mRNA_M-pyrifera_M_contig74764.17681.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74764.17681.1
Unique NamemRNA_M-pyrifera_M_contig74764.17681.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A5A8DDU8_CAFRO (DNA helicase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDU8_CAFRO)

HSP 1 Score: 178 bits (452), Expect = 1.820e-50
Identity = 116/244 (47.54%), Postives = 150/244 (61.48%), Query Frame = 1
Query:    7 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFD-LQDKRDMRKQSKVLNDDTWD-DPVHGCRARLLQNILGEEG-------GGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEY 711
            LL  H+    DKIIVFS++   L   A  LG  ++HG    KERE  ++AFR   +V VLFLS+VGDVALD+PDANVIIQISSH+GSR+QEAQR+GRILR    + +    SG +AFFYTL+S DT E+ +SLRRRRYLVDQGYAYKV+  F  L  K  ++  +K L  +      +    +  L  I G+E        G    + E E   +       A+ RA SM++LSG +GLRY+EY
Sbjct:  135 LLERHKARADDKIIVFSDSRFALERYATALGELMIHGDTTMKEREVILAAFREDPSVKVLFLSKVGDVALDVPDANVIIQISSHYGSRMQEAQRMGRILR---KKKSSKLASGNHAFFYTLLSTDTEEVAWSLRRRRYLVDQGYAYKVLTTFPGLASKAALQASAKFLQSEAEQRSTLVEVLSSRLATIEGKEAKEAARLSGSTQRQAELEGPHQEWTPNASAKVRA-SMSELSGGSGLRYIEY 374          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A812RKQ7_9DINO (DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RKQ7_9DINO)

HSP 1 Score: 179 bits (455), Expect = 3.740e-48
Identity = 117/244 (47.95%), Postives = 151/244 (61.89%), Query Frame = 1
Query:    7 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFD-LQDKRDMRKQSKVLNDDTWD-DPVHGCRARLLQNILGEEG-------GGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEY 711
            LL  H+    DKIIVFS++   L   A  LG  ++HG    KERE  ++AFR   +V VLFLS+VGDVALD+PDANVIIQISSH+GSR+QEAQR+GRILR    + +    SG +AFFYTL+S DT E+ +SLRRRRYLVDQGYAYKV+ AF  L  K  ++  +K L  +      +    +  L  I G+E        G    + E E   +       A+ RA SM++LSG +GLRY+EY
Sbjct:  691 LLERHKARADDKIIVFSDSRFALERYATALGELMIHGDTTMKEREVILAAFREDPSVKVLFLSKVGDVALDVPDANVIIQISSHYGSRMQEAQRMGRILR---KKKSSKLASGNHAFFYTLLSTDTEEVAWSLRRRRYLVDQGYAYKVLTAFPGLGSKAALQASAKFLQSEAEQRSTLVEVLSSRLATIEGKEAKEAARLSGSTQRQAELEGPHQEWTPNASAKVRA-SMSELSGGSGLRYIEY 930          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S0FGE9_9STRA (DNA helicase (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FGE9_9STRA)

HSP 1 Score: 161 bits (408), Expect = 6.960e-46
Identity = 105/233 (45.06%), Postives = 149/233 (63.95%), Query Frame = 1
Query:   34 GDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEES--EKEGKKGGMEA----QRRAVS-MAQLSGAAGLRYVE 708
            GDK+IVFS+ +  L   AD L   +++G+ P +ER+A +  FRS+DAV  + +S+VGD ++D+P+ANVIIQ+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V   +L ++ DM  +   +N+  +  P       LL+ +L  +     E+ +E++   K    G   A    +R A S MAQLSG +G+RY E
Sbjct:    1 GDKVIVFSDLVYSLKMYADMLKRPLIYGETPERERQAILGTFRSTDAVRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYTLVSTDTQEMFYSAKRQQYLIDQGYTFKIVT--NLSERADMEAK---INNYIYSTPEKD--RSLLRILLTSDTEMEKEQRQEDTAIRKSNADGAALADAGVKRTAGSTMAQLSGGSGMRYRE 226          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: B7G0F2_PHATC (DNA helicase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0F2_PHATC)

HSP 1 Score: 171 bits (432), Expect = 1.800e-45
Identity = 109/242 (45.04%), Postives = 152/242 (62.81%), Query Frame = 1
Query:    7 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEES-----EKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEYS 714
            L+R H+   GDKIIVFS+ +  L   A+ L   +++G+ P +ER+A +  FR+SDAV  + +S+VGD ++D+P+ANVIIQ+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V   +L +K D      + N  T+  P      +LL+ +L  E     E+  E++       +G      A ++  SMAQLSG  GLRY E+S
Sbjct:  470 LVRFHEAR-GDKIIVFSDLVYSLKLYAEMLKKPLIYGETPERERQAILGTFRASDAVRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQQDGSNRSTFNAFFYTLVSSDTQEMFYSAKRQQYLIDQGYTFKIVT--NLCEKADAEA---IANGCTFATPEDD--RKLLRTVLTSETDLEKEQRAEDTAIRKNNTDGAALADAASKKTTSMAQLSGGTGLRYKEFS 703          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S0WRF2_9CHLO (DNA helicase n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WRF2_9CHLO)

HSP 1 Score: 167 bits (424), Expect = 4.990e-45
Identity = 103/235 (43.83%), Postives = 149/235 (63.40%), Query Frame = 1
Query:    7 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEY 711
            L+  H++   DK+IVFS+ +  L   A +LG   ++G     ER   + AF++   VN +FLS+VGD +LDIP+ANV+IQISSH GSR QEAQRLGRILR    ++ G  V+ +NAFFYTL+S+DT EM+YS +R+++L+DQGYA+KVV       +  M  Q ++   ++  D +     R+L   L E G  AL + ++  E E  K    A+R  V++ +L+GAAG RY+EY
Sbjct:  289 LIAWHERERKDKVIVFSDNIWALREYATRLGKPFIYGPTSHAERTRVLHAFKNDPNVNTVFLSKVGDNSLDIPEANVLIQISSHAGSRRQEAQRLGRILRAKRAKSIGAQVNEYNAFFYTLVSQDTQEMYYSTKRQQFLIDQGYAFKVVTNLVETAQEAMAGQLQLATKESQLDLL----CRVLTAGLEEAGTEALRD-DDGDEMEAAKKRPGAKRSVVNVRELTGAAGARYIEY 518          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S1ZYY8_TRICV (DNA helicase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYY8_TRICV)

HSP 1 Score: 155 bits (392), Expect = 9.590e-44
Identity = 77/141 (54.61%), Postives = 105/141 (74.47%), Query Frame = 1
Query:   34 GDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVV 453
            GDKIIVFS+ +  L   AD L   +++G+ P +ER+A +  FR++DA+  + +S+VGD ++D+P+AN++IQ SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS RR++YL+DQGY +K+V
Sbjct:    4 GDKIIVFSDLVYSLKMYADMLKRPLIYGETPERERQAILGTFRATDALRTICISKVGDTSIDLPEANIVIQASSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYTLVSTDTQEMFYSARRQQYLIDQGYTFKIV 144          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A250WWA4_9CHLO (DNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWA4_9CHLO)

HSP 1 Score: 165 bits (417), Expect = 4.970e-43
Identity = 108/250 (43.20%), Postives = 145/250 (58.00%), Query Frame = 1
Query:    7 LLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVV--------------GAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEYS 714
            L+  H+   GDK+IVFS+ +  L   A  LG   ++G     ER   + AF+    VN +FLS+VGD +LDIP+ANV+IQISSH GSR QEAQRLGRILR    +A  G    FNAFFYTL+S DT EM+YS +R+++L+DQGY++KV+              G F  Q K+ +   S+VL        V G     ++ +LG++ G  L           K GG   +R A SMA LSGA+G+ Y+EYS
Sbjct:  666 LINFHEGQRGDKVIVFSDNIWALREYATLLGKPFIYGPTGHAERTRVLHAFKHDPNVNTVFLSKVGDNSLDIPEANVLIQISSHAGSRRQEAQRLGRILRAKQGKAGSGQEGEFNAFFYTLVSRDTQEMYYSTKRQQFLIDQGYSFKVITNLLEAAEESQLAQGHFTTQ-KQQLDLLSRVL--------VAGLEEAGVE-VLGDKDGDTLAAV--------KAGGARRRRDAGSMAALSGASGMSYLEYS 897          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A812WA80_SYMMI (DNA helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WA80_SYMMI)

HSP 1 Score: 156 bits (394), Expect = 1.070e-42
Identity = 81/151 (53.64%), Postives = 110/151 (72.85%), Query Frame = 1
Query:    1 EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVV 453
            E L++ H+   GDKII+FS+ +  L    ++L    ++G     ER   ++ F++   VNV+ LS+VGD ALDIP+ANVIIQ+SSHFG+R QEAQRLGRILR  + + AG  V+GFNAFFYTL+S DT EM++S +R++YLVDQGY +KVV
Sbjct:   84 EYLVKVHEAR-GDKIIIFSDDIVALTIYCEKLHCPYIYGATSEDERRVWLNGFKNRRDVNVIGLSKVGDTALDIPEANVIIQVSSHFGARRQEAQRLGRILRPKASQLAGHVVTGFNAFFYTLVSTDTREMYFSTKRQQYLVDQGYTFKVV 233          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A448Z8T1_9STRA (DNA helicase n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z8T1_9STRA)

HSP 1 Score: 163 bits (412), Expect = 1.580e-42
Identity = 100/244 (40.98%), Postives = 153/244 (62.70%), Query Frame = 1
Query:    1 EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEEGEEES--EKEGKKGGMEAQRRA-----VSMAQLSGAAGLRYVE 708
            E L+R H++  GDKIIVFS+ +  L   A+ L   +++G+ P +ER+A +  FR++DA+  + +S+VGD ++D+P+ANVI+Q+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V   +L +K     ++ +  D+++          +L+ ++  E     E+  E++   K    G   A  R      +SM+Q+SG +G+RY E
Sbjct:  526 EFLVRFHEQR-GDKIIVFSDLVYSLKLYAEMLKKPLIYGETPERERQAILGTFRATDALRTICISKVGDTSIDLPEANVIVQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNKSSFNAFFYTLVSSDTQEMFYSAKRQQYLIDQGYTFKIVT--NLCEKAAEDAKNLIGTDNSYAFSTAADDRDMLRKVMNSETDLDKEQRAEDAAIRKSNPDGAHMADARTKRTGGMSMSQVSGGSGMRYKE 766          
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Match: A0A7S2P0V4_9STRA (DNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P0V4_9STRA)

HSP 1 Score: 157 bits (396), Expect = 1.880e-42
Identity = 84/163 (51.53%), Postives = 116/163 (71.17%), Query Frame = 1
Query:    1 EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARISAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRILRIGS-DRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKVVGAFDLQDKRDM 486
            E L+R H++  GDKIIVFS+ +  L   A  L   +++G+   +ER+A +  FR+SDA+  + +S+VGD ++D+P+ANVIIQ+SSHFGSR QEAQRLGRILR  S  +  G   S FNAFFYTL+S DT EM YS +R++YL+DQGY +K+V    L +K D+
Sbjct:  126 EFLMRFHEER-GDKIIVFSDLVYSLKLYAAMLKRPMIYGETSERERQAILGTFRTSDALRTICISKVGDTSIDLPEANVIIQVSSHFGSRRQEAQRLGRILRPKSYTQTDGSNRSSFNAFFYTLVSTDTQEMFYSTKRQQYLIDQGYTFKIVTT--LSEKADL 285          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74764.17681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DDU8_CAFRO1.820e-5047.54DNA helicase n=3 Tax=Cafeteria roenbergensis TaxID... [more]
A0A812RKQ7_9DINO3.740e-4847.95DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7S0FGE9_9STRA6.960e-4645.06DNA helicase (Fragment) n=1 Tax=Minutocellus polym... [more]
B7G0F2_PHATC1.800e-4545.04DNA helicase n=2 Tax=Phaeodactylum tricornutum Tax... [more]
A0A7S0WRF2_9CHLO4.990e-4543.83DNA helicase n=1 Tax=Chlamydomonas leiostraca TaxI... [more]
A0A7S1ZYY8_TRICV9.590e-4454.61DNA helicase (Fragment) n=1 Tax=Trieres chinensis ... [more]
A0A250WWA4_9CHLO4.970e-4343.20DNA helicase n=1 Tax=Chlamydomonas eustigma TaxID=... [more]
A0A812WA80_SYMMI1.070e-4253.64DNA helicase n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A448Z8T1_9STRA1.580e-4240.98DNA helicase n=2 Tax=Pseudo-nitzschia TaxID=41953 ... [more]
A0A7S2P0V4_9STRA1.880e-4251.53DNA helicase n=1 Tax=Skeletonema marinoi TaxID=267... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74764contigM-pyrifera_M_contig74764:1..714 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score172.2
Seed ortholog evalue3e-40
Seed eggNOG ortholog2850.Phatr20574
Preferred nameERCC3
KEGG koko:K10843,ko:K11270
KEGG Pathwayko03022,ko03420,map03022,map03420
KEGG ModuleM00290
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000109,GO:0000112,GO:0000166,GO:0000428,GO:0000439,GO:0000717,GO:0000988,GO:0000990,GO:0000991,GO:0001109,GO:0001111,GO:0001112,GO:0001113,GO:0001120,GO:0001666,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005675,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006281,GO:0006283,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006361,GO:0006363,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006464,GO:0006468,GO:0006611,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007275,GO:0007346,GO:0007399,GO:0008022,GO:0008026,GO:0008094,GO:0008104,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0008544,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009452,GO:0009628,GO:0009650,GO:0009790,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009913,GO:0009987,GO:0010224,GO:0010467,GO:0010468,GO:0010525,GO:0010528,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010628,GO:0010941,GO:0010942,GO:0012501,GO:0015031,GO:0015616,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0016310,GO:0016462,GO:0016591,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016973,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0022008,GO:0022607,GO:0030154,GO:0030182,GO:0030554,GO:0030855,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031503,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032806,GO:0032991,GO:0032993,GO:0033036,GO:0033554,GO:0033683,GO:0034367,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0035315,GO:0035639,GO:0036094,GO:0036211,GO:0036260,GO:0036293,GO:0040008,GO:0042127,GO:0042623,GO:0042886,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044798,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0047485,GO:0048513,GO:0048518,GO:0048522,GO:0048568,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0050896,GO:0051028,GO:0051052,GO:0051098,GO:0051101,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051252,GO:0051254,GO:0051276,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0055029,GO:0060255,GO:0060429,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070035,GO:0070482,GO:0070727,GO:0070816,GO:0070911,GO:0071103,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090575,GO:0097159,GO:0097367,GO:0097550,GO:0097659,GO:0140097,GO:0140110,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901987,GO:1901990,GO:1902494,GO:1902554,GO:1902680,GO:1902911,GO:1903025,GO:1903506,GO:1903508,GO:1990234,GO:1990391,GO:2000112,GO:2000677,GO:2001141
EggNOG free text desc.ERCC3/RAD25/XPB C-terminal helicase
EggNOG OGs2XBSV@2836,COG1061@1,KOG1123@2759
Ec32 ortholog descriptionHelicase
Ec32 orthologEc-15_000350.1
EC3.6.4.12
COG Functional cat.A
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03021,ko03036,ko03400
Exons1
Model size714
Cds size714
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816646.1174812-CDS-M-pyrifera_M_contig74764:0..7141622816646.1174812-CDS-M-pyrifera_M_contig74764:0..714Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74764 1..714 +
1692278096.489422-CDS-M-pyrifera_M_contig74764:0..7141692278096.489422-CDS-M-pyrifera_M_contig74764:0..714Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74764 1..714 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74764.17681.1prot_M-pyrifera_M_contig74764.17681.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74764 1..714 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74764.17681.1

>prot_M-pyrifera_M_contig74764.17681.1 ID=prot_M-pyrifera_M_contig74764.17681.1|Name=mRNA_M-pyrifera_M_contig74764.17681.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
EALLRAHQKTPGDKIIVFSEALAPLITLADQLGHYVVHGKVPAKEREARI
SAFRSSDAVNVLFLSRVGDVALDIPDANVIIQISSHFGSRLQEAQRLGRI
LRIGSDRAAGGGVSGFNAFFYTLISEDTSEMHYSLRRRRYLVDQGYAYKV
VGAFDLQDKRDMRKQSKVLNDDTWDDPVHGCRARLLQNILGEEGGGALEE
GEEESEKEGKKGGMEAQRRAVSMAQLSGAAGLRYVEYS
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mRNA from alignment at M-pyrifera_M_contig74764:1..714+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74764.17681.1 ID=mRNA_M-pyrifera_M_contig74764.17681.1|Name=mRNA_M-pyrifera_M_contig74764.17681.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig74764:1..714+ (Macrocystis pyrifera P11B4 male)
GAAGCACTTCTCCGTGCCCATCAAAAGACTCCAGGTGACAAGATCATTGT GTTTTCTGAAGCACTTGCACCTCTGATTACCCTCGCGGACCAACTCGGCC ACTACGTTGTGCATGGGAAAGTTCCTGCCAAAGAACGTGAAGCACGAATC AGTGCATTCCGATCATCGGATGCAGTGAACGTCCTCTTCCTCTCCCGTGT GGGTGATGTTGCCTTGGATATTCCTGATGCGAACGTCATCATCCAAATCT CTTCCCACTTTGGATCGCGGCTGCAAGAAGCACAGCGACTTGGTCGGATT CTTCGTATTGGTAGTGATCGTGCAGCAGGAGGTGGTGTGAGTGGGTTTAA CGCATTTTTCTACACTCTTATCAGCGAAGACACTTCTGAGATGCATTATT CCTTGCGTCGAAGGCGGTATTTGGTGGATCAAGGCTATGCTTACAAAGTT GTTGGAGCATTTGATCTGCAAGACAAGCGAGACATGCGCAAGCAATCAAA AGTACTCAATGATGACACTTGGGATGATCCAGTCCATGGGTGTCGTGCAA GGTTGCTTCAAAATATTTTGGGTGAAGAAGGGGGTGGTGCGTTGGAGGAG GGTGAGGAAGAGAGTGAGAAAGAAGGGAAGAAAGGAGGGATGGAAGCACA GCGTCGCGCTGTTTCAATGGCACAATTGTCAGGGGCAGCAGGTCTTCGAT ATGTTGAGTATTCT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74764:1..714+

>mRNA_M-pyrifera_M_contig74764.17681.1 ID=mRNA_M-pyrifera_M_contig74764.17681.1|Name=mRNA_M-pyrifera_M_contig74764.17681.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig74764:1..714+ (Macrocystis pyrifera P11B4 male)
GAAGCACTTCTCCGTGCCCATCAAAAGACTCCAGGTGACAAGATCATTGT
GTTTTCTGAAGCACTTGCACCTCTGATTACCCTCGCGGACCAACTCGGCC
ACTACGTTGTGCATGGGAAAGTTCCTGCCAAAGAACGTGAAGCACGAATC
AGTGCATTCCGATCATCGGATGCAGTGAACGTCCTCTTCCTCTCCCGTGT
GGGTGATGTTGCCTTGGATATTCCTGATGCGAACGTCATCATCCAAATCT
CTTCCCACTTTGGATCGCGGCTGCAAGAAGCACAGCGACTTGGTCGGATT
CTTCGTATTGGTAGTGATCGTGCAGCAGGAGGTGGTGTGAGTGGGTTTAA
CGCATTTTTCTACACTCTTATCAGCGAAGACACTTCTGAGATGCATTATT
CCTTGCGTCGAAGGCGGTATTTGGTGGATCAAGGCTATGCTTACAAAGTT
GTTGGAGCATTTGATCTGCAAGACAAGCGAGACATGCGCAAGCAATCAAA
AGTACTCAATGATGACACTTGGGATGATCCAGTCCATGGGTGTCGTGCAA
GGTTGCTTCAAAATATTTTGGGTGAAGAAGGGGGTGGTGCGTTGGAGGAG
GGTGAGGAAGAGAGTGAGAAAGAAGGGAAGAAAGGAGGGATGGAAGCACA
GCGTCGCGCTGTTTCAATGGCACAATTGTCAGGGGCAGCAGGTCTTCGAT
ATGTTGAGTATTCTGAAGCACTTCTCCGTGCCCATCAAAAGACTCCAGGT
GACAAGATCATTGTGTTTTCTGAAGCACTTGCACCTCTGATTACCCTCGC
GGACCAACTCGGCCACTACGTTGTGCATGGGAAAGTTCCTGCCAAAGAAC
GTGAAGCACGAATCAGTGCATTCCGATCATCGGATGCAGTGAACGTCCTC
TTCCTCTCCCGTGTGGGTGATGTTGCCTTGGATATTCCTGATGCGAACGT
CATCATCCAAATCTCTTCCCACTTTGGATCGCGGCTGCAAGAAGCACAGC
GACTTGGTCGGATTCTTCGTATTGGTAGTGATCGTGCAGCAGGAGGTGGT
GTGAGTGGGTTTAACGCATTTTTCTACACTCTTATCAGCGAAGACACTTC
TGAGATGCATTATTCCTTGCGTCGAAGGCGGTATTTGGTGGATCAAGGCT
ATGCTTACAAAGTTGTTGGAGCATTTGATCTGCAAGACAAGCGAGACATG
CGCAAGCAATCAAAAGTACTCAATGATGACACTTGGGATGATCCAGTCCA
TGGGTGTCGTGCAAGGTTGCTTCAAAATATTTTGGGTGAAGAAGGGGGTG
GTGCGTTGGAGGAGGGTGAGGAAGAGAGTGAGAAAGAAGGGAAGAAAGGA
GGGATGGAAGCACAGCGTCGCGCTGTTTCAATGGCACAATTGTCAGGGGC
AGCAGGTCTTCGATATGTTGAGTATTCT
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