mRNA_M-pyrifera_M_contig74850.17695.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74850.17695.1
Unique NamemRNA_M-pyrifera_M_contig74850.17695.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A1L8DZI0_9DIPT (CTP_transf_like domain-containing protein n=2 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DZI0_9DIPT)

HSP 1 Score: 85.9 bits (211), Expect = 7.640e-18
Identity = 39/78 (50.00%), Postives = 58/78 (74.36%), Query Frame = 1
Query:    1 HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDKKK 234
            +LI  +   ASGKS M +  ++ G  V+DCD++ H+LYEPG++ FRA+   FG+G+VG DG+IDR+ LG++VFS K+K
Sbjct:  305 YLIGLVGGIASGKSIMCERFKRFGAAVIDCDKLAHSLYEPGTECFRALEAHFGSGIVGADGRIDRKVLGSIVFSHKEK 382          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A1B0CL29_LUTLO (S-(hydroxymethyl)glutathione dehydrogenase n=2 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A1B0CL29_LUTLO)

HSP 1 Score: 85.9 bits (211), Expect = 8.170e-18
Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 1
Query:    1 HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDKKK 234
            +LI  L   ASGKS M +  ++ G  V+DCD++ H+LYEPG++ F A+   FG G+VG DGKIDR+ LG++VFS K+K
Sbjct:  309 YLIGLLGGIASGKSIMCERFKRFGAAVIDCDKLAHSLYEPGTECFNALKEHFGAGIVGSDGKIDRKVLGSIVFSQKEK 386          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A535AAC1_9DELT (Dephospho-CoA kinase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A535AAC1_9DELT)

HSP 1 Score: 82.0 bits (201), Expect = 1.310e-17
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 1
Query:   31 SGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSD 225
            +GKST+A  L + G  V+D D++GH +Y PGS+GF  VV  FG GVVG DG IDRRALGALVF+D
Sbjct:   14 AGKSTVAAFLTELGARVIDADRIGHEVYRPGSEGFARVVEAFGPGVVGADGAIDRRALGALVFAD 78          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A7G3AT34_LUTLO (CTP_transf_like domain-containing protein n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A7G3AT34_LUTLO)

HSP 1 Score: 85.1 bits (209), Expect = 1.440e-17
Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = 1
Query:    1 HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDKKK 234
            +LI  L   ASGKS M +  ++ G  V+DCD++ H LYEPG++ F A+   FG G+VG DGKIDR+ LG++VFS K+K
Sbjct:  309 YLIGLLGGIASGKSIMCERFKRFGAAVIDCDKLAHLLYEPGTECFNALKEHFGAGIVGSDGKIDRKVLGSIVFSQKEK 386          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A1B0DBI0_PHLPP (Bifunctional phosphopantetheine adenyltransferase n=1 Tax=Phlebotomus papatasi TaxID=29031 RepID=A0A1B0DBI0_PHLPP)

HSP 1 Score: 84.7 bits (208), Expect = 1.960e-17
Identity = 40/78 (51.28%), Postives = 55/78 (70.51%), Query Frame = 1
Query:    1 HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDKKK 234
            +LI  +   ASGKS M + L++ G  V+DCD++ H+LYEPG+D F A+   FG G+VG DGKIDR+ LG++VF  K K
Sbjct:  307 YLIGLVGGIASGKSIMCERLKRFGATVIDCDKLAHSLYEPGTDCFNALKSHFGIGIVGGDGKIDRKVLGSIVFKHKDK 384          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A2E0Y505_9GAMM (Dephospho-CoA kinase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E0Y505_9GAMM)

HSP 1 Score: 81.6 bits (200), Expect = 2.160e-17
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 1
Query:   28 ASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSD 225
            ASGKST A+ L + G  V+D D++GH +YEPG+ GFRAVV  FG  +VG+DG IDRRALG  VF D
Sbjct:   10 ASGKSTAARYLEQLGASVIDADKLGHRVYEPGTAGFRAVVHAFGDDIVGDDGLIDRRALGGKVFGD 75          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A6B2EIL2_9DIPT (CTP_transf_like domain-containing protein (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EIL2_9DIPT)

HSP 1 Score: 84.3 bits (207), Expect = 2.680e-17
Identity = 37/78 (47.44%), Postives = 59/78 (75.64%), Query Frame = 1
Query:    1 HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDKKK 234
            +L+  +   ASGKS M + L++ G  V+DCD++ H++YEPG+D F A+   FG G+VGEDG+I+R+ LG++VF++K+K
Sbjct:  306 YLVGLVGGIASGKSIMCERLKRFGAAVIDCDKLAHSIYEPGTDCFSALKSHFGIGIVGEDGRINRKILGSIVFNNKEK 383          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: UPI0014256ABC (bifunctional coenzyme A synthase-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014256ABC)

HSP 1 Score: 79.3 bits (194), Expect = 2.910e-17
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 1
Query:    1 HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSD 225
            +LI     +ASGKS++ K L K G  +V CD++GH  YEPG++ F+ VV +FG  +VGEDG I+R+ LGA VFSD
Sbjct:   21 YLIGLTGGSASGKSSICKRLHKIGAGIVKCDELGHKAYEPGTETFKEVVKQFGEAIVGEDGFINRKMLGAKVFSD 95          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A8B8A041_ACAPL (bifunctional coenzyme A synthase-like isoform X3 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A041_ACAPL)

HSP 1 Score: 83.2 bits (204), Expect = 3.990e-17
Identity = 40/67 (59.70%), Postives = 47/67 (70.15%), Query Frame = 1
Query:   28 ASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDK 228
            ASGKS + K L   G  V+DCD++GH  Y PG+ GFR VV EFG  VVG DG I+RRALGA VF D+
Sbjct:  155 ASGKSAVCKRLEGQGAAVIDCDKLGHKAYLPGTQGFRRVVAEFGQDVVGSDGSINRRALGAKVFQDR 221          
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Match: A0A8B8A036_ACAPL (bifunctional coenzyme A synthase-like isoform X1 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A036_ACAPL)

HSP 1 Score: 83.2 bits (204), Expect = 7.070e-17
Identity = 40/67 (59.70%), Postives = 47/67 (70.15%), Query Frame = 1
Query:   28 ASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVGEFGTGVVGEDGKIDRRALGALVFSDK 228
            ASGKS + K L   G  V+DCD++GH  Y PG+ GFR VV EFG  VVG DG I+RRALGA VF D+
Sbjct:  383 ASGKSAVCKRLEGQGAAVIDCDKLGHKAYLPGTQGFRRVVAEFGQDVVGSDGSINRRALGAKVFQDR 449          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74850.17695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1L8DZI0_9DIPT7.640e-1850.00CTP_transf_like domain-containing protein n=2 Tax=... [more]
A0A1B0CL29_LUTLO8.170e-1851.28S-(hydroxymethyl)glutathione dehydrogenase n=2 Tax... [more]
A0A535AAC1_9DELT1.310e-1761.54Dephospho-CoA kinase n=2 Tax=Deltaproteobacteria b... [more]
A0A7G3AT34_LUTLO1.440e-1751.28CTP_transf_like domain-containing protein n=1 Tax=... [more]
A0A1B0DBI0_PHLPP1.960e-1751.28Bifunctional phosphopantetheine adenyltransferase ... [more]
A0A2E0Y505_9GAMM2.160e-1760.61Dephospho-CoA kinase n=1 Tax=Gammaproteobacteria b... [more]
A0A6B2EIL2_9DIPT2.680e-1747.44CTP_transf_like domain-containing protein (Fragmen... [more]
UPI0014256ABC2.910e-1752.00bifunctional coenzyme A synthase-like n=1 Tax=Anne... [more]
A0A8B8A041_ACAPL3.990e-1759.70bifunctional coenzyme A synthase-like isoform X3 n... [more]
A0A8B8A036_ACAPL7.070e-1759.70bifunctional coenzyme A synthase-like isoform X1 n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74850contigM-pyrifera_M_contig74850:1..234 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score80.9
Seed ortholog evalue3e-13
Seed eggNOG ortholog43151.ADAC001350-PA
KEGG rclassRC00002,RC00078
KEGG koko:K02318
KEGG ReactionR00130,R03035
KEGG Pathwayko00770,ko01100,map00770,map01100
KEGG ModuleM00120
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001667,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0003006,GO:0003674,GO:0003824,GO:0004140,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006928,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007300,GO:0007303,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009987,GO:0010631,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016477,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030707,GO:0030855,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0040011,GO:0042592,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044703,GO:0046390,GO:0046483,GO:0046907,GO:0048468,GO:0048477,GO:0048513,GO:0048563,GO:0048569,GO:0048609,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048856,GO:0048869,GO:0048870,GO:0048878,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0055086,GO:0055088,GO:0055090,GO:0060429,GO:0060562,GO:0065007,GO:0065008,GO:0070328,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090130,GO:0090132,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Dephospho-CoA kinase
EggNOG OGs38H33@33154,3BCJW@33208,3CSPG@33213,3SI0E@50557,41UPE@6656,44XX0@7147,45BZ2@7148,COG0237@1,COG1019@1,KOG3220@2759,KOG3351@2759
EC2.7.1.24,2.7.7.3
COG Functional cat.H
Best tax levelNematocera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size234
Cds size234
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816646.8559828-CDS-M-pyrifera_M_contig74850:0..2341622816646.8559828-CDS-M-pyrifera_M_contig74850:0..234Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74850 1..234 -
1692278096.8750482-CDS-M-pyrifera_M_contig74850:0..2341692278096.8750482-CDS-M-pyrifera_M_contig74850:0..234Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74850 1..234 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74850.17695.1prot_M-pyrifera_M_contig74850.17695.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74850 1..234 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74850.17695.1

>prot_M-pyrifera_M_contig74850.17695.1 ID=prot_M-pyrifera_M_contig74850.17695.1|Name=mRNA_M-pyrifera_M_contig74850.17695.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
HLILFLRAAASGKSTMAKALRKSGYVVVDCDQVGHALYEPGSDGFRAVVG
EFGTGVVGEDGKIDRRALGALVFSDKKK
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mRNA from alignment at M-pyrifera_M_contig74850:1..234-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74850.17695.1 ID=mRNA_M-pyrifera_M_contig74850.17695.1|Name=mRNA_M-pyrifera_M_contig74850.17695.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=234bp|location=Sequence derived from alignment at M-pyrifera_M_contig74850:1..234- (Macrocystis pyrifera P11B4 male)
CATCTAATTCTCTTTTTACGTGCAGCTGCGAGTGGAAAGTCGACAATGGC GAAAGCCCTTCGTAAATCGGGGTATGTGGTGGTAGATTGCGATCAGGTCG GTCATGCATTGTATGAACCTGGGAGTGATGGCTTCCGTGCGGTGGTGGGT GAGTTCGGAACTGGTGTGGTTGGGGAGGATGGTAAAATTGACCGTCGTGC ATTGGGTGCGCTGGTGTTTTCTGACAAGAAAAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74850:1..234-

>mRNA_M-pyrifera_M_contig74850.17695.1 ID=mRNA_M-pyrifera_M_contig74850.17695.1|Name=mRNA_M-pyrifera_M_contig74850.17695.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig74850:1..234- (Macrocystis pyrifera P11B4 male)
CATCTAATTCTCTTTTTACGTGCAGCTGCGAGTGGAAAGTCGACAATGGC
GAAAGCCCTTCGTAAATCGGGGTATGTGGTGGTAGATTGCGATCAGGTCG
GTCATGCATTGTATGAACCTGGGAGTGATGGCTTCCGTGCGGTGGTGGGT
GAGTTCGGAACTGGTGTGGTTGGGGAGGATGGTAAAATTGACCGTCGTGC
ATTGGGTGCGCTGGTGTTTTCTGACAAGAAAAAGCATCTAATTCTCTTTT
TACGTGCAGCTGCGAGTGGAAAGTCGACAATGGCGAAAGCCCTTCGTAAA
TCGGGGTATGTGGTGGTAGATTGCGATCAGGTCGGTCATGCATTGTATGA
ACCTGGGAGTGATGGCTTCCGTGCGGTGGTGGGTGAGTTCGGAACTGGTG
TGGTTGGGGAGGATGGTAAAATTGACCGTCGTGCATTGGGTGCGCTGGTG
TTTTCTGACAAGAAAAAG
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