mRNA_M-pyrifera_M_contig74979.17714.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74979.17714.1
Unique NamemRNA_M-pyrifera_M_contig74979.17714.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: A0A7J7JEC6_BUGNE (GNS n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JEC6_BUGNE)

HSP 1 Score: 221 bits (563), Expect = 1.350e-65
Identity = 110/246 (44.72%), Postives = 145/246 (58.94%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNK--PFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLAREQDYTKMDENAAEW 732
            VFILTDDQD+ L     M + R  +   G  F     + P+CCPSRSS++TGQY HN  A+NNS+ GNC+  +W++GPE   F   L   GY T + GKYLNQYGM   GGL HIP GWD         W GLKGNS+Y NY +S  G AE HG+D+ ADY   +I+ +   F+   + ++K  PFF + STPSCH    P P+Y+Q     +APR P++   + D HW+ R Q  T M   + +W
Sbjct:   24 VFILTDDQDVFLNGTGPMSKLRQYVSSQGATFSNMFVTTPLCCPSRSSILTGQYVHNHKAINNSVDGNCSSPSWQKGPETQTFVTYLKKSGYTTFFAGKYLNQYGMDETGGLSHIPPGWDH--------WNGLKGNSQYYNYVVSANGKAEKHGSDYKADYFTDVINRKATDFLNRQLGKSKDEPFFMMLSTPSCHAPFTPAPQYSQNFSKMSAPRTPSFNTKSTDKHWILR-QVKTPMGNASMQW 260          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: A0A2C9LAN5_BIOGL (Sulfatase domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LAN5_BIOGL)

HSP 1 Score: 214 bits (546), Expect = 1.540e-65
Identity = 108/243 (44.44%), Postives = 144/243 (59.26%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLAREQDYTKMDENAAE 729
            V ILTDDQD+ L     MP+T+  + + G  F     S P+CCPSRSS++TGQ+ HN +  NNS  GNC+  +W+   E+  F   L A GY T + GKYLN+YG P AGG+ H+P GWD         W GL GNS Y NYTLS QG AE+HG ++  DYL  +IH + ++F+  +VS  KPFF + STP+CHQ     P+Y Q   +  APR  ++ +   D HWL  E+  T M  +  E
Sbjct:   29 VLILTDDQDVALFGQYPMPKTKQLIADAGMTFTNMFVSSPLCCPSRSSILTGQFVHNHMVTNNSQSGNCSSTSWQSSAEKKTFPVYLQANGYKTFFAGKYLNEYGSPQAGGVAHVPPGWDD--------WNGLVGNSVYYNYTLSVQGQAESHGDNYQQDYLTDVIHRKAVNFLN-SVSSRKPFFMMLSTPACHQPFTSAPQYLQNFTDRKAPRTKHFNIHGKDKHWLV-EKTITPMPNDTVE 261          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: F2UPU2_SALR5 (Sulfatase domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UPU2_SALR5)

HSP 1 Score: 217 bits (553), Expect = 2.800e-64
Identity = 107/231 (46.32%), Postives = 138/231 (59.74%), Query Frame = 1
Query:    4 FILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLAREQ 696
            F+LTDDQD+ +G +S  P+  +   + G     A  S PVCCPSR+ + TG+Y HN    NNSIPGNC+  AW++G E+ N G  +   GY T Y GKYLNQYG P+AGG++H+P GWD         W  L GNS Y +Y +SN G  E+HG      YLP L+ ++T  F++     + PFF +  TPSCH    P P+YA LLPNATAPR PNY     D HW   +Q
Sbjct:   34 FLLTDDQDVDMGFVS-QPKLVSLWQKQGATLEAAFASTPVCCPSRAGIQTGRYIHNVPMTNNSIPGNCSSTAWQQGAERHNIGHLMKQAGYTTMYTGKYLNQYGAPSAGGVQHVPRGWDN--------WQALVGNSVYYDYVISNNGTPESHGNT----YLPNLLLDKTSDFLRTLEGTDDPFFIMVGTPSCHDPTEPAPEYAHLLPNATAPRPPNYGKAFRDKHWFVAKQ 251          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: E4WS04_OIKDI (Sulfatase domain-containing protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4WS04_OIKDI)

HSP 1 Score: 216 bits (549), Expect = 8.760e-64
Identity = 107/245 (43.67%), Postives = 148/245 (60.41%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRV-PNYRVPNADSHWLAREQDYTKMDENAAEW 732
            VFILTDD D+ +G M+ + +TR  L + G  F     S P+CCPSRS+++TG+YQHNT  LNN+I GNC+  AW++  E  + GA+L   GY T Y GKYLN YG   AGG+EH+P GWD         W  L GNS+Y NY++S  G  E HG +F  DYL  L+ N +++FI  A+  + PFF + + P+ H+    +PKYA L  N TAPR    + +  AD+HW+ R      M + + +W
Sbjct:   22 VFILTDDLDVAMGGMTPLEKTRRLLGDAGATFTNVFASTPICCPSRSTILTGRYQHNTKVLNNTIDGNCSSPAWQQNMEPSSIGAKLQPLGYKTFYAGKYLNMYGFKKAGGVEHVPKGWDS--------WNALVGNSRYYNYSISRNGKEEKHGDNFTLDYLTNLVANDSVNFIN-AMKPDSPFFMIVAPPAPHEPWDSDPKYADLYKNLTAPRDNKQWNIHRADAHWVVRNVP-NPMSQKSTDW 256          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: UPI0014255DD6 (N-acetylglucosamine-6-sulfatase-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014255DD6)

HSP 1 Score: 216 bits (549), Expect = 9.580e-64
Identity = 107/230 (46.52%), Postives = 145/230 (63.04%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLAR 690
            V ILTDDQD+ + +M+ M +T   + + G  F     S P+CCPSRSS++TG+Y HN  ++NNS+ GNC+ ++W++GPE+  F   L ++GY+T   GKYLN+YG PAAGG+EHIP GWD         W GL  NS Y NYTLS  G AEAH  D+  DYL  +I NR++ F+    S +KPFF +ASTP+CH      P+Y +   +  APR P++     D HWL R
Sbjct:   31 VLILTDDQDVTMDAMTPMEKTLKLIGDNGVTFSNMFTSSPLCCPSRSSILTGKYVHNHGSVNNSLEGNCSSKSWQQGPEKSTFATYLKSQGYVTFMAGKYLNRYGEPAAGGVEHIPPGWDW--------WIGLVKNSVYYNYTLSVNGTAEAHHDDYEKDYLTDVIKNRSLEFLDKRDS-SKPFFLMASTPACHSPFDSAPQYEEEFKDKNAPRGPSFNKHGGDKHWLIR 251          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: T1JN66_STRMM (Sulfatase domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JN66_STRMM)

HSP 1 Score: 216 bits (550), Expect = 1.230e-63
Identity = 105/232 (45.26%), Postives = 139/232 (59.91%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFI-KYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLARE 693
            +FIL+DDQD+ +G +  M +T+  + E G  F  A  S P+CCPSRSS++TG Y HN   +NNS+  NC+   W+ GPE   +   +  + Y+T Y GKYLNQYG   AGG++HIPAGWD         W+GL GNS+Y NYTLS  G AE HG     DYL  +I+ R   F+ +Y    +KPF  V +TP+CH    P PKY    PN  APR  N+ + + D HWL R+
Sbjct:   28 LFILSDDQDVTIGGLKPMAKTKKLITEKGLTFTNAFASTPICCPSRSSILTGLYLHNHGVVNNSLH-NCSSSLWQNGPELRTYATYVKKQNYMTFYAGKYLNQYGFIKAGGVKHIPAGWDH--------WYGLVGNSRYYNYTLSVNGKAETHGDHPRRDYLTDVINRRATKFLDRYNPETDKPFLMVLATPACHSPFTPSPKYKNAFPNVKAPRTKNFNITSHDKHWLLRQ 250          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: UPI00065BF10D (N-acetylglucosamine-6-sulfatase isoform X1 n=2 Tax=Aplysia californica TaxID=6500 RepID=UPI00065BF10D)

HSP 1 Score: 216 bits (551), Expect = 1.370e-63
Identity = 109/237 (45.99%), Postives = 144/237 (60.76%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLAREQDYTKM 711
            VF+LTDDQD+ L   S MP+ +A + + G  F     S P+CCPSRSS++TG+Y HN LA NNS+ GNC+  +W++GPEQ  F   L   GY T + GKYLNQYG P AGG+EHIP GWD         W GL GNS+Y NY+LS  G  E HG D+ +DYL  +IH R + F+    + + PFF + STP+CH+     P++ +      APR  ++ +   D HWL  EQ  T M
Sbjct:   41 VFVLTDDQDVALFGYSPMPKAKALIGDVGKTFTNMFVSSPLCCPSRSSILTGKYVHNHLASNNSLTGNCSSPSWQKGPEQEAFPVYLKKSGYKTFFSGKYLNQYGQPGAGGVEHIPPGWDD--------WHGLVGNSRYYNYSLSVNGKEEKHGDDYKSDYLTDIIHRRALDFLNKQ-NGDSPFFLMLSTPACHEPFDSAPQFLKNFTGDKAPRTKHFNIHGTDKHWLI-EQTITPM 267          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: UPI001C908C69 (N-acetylglucosamine-6-sulfatase-like isoform X1 n=3 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C908C69)

HSP 1 Score: 211 bits (538), Expect = 2.380e-63
Identity = 108/231 (46.75%), Postives = 134/231 (58.01%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLARE 693
            VFILTDDQD VL  M  M  T+    +GG  F  A  S PVCCPSR++L+TG+YQHNT   NN++ GNC G  WR   E     A L  RGY T Y GKYLNQYG P+AGG+ H+P GWD         W GL GNS+Y NYTLS  G A  HG  +  DYL  +I    + F++   +   PFF + + P+ H    P P+YA+L P A APR  ++ +   D H L RE
Sbjct:   46 VFILTDDQDTVLQGMHPMSFTKKFFQDGGVEFKNAFVSTPVCCPSRATLLTGRYQHNTAVRNNTLAGNCCGSDWRGRSEPRTVAALLRQRGYNTFYAGKYLNQYGEPSAGGVSHVPPGWDW--------WVGLVGNSRYYNYTLSVNGTARRHGDRYEEDYLTDVITRYALEFLRGRSAGGAPFFLMVAPPAPHSPQTPAPQYARLFPGARAPRTASFNIAAEDKHRLLRE 268          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: A0A6P3VUS5_CLUHA (N-acetylglucosamine-6-sulfatase n=3 Tax=Clupeidae TaxID=55118 RepID=A0A6P3VUS5_CLUHA)

HSP 1 Score: 214 bits (546), Expect = 5.470e-63
Identity = 108/244 (44.26%), Postives = 149/244 (61.07%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADSHWLAREQDYTKMDENAAEW 732
            V ILTDD D+ +G M  + +TR  + + G +F  A  + P+CCPSR+S++TG+Y HN   +NN++ GNC+ +AW++  E F F A L    Y T + GKYLN+YG P AGG+EH+P GWD         WF L+ NSKY NYTLS  G A+ HG +++ DYL  ++ N +I F++Y  S  KPFF + STP+ H      P+Y    PN  APR PN+ V   D HWL R Q  T M  ++ E+
Sbjct:   39 VLILTDDLDVSIGGMVPLSKTRKLIGDAGIVFTNAYVASPLCCPSRASILTGKYPHNHHVINNTLEGNCSSQAWQKSQEPFTFPALLQKNYYQTFFAGKYLNEYGNPNAGGVEHVPLGWDY--------WFALERNSKYYNYTLSVNGKAQQHGQNYSQDYLTDVLANCSIDFLQYK-SNYKPFFMMVSTPAPHSPWTAAPQYESTFPNTKAPRDPNFNVHGKDKHWLIR-QAKTPMSNSSVEF 272          
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Match: A0A3R7MJF1_PENVA (Sulfatase domain-containing protein n=1 Tax=Penaeus vannamei TaxID=6689 RepID=A0A3R7MJF1_PENVA)

HSP 1 Score: 211 bits (538), Expect = 2.860e-62
Identity = 108/232 (46.55%), Postives = 139/232 (59.91%), Query Frame = 1
Query:    1 VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLVTGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKYLNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVAEAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPEPKYAQLLPNATAPRVPNYRVPNADS-HWLARE 693
            VFILTDDQD+VL  M  M   R  + + G     +  + P+CCPSRSS++TGQY HN +A+NNS+ G C+G  W+ GPE+  F   L   GY T + GKYLNQYG    GG++H+P GWD         WFGLKGNS+Y NYTLS  G+AE HG D   DYL  +I  R + F+ +  S  KPFF + S PS H    PEPKY+    +  APR  N+ +   +  HWL R+
Sbjct:   45 VFILTDDQDVVLDGMLPMANVRKLIAKEGLTLSNSFVASPLCCPSRSSILTGQYVHNHMAINNSLSGQCSGTRWQMGPEKRTFATHLHNYGYETFFAGKYLNQYGHEKVGGVKHVPPGWDW--------WFGLKGNSRYYNYTLSVNGMAEEHGTDPDKDYLTKVISERALEFL-HKSSFEKPFFMMLSVPSAHAPFTPEPKYSGNFSSLRAPRTENFNIKAGEGKHWLMRQ 267          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74979.17714.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7JEC6_BUGNE1.350e-6544.72GNS n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7... [more]
A0A2C9LAN5_BIOGL1.540e-6544.44Sulfatase domain-containing protein n=1 Tax=Biomph... [more]
F2UPU2_SALR52.800e-6446.32Sulfatase domain-containing protein n=1 Tax=Salpin... [more]
E4WS04_OIKDI8.760e-6443.67Sulfatase domain-containing protein n=2 Tax=Oikopl... [more]
UPI0014255DD69.580e-6446.52N-acetylglucosamine-6-sulfatase-like isoform X1 n=... [more]
T1JN66_STRMM1.230e-6345.26Sulfatase domain-containing protein n=1 Tax=Striga... [more]
UPI00065BF10D1.370e-6345.99N-acetylglucosamine-6-sulfatase isoform X1 n=2 Tax... [more]
UPI001C908C692.380e-6346.75N-acetylglucosamine-6-sulfatase-like isoform X1 n=... [more]
A0A6P3VUS5_CLUHA5.470e-6344.26N-acetylglucosamine-6-sulfatase n=3 Tax=Clupeidae ... [more]
A0A3R7MJF1_PENVA2.860e-6246.55Sulfatase domain-containing protein n=1 Tax=Penaeu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74979contigM-pyrifera_M_contig74979:3..734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score221.5
Seed ortholog evalue4.4e-55
Seed eggNOG ortholog946362.XP_004988875.1
Preferred nameGNS
KEGG koko:K01137
KEGG ReactionR07808,R07819
KEGG Pathwayko00531,ko01100,ko04142,map00531,map01100,map04142
KEGG ModuleM00078,M00079
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0005488,GO:0005539,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005766,GO:0005773,GO:0005775,GO:0006022,GO:0006026,GO:0006027,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0008449,GO:0008484,GO:0009056,GO:0009057,GO:0009987,GO:0012505,GO:0016192,GO:0016787,GO:0016788,GO:0030141,GO:0030203,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034774,GO:0035578,GO:0036230,GO:0042119,GO:0042339,GO:0042340,GO:0042582,GO:0043167,GO:0043168,GO:0043170,GO:0043199,GO:0043202,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0044237,GO:0044248,GO:0044273,GO:0044281,GO:0044422,GO:0044424,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046903,GO:0050896,GO:0051179,GO:0051234,GO:0060205,GO:0070013,GO:0071704,GO:0097367,GO:0097708,GO:0099503,GO:0101002,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1901681,GO:1903510,GO:1904813
EggNOG free text desc.N-acetylglucosamine-6-sulfatase activity
EggNOG OGs38E91@33154,COG3119@1,KOG3731@2759
EC3.1.6.14
COG Functional cat.G
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size732
Cds size732
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816647.650957-CDS-M-pyrifera_M_contig74979:2..7341622816647.650957-CDS-M-pyrifera_M_contig74979:2..734Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74979 3..734 -
1692278097.2592468-CDS-M-pyrifera_M_contig74979:2..7341692278097.2592468-CDS-M-pyrifera_M_contig74979:2..734Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74979 3..734 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74979.17714.1prot_M-pyrifera_M_contig74979.17714.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74979 3..734 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74979.17714.1

>prot_M-pyrifera_M_contig74979.17714.1 ID=prot_M-pyrifera_M_contig74979.17714.1|Name=mRNA_M-pyrifera_M_contig74979.17714.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
VFILTDDQDLVLGSMSVMPQTRAALVEGGTMFPVAAPSVPVCCPSRSSLV
TGQYQHNTLALNNSIPGNCAGEAWREGPEQFNFGARLAARGYLTQYIGKY
LNQYGMPAAGGLEHIPAGWDRAQGAAIGGWFGLKGNSKYLNYTLSNQGVA
EAHGADFAADYLPTLIHNRTISFIKYAVSQNKPFFAVASTPSCHQAAIPE
PKYAQLLPNATAPRVPNYRVPNADSHWLAREQDYTKMDENAAEW
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mRNA from alignment at M-pyrifera_M_contig74979:3..734-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74979.17714.1 ID=mRNA_M-pyrifera_M_contig74979.17714.1|Name=mRNA_M-pyrifera_M_contig74979.17714.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig74979:3..734- (Macrocystis pyrifera P11B4 male)
GTATTCATTCTGACGGACGACCAGGACCTGGTTCTGGGCTCGATGTCTGT GATGCCGCAGACGCGGGCTGCGTTGGTGGAGGGGGGCACGATGTTTCCGG TGGCGGCGCCTTCGGTGCCTGTGTGCTGCCCGAGCCGCAGCTCCCTGGTG ACGGGCCAGTACCAGCACAACACTCTGGCGCTGAACAACTCGATCCCGGG CAACTGCGCGGGCGAGGCCTGGCGGGAGGGGCCCGAGCAGTTCAACTTTG GGGCGCGTCTCGCTGCGCGCGGCTACCTGACGCAGTACATCGGCAAGTAC CTGAACCAGTACGGCATGCCAGCAGCGGGGGGCCTGGAGCACATCCCTGC GGGGTGGGATCGGGCGCAGGGCGCCGCCATTGGAGGCTGGTTTGGGCTCA AGGGCAACTCCAAGTACTTGAACTACACGCTGAGCAACCAGGGCGTGGCG GAAGCGCACGGCGCGGACTTTGCAGCCGACTACTTGCCGACGCTGATCCA CAACCGCACGATTTCGTTCATAAAGTACGCCGTGTCCCAAAACAAGCCCT TTTTCGCAGTCGCATCCACGCCCTCGTGCCACCAGGCCGCCATCCCAGAG CCCAAGTACGCGCAGCTGCTGCCCAACGCAACCGCGCCGCGAGTGCCTAA CTACAGGGTGCCGAATGCAGACTCCCACTGGCTGGCACGTGAACAAGACT ACACCAAGATGGACGAGAACGCGGCAGAGTGG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74979:3..734-

>mRNA_M-pyrifera_M_contig74979.17714.1 ID=mRNA_M-pyrifera_M_contig74979.17714.1|Name=mRNA_M-pyrifera_M_contig74979.17714.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig74979:3..734- (Macrocystis pyrifera P11B4 male)
GTATTCATTCTGACGGACGACCAGGACCTGGTTCTGGGCTCGATGTCTGT
GATGCCGCAGACGCGGGCTGCGTTGGTGGAGGGGGGCACGATGTTTCCGG
TGGCGGCGCCTTCGGTGCCTGTGTGCTGCCCGAGCCGCAGCTCCCTGGTG
ACGGGCCAGTACCAGCACAACACTCTGGCGCTGAACAACTCGATCCCGGG
CAACTGCGCGGGCGAGGCCTGGCGGGAGGGGCCCGAGCAGTTCAACTTTG
GGGCGCGTCTCGCTGCGCGCGGCTACCTGACGCAGTACATCGGCAAGTAC
CTGAACCAGTACGGCATGCCAGCAGCGGGGGGCCTGGAGCACATCCCTGC
GGGGTGGGATCGGGCGCAGGGCGCCGCCATTGGAGGCTGGTTTGGGCTCA
AGGGCAACTCCAAGTACTTGAACTACACGCTGAGCAACCAGGGCGTGGCG
GAAGCGCACGGCGCGGACTTTGCAGCCGACTACTTGCCGACGCTGATCCA
CAACCGCACGATTTCGTTCATAAAGTACGCCGTGTCCCAAAACAAGCCCT
TTTTCGCAGTCGCATCCACGCCCTCGTGCCACCAGGCCGCCATCCCAGAG
CCCAAGTACGCGCAGCTGCTGCCCAACGCAACCGCGCCGCGAGTGCCTAA
CTACAGGGTGCCGAATGCAGACTCCCACTGGCTGGCACGTGAACAAGACT
ACACCAAGATGGACGAGAACGCGGCAGAGTGGGTATTCATTCTGACGGAC
GACCAGGACCTGGTTCTGGGCTCGATGTCTGTGATGCCGCAGACGCGGGC
TGCGTTGGTGGAGGGGGGCACGATGTTTCCGGTGGCGGCGCCTTCGGTGC
CTGTGTGCTGCCCGAGCCGCAGCTCCCTGGTGACGGGCCAGTACCAGCAC
AACACTCTGGCGCTGAACAACTCGATCCCGGGCAACTGCGCGGGCGAGGC
CTGGCGGGAGGGGCCCGAGCAGTTCAACTTTGGGGCGCGTCTCGCTGCGC
GCGGCTACCTGACGCAGTACATCGGCAAGTACCTGAACCAGTACGGCATG
CCAGCAGCGGGGGGCCTGGAGCACATCCCTGCGGGGTGGGATCGGGCGCA
GGGCGCCGCCATTGGAGGCTGGTTTGGGCTCAAGGGCAACTCCAAGTACT
TGAACTACACGCTGAGCAACCAGGGCGTGGCGGAAGCGCACGGCGCGGAC
TTTGCAGCCGACTACTTGCCGACGCTGATCCACAACCGCACGATTTCGTT
CATAAAGTACGCCGTGTCCCAAAACAAGCCCTTTTTCGCAGTCGCATCCA
CGCCCTCGTGCCACCAGGCCGCCATCCCAGAGCCCAAGTACGCGCAGCTG
CTGCCCAACGCAACCGCGCCGCGAGTGCCTAACTACAGGGTGCCGAATGC
AGACTCCCACTGGCTGGCACGTGAACAAGACTACACCAAGATGGACGAGA
ACGCGGCAGAGTGG
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