mRNA_M-pyrifera_M_contig75155.17749.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A812WI85_9DINO (Has1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WI85_9DINO) HSP 1 Score: 219 bits (558), Expect = 6.820e-66 Identity = 109/168 (64.88%), Postives = 138/168 (82.14%), Query Frame = 1 Query: 205 GFFSSKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILEV 708 GFFS ++F +L L T +GL +MGF MT+IQA+S+P LAGKD+LGAAKTGSGKT+AFL+P+VELL +V+ K RNGLGAL+ISPTRELA+QI+ +L E+ + H+L++GL+MGG++R EA +L KGV+ILVATPGRLLDHL T GF DNL LVIDEADRILE+ Sbjct: 106 GFFSDQTFQSLALSQPTLEGLHDMGFKLMTKIQAKSIPPLLAGKDLLGAAKTGSGKTIAFLVPVVELLHKVQWKSRNGLGALIISPTRELAVQIHNELTELCKHHQLSHGLIMGGSNRAEEARRLVKGVNILVATPGRLLDHLRTTNGFRFDNLQALVIDEADRILEI 273
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: I0Z1U3_COCSC (RNA helicase n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z1U3_COCSC) HSP 1 Score: 219 bits (558), Expect = 2.970e-65 Identity = 105/165 (63.64%), Postives = 132/165 (80.00%), Query Frame = 1 Query: 214 SSKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILEV 708 S+ FS+L L + TQ+ + EMGF MT +QA ++PH L G+DVLGAAKTGSGKT+AFL+P +ELL + + RNG GAL+ISPTRELAMQIY ++ Q H T+GL+MGGA+R+TEA+KL KGV+++VATPGRLLDHL NT+GFV NL CLVIDEADRILE+ Sbjct: 2 SASEFSSLDLTEQTQRAIAEMGFTHMTEVQARTIPHLLTGRDVLGAAKTGSGKTLAFLVPCLELLHKAKFMPRNGTGALIISPTRELAMQIYSVARDLLQHHSQTHGLIMGGANRRTEAEKLVKGVNLIVATPGRLLDHLQNTKGFVYSNLACLVIDEADRILEI 166
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A2G5BKB8_COERN (RNA helicase n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKB8_COERN) HSP 1 Score: 218 bits (556), Expect = 3.280e-65 Identity = 106/161 (65.84%), Postives = 132/161 (81.99%), Query Frame = 1 Query: 223 SFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILE 705 +FS LPL D TQK +KEMGF +MT +QA ++P LAG+DVLGAAKTGSGKT+AFLIP +ELL+++ K RNG GA++I+PTRELA+QI+ E+ QFH T+GLV+GGA+R EADKL KGV++L+ATPGRLLDHL NT+GF+ NL LVIDEADRILE Sbjct: 15 AFSTLPLSDQTQKAVKEMGFTQMTEVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPTIELLSKLRFKPRNGTGAIIITPTRELALQIFGVAHELMQFHSQTFGLVIGGANRHAEADKLTKGVNLLIATPGRLLDHLQNTQGFIFKNLKTLVIDEADRILE 175
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA) HSP 1 Score: 219 bits (559), Expect = 6.220e-65 Identity = 112/167 (67.07%), Postives = 134/167 (80.24%), Query Frame = 1 Query: 205 GFFSSKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILE 705 GFFS +FS+L L + T + L E G+ RMT+IQA+S+P L GKD+LGAAKTGSGKT+AFL+P VELL+RV RNG G +VISPTRELA+QIY L E+ + H T+GLV+GGA+R+TEA+KLAKGV+ILVATPGRLLDHL NTRGF NL LVIDEADRILE Sbjct: 53 GFFSKAAFSSLDLSEGTARALAENGYERMTKIQAKSIPPLLTGKDLLGAAKTGSGKTLAFLVPAVELLSRVRFTTRNGTGVIVISPTRELALQIYGVLRELCEHHNQTHGLVIGGANRRTEAEKLAKGVNILVATPGRLLDHLQNTRGFNFRNLQMLVIDEADRILE 219
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A1Y3N8U8_PIRSE (RNA helicase n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y3N8U8_PIRSE) HSP 1 Score: 219 bits (558), Expect = 6.480e-65 Identity = 105/163 (64.42%), Postives = 135/163 (82.82%), Query Frame = 1 Query: 220 KSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILEV 708 K F AL + T K ++EMGF +MT +QA S+P AL G+D+LGAAKTGSGKT+AFLIP++E+LAR++ K RNG G +VISPTRELA+QI+ +E+ ++H T+G+VMGGA+RK EA+KLAKGV++LV+TPGRLLDHL NT+GF+ NL CLVIDEADRILEV Sbjct: 34 KDFQALKASENTLKAIQEMGFKKMTEVQARSIPAALTGRDILGAAKTGSGKTLAFLIPVIEMLARLKFKPRNGTGVIVISPTRELALQIFGVAKELMKYHHQTFGIVMGGANRKAEAEKLAKGVNLLVSTPGRLLDHLQNTKGFIFKNLKCLVIDEADRILEV 196
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A812QUE4_9DINO (RNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QUE4_9DINO) HSP 1 Score: 224 bits (570), Expect = 2.090e-64 Identity = 109/168 (64.88%), Postives = 138/168 (82.14%), Query Frame = 1 Query: 202 DGFFSSKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILE 705 DGFFS + F +LPL + T L+E G++ MT+IQA+++P L GKDVLGAAKTGSGKT+AFLIP +E+LA+ + K RNGLGA++I+PTRELA+QIYQ L E+ K T+GL+MGGA+R+ EA+KL KGV+ILVATPGRLLDHL NT+ F+ DNL CL+IDEADRILE Sbjct: 354 DGFFSGQRFDSLPLSEGTLSALEEAGYSTMTKIQAQAIPPLLQGKDVLGAAKTGSGKTLAFLIPAMEILAKAQFKARNGLGAVIITPTRELALQIYQTLRELMGHQKQTHGLIMGGANRRNEAEKLEKGVNILVATPGRLLDHLQNTQRFLFDNLQCLIIDEADRILE 521
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A7S1UDX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDX9_9STRA) HSP 1 Score: 208 bits (530), Expect = 3.710e-64 Identity = 105/167 (62.87%), Postives = 132/167 (79.04%), Query Frame = 1 Query: 205 GFFSSKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILE 705 GFFS +FS+L L + T + L E G+ RMT+IQA+S+P L GKD+LGAAKTGSGKT+AFL+P VELL+RV RNG G +VISPTRELA+QIY L E+ + H T+GLV+GGA+R+TEA+KLAKGV+ILVATPGRLLDHL N+ +D+L LV+DE DR+LE Sbjct: 53 GFFSKAAFSSLDLSEGTARALAENGYERMTKIQAKSIPPLLTGKDLLGAAKTGSGKTLAFLVPAVELLSRVRFTTRNGTGVIVISPTRELALQIYGVLRELCEHHNQTHGLVIGGANRRTEAEKLAKGVNILVATPGRLLDHLQNSSSVHLDDLDILVLDEVDRLLE 219
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A367IQF8_RHIAZ (RNA helicase (Fragment) n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367IQF8_RHIAZ) HSP 1 Score: 210 bits (535), Expect = 7.060e-64 Identity = 99/164 (60.37%), Postives = 134/164 (81.71%), Query Frame = 1 Query: 217 SKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILEV 708 S F +L + T+ +K++GF +MT +QA ++P +AG+DVLGAAKTGSGKT+AFLIP VE+L R++ K RNG GA+++SPTRELA+QI+ +E+ ++H++T+G+V+GGA+RK EADKL KGV++LVATPGRLLDHL NTRGFV NL L+IDEADRILE+ Sbjct: 41 SYDFESLDCCERTKNAIKDLGFEKMTEVQARTIPPLMAGRDVLGAAKTGSGKTLAFLIPAVEILYRLKFKPRNGTGAVIVSPTRELALQIFGVAKELLKYHQMTFGIVIGGANRKAEADKLVKGVNLLVATPGRLLDHLQNTRGFVYKNLKALIIDEADRILEI 204
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A4Y7JEC3_PAPSO (RNA helicase n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JEC3_PAPSO) HSP 1 Score: 210 bits (534), Expect = 9.420e-64 Identity = 101/169 (59.76%), Postives = 133/169 (78.70%), Query Frame = 1 Query: 199 GDGFFSSKSFSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILE 705 G G S+++FS LPL + T K +++MGF MT+IQA S+PH L GKDVLGAA+TGSGKT+AFLIP +EL+ ++ RNG G +VI PTRELAMQ + +++ ++H T GLVMGGA+R+ EA++L +GV++LVATPGRLLDHL NT+GF+ NL CLV+DEADRILE Sbjct: 91 GSGIMSTEAFSNLPLSEPTMKAIEDMGFQHMTQIQARSIPHLLEGKDVLGAARTGSGKTLAFLIPAIELMHCLKFSPRNGTGVIVICPTRELAMQSHAVAKDLLKYHSQTVGLVMGGAARRGEAERLVRGVNLLVATPGRLLDHLQNTKGFIFKNLKCLVVDEADRILE 259
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Match: A0A2N1JEW5_9BASI (RNA helicase n=1 Tax=Malassezia vespertilionis TaxID=2020962 RepID=A0A2N1JEW5_9BASI) HSP 1 Score: 216 bits (549), Expect = 1.420e-63 Identity = 107/161 (66.46%), Postives = 131/161 (81.37%), Query Frame = 1 Query: 226 FSALPLLDATQKGLKEMGFNRMTRIQAESVPHALAGKDVLGAAKTGSGKTMAFLIPIVELLARVEPKRRNGLGALVISPTRELAMQIYQQLEEVAQFHKLTYGLVMGGASRKTEADKLAKGVSILVATPGRLLDHLNNTRGFVVDNLMCLVIDEADRILEV 708 FS L L DAT +GLKEMGF MT +QA +P LAGKDVLGAA+TGSGKT+AFLIP+V++L R++ K RNG GA+VISPTRELA+QI+ +E+ + H T G+VMGGA+RK EADKL KGV++++ATPGRLLDHL NT+GFV NL LVIDEADRILE+ Sbjct: 34 FSTLDLSDATARGLKEMGFQTMTEVQARCIPPLLAGKDVLGAAQTGSGKTLAFLIPVVDMLYRLKFKPRNGTGAIVISPTRELALQIFGVAKELMEHHSQTLGIVMGGANRKAEADKLQKGVNLIIATPGRLLDHLQNTKGFVFSNLKTLVIDEADRILEI 194 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig75155.17749.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig75155.17749.1 >prot_M-pyrifera_M_contig75155.17749.1 ID=prot_M-pyrifera_M_contig75155.17749.1|Name=mRNA_M-pyrifera_M_contig75155.17749.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=236bp EKKEKKEKKEKKEKKEKRKEEEGSGEGEEGGGDGDGEEGGGEGSGDDGEAback to top mRNA from alignment at M-pyrifera_M_contig75155:1..708- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig75155.17749.1 ID=mRNA_M-pyrifera_M_contig75155.17749.1|Name=mRNA_M-pyrifera_M_contig75155.17749.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig75155:1..708- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig75155:1..708- >mRNA_M-pyrifera_M_contig75155.17749.1 ID=mRNA_M-pyrifera_M_contig75155.17749.1|Name=mRNA_M-pyrifera_M_contig75155.17749.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1416bp|location=Sequence derived from alignment at M-pyrifera_M_contig75155:1..708- (Macrocystis pyrifera P11B4 male)back to top |