1808
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A8B7YMX4_ACAPL (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YMX4_ACAPL)
HSP 1 Score: 122 bits (306), Expect = 5.630e-27
Identity = 109/331 (32.93%), Postives = 171/331 (51.66%), Query Frame = 1
Query: 70 AAKDYAEANKRIXXXXXXTRTFLARKHLRETFEKRDEAAVRIMEWYKKRK-------EVQSTEI--RWMRERIGRV------------QLAWKAKYAVKTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQKLAAE-RVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRKRTTRAAQVPRK 996
AA+ EA ++ + +AR HL +A+RI Y+ K ++QS I RWMR + R+ Q + A++ AAV IQ R +L R+ + + + AA +Q+ W+G VR S ++ AA R ++AN TE+ KL NRT +AL + R+M +++A +LDV +RLS CC RLVE AV +IF +IRSCNRSLP M++++ S+NIL NL+ A + P++++ ++DLMQ+Y + +F + +L L Q RA+ I + R+ I+ L RK + A + K
Sbjct: 2901 AARKILEAQRQARLAQLERFSSVARFHL---------SAIRIQHRYRMYKMCQAAKAKMQSIRIIQRWMRATLQRLHFLKLRRSIIALQRRVRQHQALRQRAAVRIQAQARVWLARQYVRKMKAAALTVQSAWRGLHVRRSCKSKKIAAARARCIKANKAVTEEKKLCNRTASALDYLLQYRQMSGLLEALISLDVVSRLSAACCERLVEGQAVPVIFTLIRSCNRSLPCMEVIKYSVNILLNLTKYPPT-AHAVFEEPESVSIILDLMQMYREKGTPIFCKVCMLLGTLAQDPRRAKIILSAPKNKERLVGIKRLTERKHSLEAKRAQAK 3221
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
A0A210QLT1_MIZYE (Abnormal spindle-like microcephaly-associated protein-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QLT1_MIZYE)
HSP 1 Score: 122 bits (305), Expect = 7.690e-27
Identity = 92/264 (34.85%), Postives = 149/264 (56.44%), Query Frame = 1
Query: 241 RWMRERIGR------------VQLAWKAKYAVKTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSL-SEEQKLAAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRKRTTRAAQVPR 993
RWMR ++ R VQ + + AA + +Q VRG+L R+++ ++++A LQA W+G +VR + S++ + + + EA ATED KL NRT +AL + +++ +++A L+ STRLS CC+R+V +AV +I+++I+SCNRS PHM+++R S+NIL NL+ A V A L++LMQVY E+ +F + ++ LG E + Q I +K S++ SI L RK A++ R
Sbjct: 3441 RWMRAKLARMQFLRFISAVKVVQTRARKHLHFRNAAVIKLQAVVRGWLGRRSVIHQEQSAITLQAIWRGRRVRKTYPSKKLENIRKNLKEATKIATEDRKLGNRTESALDYLLKYKQLSQILEALIHLETSTRLSPACCQRMVNVNAVGVIYRLIQSCNRSQPHMEIIRYSINILLNLAKYERTRAAV-YEVDGATECLLELMQVY-REKGHIFSCSCTLMGILGMMEDKRQVILNDKKVTSKLLSIYTLTARKHKITEARLIR 3702
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Match:
UPI001EE6194E (LOW QUALITY PROTEIN: abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE6194E)
HSP 1 Score: 120 bits (302), Expect = 1.910e-26
Identity = 79/193 (40.93%), Postives = 119/193 (61.66%), Query Frame = 1
Query: 388 KLQAWWKGEKVRHSLS-EEQKLAAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTRLSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASDELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQRIKANKTAVSRIQSIQVLLGRK 963
+LQA W+G + R +++ ++ + A R EA+ ATED KL NRTT+AL + + + +++A LDV+TRLS CC+RLVE AV +I+++IRSCNRSLPHM+L++ S+NIL NL+ + V H ++ LVDLMQ+Y + +F + +L L R Q I + +I+SIQ L+ RK
Sbjct: 3618 RLQAVWRGYRARKNITCKKIRRARARCHEASQNATEDKKLGNRTTSALDYLLEYKSLSHILEALMHLDVATRLSPRCCQRLVEVHAVHVIYRLIRSCNRSLPHMELIKYSVNILLNLAKYDKTVNAV--HDVESTDILVDLMQIYREKGSAIFAKTCSLLGILALDPHRRQEILQQTKLMEKIRSIQSLVSRK 3808
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75319.17778.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90 )
Total hits: 25
0 1 Expect = 1.16e-30 / Id = 40.64 Expect = 2.09e-30 / Id = 33.46 Expect = 2.14e-30 / Id = 36.25 Expect = 2.18e-30 / Id = 33.46 Expect = 1.50e-28 / Id = 37.90 Expect = 2.03e-28 / Id = 38.84 Expect = 2.56e-28 / Id = 40.74 Expect = 5.63e-27 / Id = 32.93 Expect = 7.69e-27 / Id = 34.85 Expect = 1.91e-26 / Id = 40.93 Sequence UPI0006B0F883 A0A8J1UEI4_OWEFU A0A1S3KBD7_LINUN A0A8J1U165_OWEFU A0A2T7NKL5_POMCA UPI0018D70FAC A0A1Y2GU93_9FUNG A0A8B7YMX4_ACAPL A0A210QLT1_MIZYE UPI001EE6194E
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota
Seed ortholog score 116.3
Seed ortholog evalue 2.7e-23
Seed eggNOG ortholog 529818.AMSG_01323T0
Preferred name ASPM
KEGG ko ko:K16743,ko:K16774
Hectar predicted targeting category mitochondrion
GOs GO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008150,GO:0008283,GO:0008284,GO:0008406,GO:0008584,GO:0009786,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030900,GO:0032501,GO:0032502,GO:0032504,GO:0036445,GO:0036449,GO:0040007,GO:0040011,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0048103,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051653,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0097150,GO:0097431,GO:0098590,GO:0098727,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1903046,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648
EggNOG free text desc. translation initiation factor activity
EggNOG OGs COG5022@1,KOG0160@2759,KOG0165@1,KOG0165@2759
COG Functional cat. Z
Best tax level Eukaryota
Best eggNOG OG NA|NA|NA
BRITE ko00000,ko03036
Exons 1
Model size 996
Cds size 996
Stop 0
Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622816651.226558-CDS-M-pyrifera_M_contig75319:46..1042 1622816651.226558-CDS-M-pyrifera_M_contig75319:46..1042 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig75319 47..1042 -
1692278099.2947152-CDS-M-pyrifera_M_contig75319:46..1042 1692278099.2947152-CDS-M-pyrifera_M_contig75319:46..1042 Macrocystis pyrifera P11B4 male CDS M-pyrifera_M_contig75319 47..1042 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75319.17778.1
>prot_M-pyrifera_M_contig75319.17778.1 ID=prot_M-pyrifera_M_contig75319.17778.1|Name=mRNA_M-pyrifera_M_contig75319.17778.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=332bp
VRREFLRQKKAATLLQALQRQRIAAKDYAEANKRITLLQAATRTFLARKH LRETFEKRDEAAVRIMEWYKKRKEVQSTEIRWMRERIGRVQLAWKAKYAV KTAAAVAIQKHVRGFLDRKALAEEQEAATKLQAWWKGEKVRHSLSEEQKL AAERVMEANARATEDMKLVNRTTTALRCIQHERKMRLVIQACEALDVSTR LSLVCCRRLVEEDAVTIIFKMIRSCNRSLPHMQLLRVSLNILFNLSVASD ELAEVIMHHPKALATLVDLMQVYYTEQPEVFVRAVHVLHGLGQSEARAQR IKANKTAVSRIQSIQVLLGRKRTTRAAQVPRK back to top mRNA from alignment at M-pyrifera_M_contig75319:47..1042-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig75319.17778.1 ID=mRNA_M-pyrifera_M_contig75319.17778.1|Name=mRNA_M-pyrifera_M_contig75319.17778.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig75319:47..1042- (Macrocystis pyrifera P11B4 male)GTGCGACGAGAGTTCCTTCGCCAGAAGAAGGCGGCCACTCTCCTCCAGGC
ACTGCAGAGGCAGCGCATCGCGGCCAAGGACTACGCAGAGGCCAACAAGA
GGATCACTCTGCTGCAGGCGGCCACCAGGACCTTCCTCGCACGTAAGCAT
TTGAGGGAGACCTTCGAGAAGAGGGATGAGGCTGCTGTGCGCATCATGGA
ATGGTACAAGAAGCGCAAGGAGGTGCAGAGCACTGAGATTCGATGGATGC
GAGAGCGCATTGGACGCGTGCAGCTTGCGTGGAAGGCCAAGTACGCAGTG
AAGACTGCAGCTGCTGTGGCCATCCAGAAGCACGTCCGTGGATTCCTCGA
CAGGAAGGCTCTTGCAGAGGAGCAGGAGGCCGCCACCAAGCTGCAAGCGT
GGTGGAAGGGAGAGAAGGTGCGACACTCTCTCAGCGAGGAGCAAAAGCTC
GCTGCAGAGCGTGTGATGGAGGCAAACGCCCGTGCCACCGAGGACATGAA
GCTCGTCAACCGCACCACCACCGCACTGCGCTGCATTCAGCACGAGCGCA
AGATGAGGCTCGTGATCCAGGCCTGCGAGGCACTCGACGTCTCCACGAGG
CTGTCGCTGGTCTGCTGCAGGAGACTGGTGGAGGAAGACGCAGTGACGAT
CATCTTCAAGATGATTCGGTCCTGCAACAGGTCGCTGCCCCACATGCAGC
TGCTGAGGGTGTCCCTCAACATCCTCTTCAACCTCTCTGTCGCCTCCGAC
GAGCTGGCAGAGGTGATCATGCACCACCCCAAGGCACTCGCCACTCTCGT
CGACCTCATGCAGGTGTACTACACTGAGCAGCCTGAGGTCTTTGTGAGGG
CGGTGCACGTGCTCCATGGCCTCGGCCAGAGCGAGGCACGCGCACAGCGC
ATCAAAGCCAACAAGACTGCAGTCAGCAGGATCCAGAGCATCCAGGTGTT
GCTCGGCCGCAAGCGCACCACCAGGGCCGCTCAGGTGCCGCGCAAG back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75319:47..1042-
>mRNA_M-pyrifera_M_contig75319.17778.1 ID=mRNA_M-pyrifera_M_contig75319.17778.1|Name=mRNA_M-pyrifera_M_contig75319.17778.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1992bp|location=Sequence derived from alignment at M-pyrifera_M_contig75319:47..1042- (Macrocystis pyrifera P11B4 male) GTGCGACGAGAGTTCCTTCGCCAGAAGAAGGCGGCCACTCTCCTCCAGGC ACTGCAGAGGCAGCGCATCGCGGCCAAGGACTACGCAGAGGCCAACAAGA GGATCACTCTGCTGCAGGCGGCCACCAGGACCTTCCTCGCACGTAAGCAT TTGAGGGAGACCTTCGAGAAGAGGGATGAGGCTGCTGTGCGCATCATGGA ATGGTACAAGAAGCGCAAGGAGGTGCAGAGCACTGAGATTCGATGGATGC GAGAGCGCATTGGACGCGTGCAGCTTGCGTGGAAGGCCAAGTACGCAGTG AAGACTGCAGCTGCTGTGGCCATCCAGAAGCACGTCCGTGGATTCCTCGA CAGGAAGGCTCTTGCAGAGGAGCAGGAGGCCGCCACCAAGCTGCAAGCGT GGTGGAAGGGAGAGAAGGTGCGACACTCTCTCAGCGAGGAGCAAAAGCTC GCTGCAGAGCGTGTGATGGAGGCAAACGCCCGTGCCACCGAGGACATGAA GCTCGTCAACCGCACCACCACCGCACTGCGCTGCATTCAGCACGAGCGCA AGATGAGGCTCGTGATCCAGGCCTGCGAGGCACTCGACGTCTCCACGAGG CTGTCGCTGGTCTGCTGCAGGAGACTGGTGGAGGAAGACGCAGTGACGAT CATCTTCAAGATGATTCGGTCCTGCAACAGGTCGCTGCCCCACATGCAGC TGCTGAGGGTGTCCCTCAACATCCTCTTCAACCTCTCTGTCGCCTCCGAC GAGCTGGCAGAGGTGATCATGCACCACCCCAAGGCACTCGCCACTCTCGT CGACCTCATGCAGGTGTACTACACTGAGCAGCCTGAGGTCTTTGTGAGGG CGGTGCACGTGCTCCATGGCCTCGGCCAGAGCGAGGCACGCGCACAGCGC ATCAAAGCCAACAAGACTGCAGTCAGCAGGATCCAGAGCATCCAGGTGTT GCTCGGCCGCAAGCGCACCACCAGGGCCGCTCAGGTGCCGCGCAAGGTGC GACGAGAGTTCCTTCGCCAGAAGAAGGCGGCCACTCTCCTCCAGGCACTG CAGAGGCAGCGCATCGCGGCCAAGGACTACGCAGAGGCCAACAAGAGGAT CACTCTGCTGCAGGCGGCCACCAGGACCTTCCTCGCACGTAAGCATTTGA GGGAGACCTTCGAGAAGAGGGATGAGGCTGCTGTGCGCATCATGGAATGG TACAAGAAGCGCAAGGAGGTGCAGAGCACTGAGATTCGATGGATGCGAGA GCGCATTGGACGCGTGCAGCTTGCGTGGAAGGCCAAGTACGCAGTGAAGA CTGCAGCTGCTGTGGCCATCCAGAAGCACGTCCGTGGATTCCTCGACAGG AAGGCTCTTGCAGAGGAGCAGGAGGCCGCCACCAAGCTGCAAGCGTGGTG GAAGGGAGAGAAGGTGCGACACTCTCTCAGCGAGGAGCAAAAGCTCGCTG CAGAGCGTGTGATGGAGGCAAACGCCCGTGCCACCGAGGACATGAAGCTC GTCAACCGCACCACCACCGCACTGCGCTGCATTCAGCACGAGCGCAAGAT GAGGCTCGTGATCCAGGCCTGCGAGGCACTCGACGTCTCCACGAGGCTGT CGCTGGTCTGCTGCAGGAGACTGGTGGAGGAAGACGCAGTGACGATCATC TTCAAGATGATTCGGTCCTGCAACAGGTCGCTGCCCCACATGCAGCTGCT GAGGGTGTCCCTCAACATCCTCTTCAACCTCTCTGTCGCCTCCGACGAGC TGGCAGAGGTGATCATGCACCACCCCAAGGCACTCGCCACTCTCGTCGAC CTCATGCAGGTGTACTACACTGAGCAGCCTGAGGTCTTTGTGAGGGCGGT GCACGTGCTCCATGGCCTCGGCCAGAGCGAGGCACGCGCACAGCGCATCA AAGCCAACAAGACTGCAGTCAGCAGGATCCAGAGCATCCAGGTGTTGCTC GGCCGCAAGCGCACCACCAGGGCCGCTCAGGTGCCGCGCAAG back to top