mRNA_M-pyrifera_M_contig74929.17706.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A0R0ENC3_SOYBN (BSD domain-containing protein n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0ENC3_SOYBN) HSP 1 Score: 57.8 bits (138), Expect = 1.220e-7 Identity = 30/96 (31.25%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 1 RYTDGGIAELLGPESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAI 288 R + G + ++L P +T+ L +H + + ELLRHFW SYPIT+ +L+ K R+L++++ ++ ++E ++ + ES R + +++P+ ++L A+ Sbjct: 282 RSSQGSVLDIL-PNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNKTRRLKESISQIYSKLEDIKVSA---ESDLRHHVSLVVHPMQQALNAAL 373
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: I1NHW6_SOYBN (Uncharacterized protein n=13 Tax=Glycine subgen. Soja TaxID=1462606 RepID=I1NHW6_SOYBN) HSP 1 Score: 57.8 bits (138), Expect = 1.270e-7 Identity = 30/96 (31.25%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 1 RYTDGGIAELLGPESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAI 288 R + G + ++L P +T+ L +H + + ELLRHFW SYPIT+ +L+ K R+L++++ ++ ++E ++ + ES R + +++P+ ++L A+ Sbjct: 475 RSSQGSVLDIL-PNTTKETLLDHWVCSQELLRHFWSSYPITTQNLVNKTRRLKESISQIYSKLEDIKVSA---ESDLRHHVSLVVHPMQQALNAAL 566
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A444ZBT0_ARAHY (Uncharacterized protein n=4 Tax=Arachis TaxID=3817 RepID=A0A444ZBT0_ARAHY) HSP 1 Score: 56.6 bits (135), Expect = 3.240e-7 Identity = 30/96 (31.25%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 1 RYTDGGIAELLGPESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAI 288 +++ I ++L P ST+ +L +H + + ELLRHFW SYPIT+ +L K R+L+ A+ ++ ++E ++ + + S R + +++P+ ++L A+ Sbjct: 473 KHSQDSILDIL-PTSTKEKLLDHWVCSQELLRHFWSSYPITTQNLANKTRRLKDAISQVYSKLEEIKVSAK---SDLRHQVSLIVHPMQQALDAAL 564
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A5C7IGA5_9ROSI (BSD domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7IGA5_9ROSI) HSP 1 Score: 56.2 bits (134), Expect = 4.440e-7 Identity = 32/84 (38.10%), Postives = 51/84 (60.71%), Query Frame = 1 Query: 37 PESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAI 288 P T+ +L H ELL+HFW SYPIT+ L AKV +L+ A+ ++ ++E ++A+LR S R + L+ P+ ++L AI Sbjct: 495 PTETKEKLLQHWTCIQELLKHFWSSYPITTPYLYAKVSRLKDAMSNIYRQLEEMKASLR---SDLRHQVSLLVRPMQQALDAAI 575
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A2R6QT45_ACTCC (RNA polymerase II transcription factor B subunit 1-1 like n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QT45_ACTCC) HSP 1 Score: 56.2 bits (134), Expect = 4.440e-7 Identity = 30/85 (35.29%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 37 PESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAIA 291 P T+ L +H ELL+HFW SYPIT++ L KVRKL A+ ++ +++ ++ ++ +S R + L+ P+L++L+ A A Sbjct: 499 PSITKEELLHHWTSIQELLKHFWSSYPITTSYLYVKVRKLRDAMSQIYSKLQEIKESV---QSDFRHQVSLLVQPMLQALEAAFA 580
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: C5YGW1_SORBI (Uncharacterized protein n=8 Tax=Andropogoneae TaxID=147429 RepID=C5YGW1_SORBI) HSP 1 Score: 55.5 bits (132), Expect = 8.290e-7 Identity = 31/88 (35.23%), Postives = 55/88 (62.50%), Query Frame = 1 Query: 28 LLG--PESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQA 285 LLG P+ T+ L +H ELLRHFW SYPITSA L KV+++++A+ ++ +++L++ + + R ++L+ P+ ++L A Sbjct: 495 LLGQLPQHTRDELMDHWTAIQELLRHFWSSYPITSAVLYNKVQRVKEAMTQIYQKLQLIKESA---QPDVRHEISRLVKPMTQALDAA 579
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A834GZ54_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GZ54_RHOSS) HSP 1 Score: 55.5 bits (132), Expect = 8.290e-7 Identity = 29/85 (34.12%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 37 PESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAIA 291 P+ T+ L +H ELL+HFW SYPIT++ L KVR+L+ A+ ++ +++ ++ ++ +S R + L+ P+L++L A A Sbjct: 501 PKITKEELLHHWTSIEELLKHFWSSYPITTSYLYVKVRRLKDAMSQIYPKLQEIKESV---QSDCRHQVSLLVQPMLQALDAAFA 582
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A3S3P278_9MAGN (Putative RNA polymerase II transcription factor B subunit 1-1 isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3P278_9MAGN) HSP 1 Score: 55.5 bits (132), Expect = 8.290e-7 Identity = 29/85 (34.12%), Postives = 52/85 (61.18%), Query Frame = 1 Query: 37 PESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAIA 291 P T+ L +H ELLRHFW SYP+T++ L KV +L+ AL ++ +++ ++ ++ +S +R + L+ P+L++L A A Sbjct: 502 PNRTKEELLHHWTSIQELLRHFWSSYPVTTSYLYTKVGRLKDALTQIYPKLQEIKESM---QSDSRHQVSLLVQPMLQALDAAFA 583
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A5B8MTW4_9CHLO (Subunit 1 of transcription initiation factor TFIIH n=3 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MTW4_9CHLO) HSP 1 Score: 55.5 bits (132), Expect = 8.300e-7 Identity = 28/82 (34.15%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 34 GPESTQLRLHNHLLKA----NELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLL 267 GPE + + + +A NELLRHFW S+P++S + KV+++ QAL+ ++++E +++NL +SG + A L+ +L Sbjct: 514 GPEGSDQEVFQQVRRASIAVNELLRHFWASFPLSSEHRIEKVKRINQALVAQYEKIEKMRSNL---DSGTTQFARPLIGQVL 592
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Match: A0A1J7IE40_LUPAN (Uncharacterized protein n=5 Tax=Lupinus TaxID=3869 RepID=A0A1J7IE40_LUPAN) HSP 1 Score: 55.1 bits (131), Expect = 1.130e-6 Identity = 26/84 (30.95%), Postives = 55/84 (65.48%), Query Frame = 1 Query: 37 PESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRKLEQALLTMFDEVELLQANLRRQESGAREGAAQLLNPLLRSLQQAI 288 P +T+ +L +H + + ELLRHFW SYPIT+ +L +K ++L+ A+ ++ ++E ++ + +S R + +++P+ ++L A+ Sbjct: 485 PNTTKEKLLDHWVSSQELLRHFWSSYPITTQNLASKTKRLKDAMSQVYSKLEEIKVSA---QSDLRHQISLVVHPMQQALDAAV 565 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74929.17706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig74929.17706.1 >prot_M-pyrifera_M_contig74929.17706.1 ID=prot_M-pyrifera_M_contig74929.17706.1|Name=mRNA_M-pyrifera_M_contig74929.17706.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp RYTDGGIAELLGPESTQLRLHNHLLKANELLRHFWRSYPITSASLLAKVRback to top mRNA from alignment at M-pyrifera_M_contig74929:553..843+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig74929.17706.1 ID=mRNA_M-pyrifera_M_contig74929.17706.1|Name=mRNA_M-pyrifera_M_contig74929.17706.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig74929:553..843+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig74929:553..843+ >mRNA_M-pyrifera_M_contig74929.17706.1 ID=mRNA_M-pyrifera_M_contig74929.17706.1|Name=mRNA_M-pyrifera_M_contig74929.17706.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig74929:553..843+ (Macrocystis pyrifera P11B4 male)back to top |