mRNA_M-pyrifera_M_contig74856.17698.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74856.17698.1
Unique NamemRNA_M-pyrifera_M_contig74856.17698.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A7K1ZA09_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZA09_9ACTN)

HSP 1 Score: 425 bits (1093), Expect = 1.100e-145
Identity = 220/321 (68.54%), Postives = 271/321 (84.42%), Query Frame = 1
Query:    7 GGVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVYHRVLV 969
            G VAL +GAF L+NR+RGR    LPD VG  E+ L+ LLPA+PTA+G++ A+ +++L VL  N+++L++  V+T+WG++PM+RWS+GQ+ AQI D+ANL +KSLPILLIFSAFIFLNAEMWQVANDFTLP+FA V  +++ IGS FVM+SVR  TVDLARF RWS+V+  SV TPV+ +VP D+ PAP+AP L RRAE+NVALLLF SQAIQILLVALVIT FY++FGL TVR ETLLQWTTATELT+  DWA RWS++G ELIF+RQLVLVSAFIG+MSGLQFAVQ+VTD +YR EFAE MT+E+REALAVRAVY+R LV
Sbjct:   80 GCVALGVGAFALINRIRGRRLVQLPDRVGTLEIVLYLLLPAVPTAVGSQTAVTENVLVVLVFNVLVLLVAFVVTSWGLLPMIRWSIGQLKAQIGDIANLTMKSLPILLIFSAFIFLNAEMWQVANDFTLPYFAAVVALIVFIGSGFVMLSVRRLTVDLARFERWSDVRERSVDTPVEQMVPDDEAPAPDAPRLHRRAEYNVALLLFASQAIQILLVALVITVFYVLFGLLTVREETLLQWTTATELTSSVDWASRWSIWGGELIFSRQLVLVSAFIGLMSGLQFAVQIVTDTAYRDEFAEDMTSEIREALAVRAVYYRRLV 400          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A2D8LUA8_9ACTN (Uncharacterized protein n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LUA8_9ACTN)

HSP 1 Score: 409 bits (1050), Expect = 2.540e-139
Identity = 207/324 (63.89%), Postives = 259/324 (79.94%), Query Frame = 1
Query:    4 LGGVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVYHRVLVGS 975
            LGG+A ++G  VLVNR+RGR ++ LPD +G+ E+AL+ +LP +PT IG++ +  D+ + V+  NLV+L +G V+T+W +IPM+RWS GQV  Q+ DVANLA+KSLP LLIFSAFIF+NAEMWQVANDFTLP F  V  +++GIG  F+ VSVR  TVDLARFS W +V+P    TPV++I+P DD+PAP+ P L RRAEWNV LLLFV+Q IQ+LLV+LVIT FY+VFGL TVR ETLLQWTT  ELT E+DWAV  ++FG +LIFTRQL+LV+ FIGM SGL FAVQV+TDD+YR EF   MTAEVR+ALAVRAVYHR LV +
Sbjct:   70 LGGIAALVGGVVLVNRIRGRRSFQLPDDIGVWELALYVVLPIVPTVIGSQGSAVDNAVSVVAFNLVLLAVGYVVTSWALIPMMRWSFGQVRRQVTDVANLAMKSLPTLLIFSAFIFINAEMWQVANDFTLPLFGMVMLLLVGIGGIFIFVSVRRLTVDLARFSAWGDVRPRCANTPVEEIIPADDEPAPDTPPLVRRAEWNVNLLLFVAQGIQVLLVSLVITTFYVVFGLLTVREETLLQWTTVGELTYERDWAVDIAIFGTDLIFTRQLLLVALFIGMFSGLNFAVQVITDDTYREEFIADMTAEVRDALAVRAVYHRRLVAT 393          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A6B1B4G8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1B4G8_9ACTN)

HSP 1 Score: 362 bits (928), Expect = 1.010e-120
Identity = 184/320 (57.50%), Postives = 240/320 (75.00%), Query Frame = 1
Query:   10 GVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVYHRVLV 969
            G+A+M G   LVN LRGR  W LPD  G+ EV  + +L A+   +G+ D+I  D  +  G N  +LV   V+T+WG++PM+RWS+GQ+W Q+  V  L  KSLPILL+FSAFIFLNAEMWQVANDFTLPFF  +  +++ +G+ FV++SVR   VD+ARFS W++V+     TP+  +VP DD PAP++P LGRRA +NV+LLLFV+Q+IQI LVA+++T FY++FG+FTVR  TLLQWTT ++LT E  W V   ++  EL+F+RQLVLV+AFIG+ SGLQFAV VV D SYR+EFAE MT E+REALAVRAVYHR LV
Sbjct:   78 GLAVMAGVVALVNLLRGRRLWQLPDRFGVWEVLAYLVLGAVFAGLGSSDSIIVDAAFAAGLNAALLVGAYVVTSWGLLPMVRWSVGQLWRQVGQVMTLLAKSLPILLVFSAFIFLNAEMWQVANDFTLPFFGMIAALLVAVGALFVIISVRRLAVDMARFSSWADVRSRCAETPIASLVPADDSPAPDSPPLGRRARFNVSLLLFVAQSIQIALVAVIVTCFYVLFGVFTVRESTLLQWTTLSQLTWEGSWVVSLPLWSGELLFSRQLVLVAAFIGLFSGLQFAVSVVLDSSYRSEFAEDMTDELREALAVRAVYHRTLV 397          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A6B1EIX6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EIX6_9ACTN)

HSP 1 Score: 351 bits (901), Expect = 1.230e-116
Identity = 182/322 (56.52%), Postives = 243/322 (75.47%), Query Frame = 1
Query:   10 GVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVYHRVLVGS 975
            G+A+      LVNRLRGR  W LPD VGL E+  +  LPA+   +GA  ++ +D  + +  N+++L +  ++T+WG++PM+RWSLGQ+  Q+  +  L  KSLPILL+FSAFIFLNAEMWQVA+DFTLP+F  V  +++ +G+ FV +SVR   VDLARFS WS+V+   V TPV+ +VP D    P++P L R A +NV+LLLFV+Q+IQI+LVAL++TAFY++FG+FTVR ETLL WTT ++LT E+ WAVR  ++G +L+FTR LVLV+ FIG+ SGLQFAV VV D  YR+EFAE MTAE+REALAVRAVYHRVLV +
Sbjct:   78 GLAVTAAVMALVNRLRGRRLWQLPDRVGLWEILAYLGLPAVFAGLGATGSVVEDAGFFVVVNILVLGVAYLVTSWGLVPMVRWSLGQLGRQVGRMMTLLAKSLPILLVFSAFIFLNAEMWQVAHDFTLPYFGMVAALLVAVGTLFVTISVRRLAVDLARFSAWSDVRSRCVATPVEPLVPDDAAVPPDSPPLSRGARFNVSLLLFVAQSIQIMLVALIVTAFYVLFGVFTVREETLLDWTTLSQLTWEESWAVRIPLWGEDLLFTRPLVLVATFIGLFSGLQFAVSVVLDAGYRSEFAEEMTAELREALAVRAVYHRVLVDA 399          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A7X5WRK3_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X5WRK3_9ACTN)

HSP 1 Score: 229 bits (585), Expect = 2.070e-71
Identity = 118/182 (64.84%), Postives = 147/182 (80.77%), Query Frame = 1
Query:    4 LGGVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVP 549
            L GV +++ AFV VNRLRGR +  LPD VG+ EVALF LLPAIPTAIGAE ++   +  V+G NLV+LVL  V+TAWG++PM+RWS+GQ+  QI D+ANLA+KSLPILL+FSAFIFLNAEMWQVANDFTLPFF  V  +V+ +G+AFVM+SV+  TVDLARF  W++V+P   GTPV D+VP
Sbjct:   39 LAGVVVLVAAFVAVNRLRGRRSLQLPDRVGVLEVALFVLLPAIPTAIGAEGSVAAPVGAVVGVNLVLLVLAFVVTAWGLLPMMRWSIGQLRVQIGDIANLAMKSLPILLLFSAFIFLNAEMWQVANDFTLPFFGAVAAVVVLVGTAFVMLSVKRLTVDLARFGAWADVRPRCEGTPVADLVP 220          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A6J7A7N5_9ZZZZ (Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A6J7A7N5_9ZZZZ)

HSP 1 Score: 235 bits (599), Expect = 2.660e-71
Identity = 136/317 (42.90%), Postives = 201/317 (63.41%), Query Frame = 1
Query:    7 GGVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPA-IPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVY 954
            G +A+++ A    N  RGR A   P  VG  E+  F ++PA +  A G+  A     L V   N+ +L+L   +T++G++PM  W+ GQ+ +Q+  +ANL +K+LP+LL+FS F+FLNAE+WQVANDF  P F  V   ++ IGS F+ ++ +   V L+ F  WS+V  +  G+P++ + P      P +  L  RA +N+AL++FV+Q+IQ+LL+A V  AFY+ FGL TVR +T+ QW +   L A +D     +VFG EL+ +RQL++VS FI   + LQF VQ+VTD +YR +FA GM AE R+ LAVRA Y
Sbjct:   67 GVLAIVMLAIAATNSARGRRALQAPKRVGPVEIGAFVIVPAAVAAAFGSNRAAAVPALLV--GNVALLLLAYPITSYGVLPMTSWAAGQLSSQLRGMANLMIKTLPLLLLFSMFLFLNAEVWQVANDFAWPMFIAVLLGLVLIGSLFLALATQTNVVALSTFDSWSDVCAYCEGSPLEGVSPDLFSGEPASRQLPTRARFNLALVVFVNQSIQVLLIAAVTFAFYVTFGLLTVREDTIAQWVSDGALPA-RDRYGDLTVFGHELVLSRQLLVVSGFITGFAALQFVVQLVTDATYREQFARGMAAETRQVLAVRAAY 380          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A7Y2GKR8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKR8_9ACTN)

HSP 1 Score: 230 bits (587), Expect = 1.620e-69
Identity = 137/312 (43.91%), Postives = 190/312 (60.90%), Query Frame = 1
Query:   10 GVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVR 945
            GV  ++G+ VL+NR+RGR    +PD VG+PE+ALF L+P I  A+    A   DL+     NL IL +G ++T++G+ PM+ W+  QV  Q+ D++ L  KSLP+LL+FSAF+F+NAE+WQVA+     FF  V   + GI   F+ + + N    +  F  W+EV     G PV  +      P P+   L RR   N+ LLL V+Q IQ+ LVA ++  FY+VFGL TV   TLLQWTT T   AE D  + + +F   ++FTR L++VS FI   SGLQFAV VV D +YR EF   +  E+R+ LAVR
Sbjct:   67 GVVAIIGSVVLLNRMRGRRWNQIPDDVGIPELALFVLVPPILRAVSTGSA--QDLVQWAAINLGILGIGYLVTSYGLFPMIPWAFRQVRRQLGDISRLFAKSLPLLLLFSAFLFVNAEIWQVASAIPTIFFVLVLAFLFGITVLFLSLGLMNALDGMTGFDSWAEVDALCHGAPVPGVGIRPGRPVPHP--LRRRERLNLGLLLMVAQLIQVALVASMVAVFYVVFGLLTVGESTLLQWTTVTA--AEFDPLIEFELFDHTVVFTRSLMIVSGFISAFSGLQFAVSVVNDKTYREEFTGELRQELRQLLAVR 372          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A7V9IRK6_9ACTN (Uncharacterized protein n=1 Tax=Geodermatophilaceae bacterium TaxID=1882271 RepID=A0A7V9IRK6_9ACTN)

HSP 1 Score: 221 bits (564), Expect = 9.430e-66
Identity = 137/322 (42.55%), Postives = 196/322 (60.87%), Query Frame = 1
Query:    4 LGGVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAI-PTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDD----DPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVY 954
            LG VA+ L    +VNR+RGR +  +PD  G  E+A F ++P I P  IG + A    L   L  N+ ILVL   +T++ ++PM  WSL  + AQ+ +VA +  +++P LL+FS F+FLNAEMW+V+ +   PFF  V  + + +GS F+++ + +  V LARF+ W+EV+    GTP    VPTDD    +PAP    L R   +NVAL+LFVSQ +Q LLV+L++T FY++ GL TV A T  QW     +      A     FG ++  TR+L++ +AFIG + GLQF V  +TD +YRAEF   +  E+RE  AVR VY
Sbjct:   65 LGAVAIALTGVAVVNRMRGRRSLQIPDRFGGLEIAAFLVVPPIIPLVIGGQVAQAVTL---LAVNVAILVLVYFVTSYAVLPMALWSLRVIAAQMRNVAVVVGRTMPTLLLFSIFMFLNAEMWKVSAEIPTPFFLGVVALFVALGSGFLVLRLPHDIVALARFASWAEVRADCAGTPALAAVPTDDVQLTEPAP----LRRTERFNVALMLFVSQGLQALLVSLIVTGFYVLLGLLTVGAPTFAQWVGRDAVPLGPTLAA----FGGDIFVTRELLVTAAFIGTVGGLQFLVTALTDSTYRAEFFGVVERELREIFAVRKVY 375          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A7K2B162_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2B162_9ACTN)

HSP 1 Score: 216 bits (550), Expect = 8.620e-64
Identity = 137/336 (40.77%), Postives = 195/336 (58.04%), Query Frame = 1
Query:    7 GGVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEV--------QPFSVGTPVDDIVPTDDDPA-------PNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVYHRVLV 969
            G   +++   VL NRLRGR A+ +PD VG  E+ +FF LP+   A+   D+     L VL  N+V + +  ++T++GI+PMLRW++  +  Q+  +  L  +SLP+LL+FS  IFLNAEMWQ+A+DF   ++  V  +VL +   F+ + +      LA FS W E+         P +    +    P    PA       P    L R A  NVALLLFVS  +++LLV+LV+  F+++ GLFTVRA+T+LQWTT TEL    D    W +FG E++ T +L+  +  I  +S LQFAV  + D SYR +F   + AEVR  LAVRAVY R LV
Sbjct:   69 GSAGILVAGAVLANRLRGRRAFQVPDRVGFIELGVFFALPSAIVALFG-DSPAQYALAVLVLNVVAVSVIYLITSYGIVPMLRWAVVFMARQMRQIVQLLARSLPLLLLFSLVIFLNAEMWQLAHDFLPAYYGIVVGMVLALSLVFLAIRIPLEVRSLAGFSSWQEIVDCCRASDAPPATHAELLAAAPESGAPAAGTGDVVPLTAPLDRSARANVALLLFVSAMVRMLLVSLVVGVFFVILGLFTVRADTILQWTTQTEL----DPIATWQLFGGEMVLTWELLASAGVIATISALQFAVASLNDTSYREQFFNDVAAEVRTVLAVRAVYSRHLV 399          
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Match: A0A520XUP9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XUP9_9ACTN)

HSP 1 Score: 215 bits (548), Expect = 1.310e-63
Identity = 124/318 (38.99%), Postives = 190/318 (59.75%), Query Frame = 1
Query:   10 GVALMLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDDLLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLPILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTTVDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLLFVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVRWSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAEVREALAVRAVYHRV 963
            G+ ++L A  L+NR RGR  +  P+ +   E+ LF  +P +   IG  +      + V+G N+ +LV   ++ AWG++ M RW L  +W  +  +  L  + LP++L+FSAF+FLNAE+WQV N FT   F  V F ++ IG +F+  ++R    +L  F  W EV      TP++   P   +  P A  L R+A+ N+ L L V  A Q+LLV L+I  FY++FG+ TVRA+T+LQWTT   L  + +    +S  G E++ T+  ++ + F+   SGLQFAV +VTD +++ +F +G  AEVREA+AVRAVY R+
Sbjct:   75 GLGVVLTAVALLNRFRGRSPFARPNDIEAGELGLFVFVPPVLALIGGHNDFWG-FVGVIGLNVALLVGTYIVVAWGLLSMTRWGLILMWTYLSQIVQLLGRILPLMLLFSAFLFLNAEVWQVVNGFTTTLFLGVLFGLVLIGLSFLTGAMRGAIGELQWFDSWEEVNRELDDTPLEGFDPCGFEGRPQAVPLSRKAKVNLTLRLVVGLAAQVLLVTLLIFGFYVLFGVITVRADTVLQWTTLDSL--DDEMLASFSFRGDEIVLTKLHLVAAGFVASFSGLQFAVSLVTDSAFKRDFVDGSNAEVREAIAVRAVYLRL 389          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74856.17698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1ZA09_9ACTN1.100e-14568.54Uncharacterized protein n=2 Tax=Acidimicrobiaceae ... [more]
A0A2D8LUA8_9ACTN2.540e-13963.89Uncharacterized protein n=8 Tax=Acidimicrobiaceae ... [more]
A0A6B1B4G8_9ACTN1.010e-12057.50Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A6B1EIX6_9ACTN1.230e-11656.52Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A7X5WRK3_9ACTN2.070e-7164.84Uncharacterized protein (Fragment) n=1 Tax=Actinom... [more]
A0A6J7A7N5_9ZZZZ2.660e-7142.90Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A... [more]
A0A7Y2GKR8_9ACTN1.620e-6943.91Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]
A0A7V9IRK6_9ACTN9.430e-6642.55Uncharacterized protein n=1 Tax=Geodermatophilacea... [more]
A0A7K2B162_9ACTN8.620e-6440.77Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A520XUP9_9ACTN1.310e-6338.99Uncharacterized protein n=1 Tax=Acidimicrobiales b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74856contigM-pyrifera_M_contig74856:3..980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score170.2
Seed ortholog evalue1.5e-39
Seed eggNOG ortholog1313172.YM304_12690
Hectar predicted targeting categorysignal peptide
EggNOG OGs28ND6@1,2H5QC@201174,2ZBG0@2
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size978
Cds size957
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816646.9673562-UTR-M-pyrifera_M_contig74856:2..231622816646.9673562-UTR-M-pyrifera_M_contig74856:2..23Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74856 3..23 +
1692278096.9417822-UTR-M-pyrifera_M_contig74856:2..231692278096.9417822-UTR-M-pyrifera_M_contig74856:2..23Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74856 3..23 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816646.980093-CDS-M-pyrifera_M_contig74856:23..9801622816646.980093-CDS-M-pyrifera_M_contig74856:23..980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74856 24..980 +
1692278096.9545224-CDS-M-pyrifera_M_contig74856:23..9801692278096.9545224-CDS-M-pyrifera_M_contig74856:23..980Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74856 24..980 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74856.17698.1prot_M-pyrifera_M_contig74856.17698.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74856 24..980 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74856.17698.1

>prot_M-pyrifera_M_contig74856.17698.1 ID=prot_M-pyrifera_M_contig74856.17698.1|Name=mRNA_M-pyrifera_M_contig74856.17698.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=319bp
MLGAFVLVNRLRGRPAWMLPDTVGLPEVALFFLLPAIPTAIGAEDAIGDD
LLWVLGANLVILVLGAVLTAWGIIPMLRWSLGQVWAQIHDVANLALKSLP
ILLIFSAFIFLNAEMWQVANDFTLPFFACVFFIVLGIGSAFVMVSVRNTT
VDLARFSRWSEVQPFSVGTPVDDIVPTDDDPAPNAPSLGRRAEWNVALLL
FVSQAIQILLVALVITAFYLVFGLFTVRAETLLQWTTATELTAEKDWAVR
WSVFGAELIFTRQLVLVSAFIGMMSGLQFAVQVVTDDSYRAEFAEGMTAE
VREALAVRAVYHRVLVGS*
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mRNA from alignment at M-pyrifera_M_contig74856:3..980+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74856.17698.1 ID=mRNA_M-pyrifera_M_contig74856.17698.1|Name=mRNA_M-pyrifera_M_contig74856.17698.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=978bp|location=Sequence derived from alignment at M-pyrifera_M_contig74856:3..980+ (Macrocystis pyrifera P11B4 male)
CTGCTCGGCGGTGTCGCACTCATGCTGGGCGCGTTCGTGCTCGTCAACCG GCTGCGGGGTCGTCCCGCATGGATGCTGCCCGACACCGTCGGCCTGCCCG AGGTGGCGCTCTTCTTCCTGCTGCCGGCCATCCCGACGGCGATCGGGGCC GAGGACGCGATCGGCGACGATCTCCTCTGGGTGCTCGGCGCCAACCTCGT CATTCTGGTTCTGGGGGCCGTGCTCACGGCGTGGGGGATCATCCCGATGC TGCGATGGTCGCTCGGGCAGGTCTGGGCCCAGATCCACGACGTCGCCAAC CTCGCCCTGAAGTCCCTGCCCATCCTGTTGATCTTCTCGGCCTTCATCTT CCTCAACGCCGAGATGTGGCAGGTCGCCAACGACTTCACGCTCCCGTTCT TCGCCTGCGTCTTCTTCATCGTGCTCGGCATCGGCAGCGCCTTCGTGATG GTGTCGGTGCGCAACACGACCGTCGACCTCGCCCGGTTCTCCCGGTGGTC CGAGGTGCAGCCGTTCAGTGTCGGCACTCCGGTCGACGACATCGTGCCGA CCGACGACGATCCGGCACCGAATGCGCCGAGTCTCGGCCGGAGAGCCGAG TGGAACGTCGCCCTGTTGCTCTTCGTCTCGCAAGCGATTCAGATCCTGCT GGTCGCGCTCGTGATCACCGCGTTCTATCTCGTCTTCGGCTTGTTCACGG TGCGGGCCGAGACACTCCTGCAGTGGACGACCGCCACCGAGCTCACCGCC GAGAAGGACTGGGCCGTTCGCTGGTCGGTCTTCGGCGCGGAGCTGATCTT CACGCGTCAGCTCGTGCTGGTGTCGGCCTTCATCGGCATGATGTCGGGAC TCCAGTTCGCGGTGCAGGTCGTCACCGACGATTCCTATCGAGCCGAGTTC GCCGAAGGCATGACCGCCGAAGTGCGTGAAGCACTCGCCGTGCGCGCGGT GTATCACCGGGTGCTGGTCGGGAGCTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74856:3..980+

>mRNA_M-pyrifera_M_contig74856.17698.1 ID=mRNA_M-pyrifera_M_contig74856.17698.1|Name=mRNA_M-pyrifera_M_contig74856.17698.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1914bp|location=Sequence derived from alignment at M-pyrifera_M_contig74856:3..980+ (Macrocystis pyrifera P11B4 male)
ATGCTGGGCGCGTTCGTGCTCGTCAACCGGCTGCGGGGTCGTCCCGCATG
GATGCTGCCCGACACCGTCGGCCTGCCCGAGGTGGCGCTCTTCTTCCTGC
TGCCGGCCATCCCGACGGCGATCGGGGCCGAGGACGCGATCGGCGACGAT
CTCCTCTGGGTGCTCGGCGCCAACCTCGTCATTCTGGTTCTGGGGGCCGT
GCTCACGGCGTGGGGGATCATCCCGATGCTGCGATGGTCGCTCGGGCAGG
TCTGGGCCCAGATCCACGACGTCGCCAACCTCGCCCTGAAGTCCCTGCCC
ATCCTGTTGATCTTCTCGGCCTTCATCTTCCTCAACGCCGAGATGTGGCA
GGTCGCCAACGACTTCACGCTCCCGTTCTTCGCCTGCGTCTTCTTCATCG
TGCTCGGCATCGGCAGCGCCTTCGTGATGGTGTCGGTGCGCAACACGACC
GTCGACCTCGCCCGGTTCTCCCGGTGGTCCGAGGTGCAGCCGTTCAGTGT
CGGCACTCCGGTCGACGACATCGTGCCGACCGACGACGATCCGGCACCGA
ATGCGCCGAGTCTCGGCCGGAGAGCCGAGTGGAACGTCGCCCTGTTGCTC
TTCGTCTCGCAAGCGATTCAGATCCTGCTGGTCGCGCTCGTGATCACCGC
GTTCTATCTCGTCTTCGGCTTGTTCACGGTGCGGGCCGAGACACTCCTGC
AGTGGACGACCGCCACCGAGCTCACCGCCGAGAAGGACTGGGCCGTTCGC
TGGTCGGTCTTCGGCGCGGAGCTGATCTTCACGCGTCAGCTCGTGCTGGT
GTCGGCCTTCATCGGCATGATGTCGGGACTCCAGTTCGCGGTGCAGGTCG
TCACCGACGATTCCTATCGAGCCGAGTTCGCCGAAGGCATGACCGCCGAA
GTGCGTGAAGCACTCGCCGTGCGCGCGGTGTATCACCGGGTGCTGGTCGG
GAGCTAGATGCTGGGCGCGTTCGTGCTCGTCAACCGGCTGCGGGGTCGTC
CCGCATGGATGCTGCCCGACACCGTCGGCCTGCCCGAGGTGGCGCTCTTC
TTCCTGCTGCCGGCCATCCCGACGGCGATCGGGGCCGAGGACGCGATCGG
CGACGATCTCCTCTGGGTGCTCGGCGCCAACCTCGTCATTCTGGTTCTGG
GGGCCGTGCTCACGGCGTGGGGGATCATCCCGATGCTGCGATGGTCGCTC
GGGCAGGTCTGGGCCCAGATCCACGACGTCGCCAACCTCGCCCTGAAGTC
CCTGCCCATCCTGTTGATCTTCTCGGCCTTCATCTTCCTCAACGCCGAGA
TGTGGCAGGTCGCCAACGACTTCACGCTCCCGTTCTTCGCCTGCGTCTTC
TTCATCGTGCTCGGCATCGGCAGCGCCTTCGTGATGGTGTCGGTGCGCAA
CACGACCGTCGACCTCGCCCGGTTCTCCCGGTGGTCCGAGGTGCAGCCGT
TCAGTGTCGGCACTCCGGTCGACGACATCGTGCCGACCGACGACGATCCG
GCACCGAATGCGCCGAGTCTCGGCCGGAGAGCCGAGTGGAACGTCGCCCT
GTTGCTCTTCGTCTCGCAAGCGATTCAGATCCTGCTGGTCGCGCTCGTGA
TCACCGCGTTCTATCTCGTCTTCGGCTTGTTCACGGTGCGGGCCGAGACA
CTCCTGCAGTGGACGACCGCCACCGAGCTCACCGCCGAGAAGGACTGGGC
CGTTCGCTGGTCGGTCTTCGGCGCGGAGCTGATCTTCACGCGTCAGCTCG
TGCTGGTGTCGGCCTTCATCGGCATGATGTCGGGACTCCAGTTCGCGGTG
CAGGTCGTCACCGACGATTCCTATCGAGCCGAGTTCGCCGAAGGCATGAC
CGCCGAAGTGCGTGAAGCACTCGCCGTGCGCGCGGTGTATCACCGGGTGC
TGGTCGGGAGCTAG
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