mRNA_M-pyrifera_M_contig7483.17688.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7483.17688.1 vs. uniprot
Match: A0A6H5KLL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL3_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 1.970e-155 Identity = 309/530 (58.30%), Postives = 355/530 (66.98%), Query Frame = 1 Query: 25 RSAEARNTAVLLILVLDQIETVGLADQLETNIVGEALPVAIKCMNQYALAADVGSHRLRVRAGNPDVVLSFGRAVGGGGDXXXXXXXEQPATEEANKPWGCTVLEGLYLDGQGEVQDYWAMALRRS----RQT-LAGLPEMLAGMCEGSSSASSKGLDCGGLVGFLHASEQYQLALPLVGVAVEWQWRLKHVTSPPPXXXXXXXXXXXXXASTAVLTAIARGFLYSAEAVARSGGRGLSSAGSLLDAATGWYIKASQPLRASLFRPDGNASGGVTVAGRGGVGGVGGEVVVKHYEDALAEMERVRDRAKRGGLGGXXXXXXXXXXXXXXXXXXX---------DFGDRGAVNALELARAALATERDLRASVGVSQ------RQARLCQLVFKHASEALSFAEAFDAICDNPVGQQRKENLEALTQHMCESGRLGELCSLALEDCPCSDDDMNASRGCVETPWKAAAVVEDSMWRLALRSRISDLVGGGVGXXXXXXXKRKANYFDCLYAFYVGKGEMVEAARAQDELRER 1554 RSAEARNTAV+L+LVL+Q++ +GLADQLE NIV ALP+A+KCMNQ+AL+A+VGSH LRVR G V G G GGD QPA+ A+KPWGCT LEGL+LD G VQDYWAM+ S RQ L G+P +LAGMCEG+ + LD GGL+ FLHA++QYQLALPLVG+AVEWQWR+K AVLT+IARGFLYSAEA ARS G G S+GSLLD AT WY+K+SQ LRA L R GG G E+VVKH+EDAL E+ERVR+ KR XXXXXXXXXXXXXXXXXXX DFG RG VNALELARAAL TER+LR S G Q R+ARLCQLVFKHASEAL F EAFDA+CDNP+ QQRKENL AL QHMCESGRLGELCSL+L DCP D W + VVE ++W LA RS + DLVGG G + + NY+DCLYAFY+ +GE V AARAQDELRER Sbjct: 484 RSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPLALKCMNQHALSAEVGSHHLRVRGGTHPVASRRGGRSGWGGDA-------QPASVAASKPWGCTALEGLFLDSWGVVQDYWAMSTEASARGGRQLGLGGVPSLLAGMCEGTLRSHLTDLDSGGLISFLHANQQYQLALPLVGLAVEWQWRMK------------------VEPHAAVLTSIARGFLYSAEAAARSEGGGSPSSGSLLDRATKWYLKSSQALRAQLLRSS------------GGGGDNQAELVVKHFEDALLEVERVREGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAGGQQPHQPHQRKARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALAQHMCESGRLGELCSLSLADCPRGGD------------WHTSRVVERALWPLARRSSVDDLVGGPCGKG-----RSRVNYYDCLYAFYMARGEEVAAARAQDELRER 959
BLAST of mRNA_M-pyrifera_M_contig7483.17688.1 vs. uniprot
Match: D7FXJ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXJ0_ECTSI) HSP 1 Score: 489 bits (1260), Expect = 1.830e-153 Identity = 320/528 (60.61%), Postives = 362/528 (68.56%), Query Frame = 1 Query: 25 RSAEARNTAVLLILVLDQIETVGLADQLETNIVGEALPVAIKCMNQYALAADVGSHRLRVRAGNPDVVLSFGRAVGGGGDXXXXXXXEQPATEEANKPWGCTVLEGLYLDGQGEVQDYWAM---ALRRSRQT-LAGLPEMLAGMCEGSSSASSKGLDCGGLVGFLHASEQYQLALPLVGVAVEWQWRLKHVTSPPPXXXXXXXXXXXXXASTAVLTAIARGFLYSAEAVARSGGRGLSSAGSLLDAATGWYIKASQPLRASLFRPDGNASGGVTVAGRGGVGGVGGEVVVKHYEDALAEMERVRDRAKRGGLGGXXXXXXXXXXXXXXXXXXX---------DFGDRGAVNALELARAALATERDLRASVG------VSQRQARLCQLVFKHASEALSFAEAFDAICDNPVGQQRKENLEALTQHMCESGRLGELCSLALEDCPCSDDDMNASRGCVETPWKAAAVVEDSMWRLALRSRISDLVGGGVGXXXXXXXKRKANYFDCLYAFYVGKGEMVEAARAQDELRE 1551 RSAEARNTAV+L+LVL+Q++ +GLADQLE NIV ALPVA+KCMNQYAL+A+VGSH LRVR G V G G GG QPA+ A+KPWGCT LEGL+LD +G VQDYWAM A R RQ L G+P +LAGMCEG+ + GLD GGLV FLHASEQYQLALPLVG+AVEWQWR+K XXXXXXX TAVLT+IARGFLYSAEA ARS G G SS+G LLD AT WY+K+SQ LRA L RP G GG A E VV+H+E AL E+ERVR+ +R XXXXXXXXXXXXXXXXXXX DFG RG VNALELARAAL TER+LR S G QRQARLCQLVFKHASEAL F EAFDA+CDNP+ QQRKENL AL QHMCESGRLGELCSL+L DCP W + VV+ ++W LA RS + DLVGG G + + NY+DCLYAFY+ +GE V AARAQDELRE Sbjct: 888 RSAEARNTAVVLMLVLEQVDRLGLADQLEANIVATALPVALKCMNQYALSAEVGSHHLRVRGGTHPVASWRGGRSGWGGGGGIGDA--QPASVAASKPWGCTALEGLFLDSRGVVQDYWAMSTEASTRGRQLGLGGVPSLLAGMCEGTLRSHLTGLDSGGLVSFLHASEQYQLALPLVGLAVEWQWRMK-------VGXXXXXXXHRPEPHTAVLTSIARGFLYSAEAAARSEGGGSSSSGPLLDRATKWYLKSSQALRAQLLRPGGG--GGHNQA----------ESVVEHFEGALLEVERVREGLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDFGGRGPVNALELARAALETERELRGSAGDQXXXXXXQRQARLCQLVFKHASEALCFREAFDAVCDNPIDQQRKENLAALVQHMCESGRLGELCSLSLADCPHGGG------------WHPSGVVDSALWPLARRSSVDDLVGGPGGKG-----RSRVNYYDCLYAFYMARGEEVAAARAQDELRE 1377 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7483.17688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7483.17688.1 >prot_M-pyrifera_M_contig7483.17688.1 ID=prot_M-pyrifera_M_contig7483.17688.1|Name=mRNA_M-pyrifera_M_contig7483.17688.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=519bp MLPCLVFARSAEARNTAVLLILVLDQIETVGLADQLETNIVGEALPVAIKback to top mRNA from alignment at M-pyrifera_M_contig7483:2789..12160- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7483.17688.1 ID=mRNA_M-pyrifera_M_contig7483.17688.1|Name=mRNA_M-pyrifera_M_contig7483.17688.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9372bp|location=Sequence derived from alignment at M-pyrifera_M_contig7483:2789..12160- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7483:2789..12160- >mRNA_M-pyrifera_M_contig7483.17688.1 ID=mRNA_M-pyrifera_M_contig7483.17688.1|Name=mRNA_M-pyrifera_M_contig7483.17688.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3114bp|location=Sequence derived from alignment at M-pyrifera_M_contig7483:2789..12160- (Macrocystis pyrifera P11B4 male)back to top |