mRNA_M-pyrifera_M_contig75245.17766.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: D7FRX0_ECTSI (Dynein heavy chain family dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX0_ECTSI) HSP 1 Score: 149 bits (376), Expect = 8.430e-39 Identity = 74/151 (49.01%), Postives = 98/151 (64.90%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDLPDSGYXXXXXXXXXXXXXXARWEPAE-SDEPEYVVGVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R++G+PLD M ETH++T+ + +++ Y ARW E + +PE + G P G+L +SRLKELLP +PV+ V AVPVQ W P +VG+IR+DP ++EAPV IT FRGPT FLAT KT DP KW L G A++LQTDD Sbjct: 3767 RSTGSPLDKMTTETHISTFMEPQEV--DYYPQDGAFVSGLYIEGARWATGEEAGDPEVITGTPCAGNLVDSRLKELLPALPVVYVKAVPVQSSWEPSAVGYIRHDPKIYEAPVYITSFRGPTYVFLATLKTEDPVSKWTLTGTAVLLQTDD 3915
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A6H5KXD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD4_9PHAE) HSP 1 Score: 146 bits (369), Expect = 7.370e-38 Identity = 76/154 (49.35%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDL---PDSGYXXXXXXXXXXXXXXARWEPAE-SDEPEYVVGVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R++G+PLD M ETHV+T+ + +++ P G ARW E + EPE + G P G+L +SRLKELLP +PV+ V AVPVQ W P +VG+IR+DP ++EAPV IT FRGPT FLAT KT P KW L G A++LQTDD Sbjct: 3720 RSTGSPLDKMTTETHVSTFMEPQEVDYSPQDG-----AFVSGLYIEGARWATGEEAGEPEMITGTPCAGNLVDSRLKELLPALPVVYVKAVPVQSSWEPSAVGYIRHDPKIYEAPVYITSFRGPTYVFLATLKTEHPVSKWTLTGTAVLLQTDD 3868
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A7S1YQU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQU1_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.590e-35 Identity = 76/151 (50.33%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDLPDSGYXXXXXXXXXXXXXXARWEPAESDEPEYVV-GVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R +G LD M IETHVT+ DV ++ + Y ARW E YVV G G L +SRLKEL+PPMPVI V AVP+Q W SVGF+R DP +FE PV T FRGPT FLAT K+ P KWVL GVA++LQTD+ Sbjct: 330 RKTGLALDKMTIETHVTSMWDVSEV--NAYAEDGTYIHGLFIEGARWPKGEEASDTYVVSGTKCAGSLFDSRLKELIPPMPVIYVKAVPIQSHWEASSVGFLRGDPEIFECPVYTTSFRGPTYIFLATLKSDVPPSKWVLGGVALMLQTDN 478
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A7S4SLK3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SLK3_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.150e-34 Identity = 76/151 (50.33%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDLPDSGYXXXXXXXXXXXXXXARWEPAESDEPEYVV-GVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R +G LD M IETHVT+ DV ++ + Y ARW E YVV G G L +SRLKEL+PPMPVI V AVP+Q W SVGF+R DP +FE PV T FRGPT FLAT K+ P KWVL GVA++LQTD+ Sbjct: 754 RKTGLALDKMTIETHVTSMWDVSEV--NAYAEDGTYIHGLFIEGARWPKGEEASDTYVVSGTKCAGSLFDSRLKELIPPMPVIYVKAVPIQSHWEASSVGFLRGDPEIFECPVYTTSFRGPTYIFLATLKSDVPPSKWVLGGVALMLQTDN 902
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A836CGE4_9STRA (Dynein heavy chain family dynein heavy chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE4_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.330e-34 Identity = 74/153 (48.37%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYND---VEDLPDSGYXXXXXXXXXXXXXXARWEPA-ESDEPEYVVGVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTD 447 R +GAPLD M ETH+TT+ D + +P+ G ARW E+ + E V G PT G L +SRLKELLP +PVI V AVPVQ W P +VG++R+ +++EAP +TRFRGPT FLAT KT+ P KWVL G A+I Q D Sbjct: 3831 RKTGAPLDKMTTETHITTFTDPAQCDYVPEDG-----AFVHGLFLEGARWATGDEAGDVENVTGTPTAGMLVDSRLKELLPQLPVIYVKAVPVQPTWEPSAVGYLRHQHDVYEAPCYLTRFRGPTYVFLATLKTLAPVSKWVLTGTALIFQRD 3978
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A7S3YEA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEA8_HETAK) HSP 1 Score: 129 bits (323), Expect = 9.070e-34 Identity = 74/154 (48.05%), Postives = 92/154 (59.74%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYND---VEDLPDSGYXXXXXXXXXXXXXXARWEPAESDEPEYVVG-VPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R+ G LD M ETH+TTY D ++ +PD G ARW + E VG V T G L +SRLKELLP +PVI V AV VQ W P +VG++R+ P+++E PV +T FRGPT FLAT KT P KWVL G A+I+QTDD Sbjct: 140 RSRGFALDQMTTETHITTYYDPAGIDFVPDDGVFIHGIYIEG-----ARWPALDELEATEPVGNVSTGGVLTDSRLKELLPLLPVIYVKAVQVQPSWEPSAVGYLRHTPDVYECPVYLTSFRGPTYIFLATMKTEAPTSKWVLTGTAMIMQTDD 288
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A7S1G6P9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6P9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.150e-32 Identity = 70/154 (45.45%), Postives = 91/154 (59.09%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDLPDSGYXXXXXXXXXXXXXXARWEPAESDEPEY----VVGVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R + PLDNM ETHVT Y + + D Y ARW + D+ E V GVP G+LA+S+LK+LLP +PV+ + AV V+ W P SVG++R DP+++E PV T FRGPT FLAT T P KWV +GVAII+Q D+ Sbjct: 492 RRNNYPLDNMTTETHVTAYRSPDAVKD--YPADGAYVYGLFIEGARWNTKDEDDQEIEATDVSGVPCVGYLADSKLKQLLPALPVLYIKAVTVEPTWEPSSVGYLRGDPSIYECPVYFTTFRGPTYVFLATLATRAPVSKWVQSGVAIIMQEDE 643
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A4D9CXY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXY3_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.790e-32 Identity = 74/153 (48.37%), Postives = 94/153 (61.44%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDLP-DSGYXXXXXXXXXXXXXXARWEPAE-SDEPEYVVG-VPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R +G PLDNM IETHVTT+ E L D ARW P E + E VVG G+L +S+LKELL P+PV+ + AVPVQ W P SVG++RN P+++E PV +T RG T FLAT KTV+P KWVL G A+++Q+DD Sbjct: 4100 RQTGYPLDNMTIETHVTTFASPEQLGNDIPPPHEGAYVHGLYIEGARWTPPEEAAETVSVVGNTLVGGNLTDSKLKELLSPLPVLYIRAVPVQPTWEPSSVGYLRNQPDVYECPVYLTSARGATYIFLATLKTVEPVSKWVLTGTALLMQSDD 4252
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A7S2US96_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US96_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.680e-31 Identity = 72/154 (46.75%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDL---PDSGYXXXXXXXXXXXXXXARWEPAESDEPEYVV-GVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R SG PLD M ETHVTT + + P SG ARW + Y + G+P G L +SRLKELLP +PV+ VLAV VQ W P +VG++R+ + +E PV IT FRGPT FLAT T P KW L G AII+QTDD Sbjct: 160 RESGKPLDKMTTETHVTTIPEASTITAPPVSG-----AFVHGLFIEGARWPTGDELGDTYDLNGIPCGGSLIDSRLKELLPALPVVYVLAVEVQPHWEPSAVGYLRHRDDTYECPVYITSFRGPTYVFLATLNTEVPVSKWTLTGTAIIMQTDD 308
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Match: A0A7S2W5P0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5P0_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.750e-31 Identity = 68/151 (45.03%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 1 RNSGAPLDNMAIETHVTTYNDVEDLPDSGYXXXXXXXXXXXXXXARWEPAE-SDEPEYVVGVPTRGHLAESRLKELLPPMPVILVLAVPVQDEWLPDSVGFIRNDPNLFEAPVCITRFRGPTVTFLATRKTVDPKRKWVLAGVAIILQTDD 450 R +G PL+NM ETHVTT + + + Y ARW E ++EP+ V P G L +S LKELLP MPV+ V AV V +W + VG++RNDP ++E PV +T RGPT FLAT T P KWVL G A+I+QT D Sbjct: 162 RATGLPLNNMTNETHVTTMKEAREA--NYYPKDGMFIYGFYIEGARWSTLEEAEEPQTVGSTPCSGFLMDSHLKELLPSMPVMYVRAVEVDPQWQAEGVGYLRNDPAIYECPVYMTLARGPTYVFLATLTTQAPTHKWVLTGTALIMQTAD 310 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75245.17766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75245.17766.1 >prot_M-pyrifera_M_contig75245.17766.1 ID=prot_M-pyrifera_M_contig75245.17766.1|Name=mRNA_M-pyrifera_M_contig75245.17766.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp MAIETHVTTYNDVEDLPDSGYPESGFYTHGYYLEGARWEPAESDEPEYVVback to top mRNA from alignment at M-pyrifera_M_contig75245:1..453+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75245.17766.1 ID=mRNA_M-pyrifera_M_contig75245.17766.1|Name=mRNA_M-pyrifera_M_contig75245.17766.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig75245:1..453+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75245:1..453+ >mRNA_M-pyrifera_M_contig75245.17766.1 ID=mRNA_M-pyrifera_M_contig75245.17766.1|Name=mRNA_M-pyrifera_M_contig75245.17766.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig75245:1..453+ (Macrocystis pyrifera P11B4 male)back to top |