mRNA_M-pyrifera_M_contig7473.17675.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A6H5L503_9PHAE (ApbA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L503_9PHAE) HSP 1 Score: 252 bits (643), Expect = 1.910e-79 Identity = 130/179 (72.63%), Postives = 144/179 (80.45%), Query Frame = 1 Query: 1 KGYTHGVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQLELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSRGDGVPSTPAKDLPLAKALSSGGSESTLALQLKV 537 + YTHGVV+FN+VHA AAL G LRDLVRDRHARLLWAAMIREGLQ L+ AA GDWRAANPCC TLPQLEL LCLP+ LF LVS LLLRFP +LAPAMQ DLA GR+T+VAWTLEEIVRIADKHK +AP C +LS VK CVS GDGVPST +DLP L SGGS+S+ AL K+ Sbjct: 228 RSYTHGVVIFNTVHAPAALAGGSLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRIADKHKGSAPACGAVLSAVKKCVSEGDGVPSTRPRDLPFVSELLSGGSDSSRALNRKL 406
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: D7FJE1_ECTSI (2-dehydropantoate 2-reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJE1_ECTSI) HSP 1 Score: 192 bits (489), Expect = 1.930e-59 Identity = 97/122 (79.51%), Postives = 105/122 (86.07%), Query Frame = 1 Query: 1 KGYTHGVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQLELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRI 366 + YTHGVV+FN+VHA AAL G PLRDLVRDRHARLLWAAMIREGLQ L+ AA GDWRAANPCC TLPQLEL LCLP+ LF LVS LLLRFP +LAPAMQ DLA GR+T+VAWTLEEIVRI Sbjct: 74 RSYTHGVVIFNTVHAAAALAGGPLRDLVRDRHARLLWAAMIREGLQALTLAARGGDWRAANPCCGVTLPQLELFLCLPTFLFSLVSGLLLRFPPMLAPAMQADLADGRDTSVAWTLEEIVRI 195
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A257LHM7_9BURK (ApbA_C domain-containing protein n=1 Tax=Burkholderiales bacterium PBB5 TaxID=2015567 RepID=A0A257LHM7_9BURK) HSP 1 Score: 68.6 bits (166), Expect = 3.560e-11 Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 1 Query: 16 GVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQLELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVK 423 G ++ N +AV AL+G+PLR + DRH R AA+I E L VL+RA G A P S + + L P+PLF L++ LLR +M DLA GR T V E++R+A + MAAP+ + M++ V+ Sbjct: 33 GKLLLNLNNAVNALSGLPLRAQLLDRHLRACTAALIDEALAVLTRA-GIRPQSPAGPPPSLVVRVMRL----PTPLFRLLAARLLRIDAQARSSMADDLALGRPTEVDAIQGEVLRLAAQLGMAAPLNTRMVALVQ 163
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A2G6KRZ4_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2G6KRZ4_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 6.220e-9 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 1 KGYTHGVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQ--LELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSRGDGVPSTPAKDL 474 K G ++ N + V AL G+PL + + R R + AA IRE L+VL +A P +P + +L LPS LF LV+R +L+ +MQ DL GR+T V + EI+ + +K + PV +++ VK S G P A+ L Sbjct: 178 KSVQWGKLIMNLNNPVNALAGIPLIEELEQRKYRKVLAASIREALEVLKQAG-------IKPARIGKVPPSLMPAILELPSWLFKLVARAMLKIDPQATSSMQEDLVSGRKTEVDYLNGEIITLGEKSGLQCPVNRKIVALVKESESGRSGSPKLSARRL 330
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A1E3W6N7_9HYPH (2-dehydropantoate 2-reductase n=1 Tax=Methyloceanibacter superfactus TaxID=1774969 RepID=A0A1E3W6N7_9HYPH) HSP 1 Score: 64.3 bits (155), Expect = 6.410e-9 Identity = 52/156 (33.33%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 16 GVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQ--LELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSRGDGVPSTPAKDLP 477 G ++ N +A+ AL+ +PL + + DR RLL + + EGL VL+ AAG P LP + L LP LF L +R ++ +M DL GR T + + EIVR+A+KH +AAP+ ++ +K G G P+ P + P Sbjct: 197 GKLLVNLNNALNALSDLPLIEQLGDRRWRLLISRQMLEGLAVLA-AAG------IRPAPVEGLPPRLIAFALSLPDILFRLAARGMMAIDKTARSSMWEDLRAGRPTEIDYIQGEIVRLAEKHGIAAPLNRQVMQLIKKAEIAGQGSPALPPERSP 345
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A1F6UZK3_9PROT (2-dehydropantoate 2-reductase n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6UZK3_9PROT) HSP 1 Score: 63.5 bits (153), Expect = 1.150e-8 Identity = 50/150 (33.33%), Postives = 77/150 (51.33%), Query Frame = 1 Query: 25 VFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQLELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSRGDGVPSTPAKDL 474 + N +AV+AL+GVPLR+L+ R + A +I E L V +A A P + +L LP+ LF L++R L+ +M DLA GR T V + EIVR+A+KH + AP+ ++ V ++ G P+ A+ L Sbjct: 193 MLNLNNAVSALSGVPLRELLASSGYRHILADLIAEALAVFGKAGIRPARMGAFP-----VQWFPFVLRLPTVLFQLLARAQLKIDPQARSSMWEDLARGRPTEVDYLNGEIVRLAEKHSVDAPLNRRIVELVHDAEAKRSGSPAMSAESL 337
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: UPI0018EF4ACA (2-dehydropantoate 2-reductase n=2 Tax=Leptolyngbya sp. FACHB-541 TaxID=2692810 RepID=UPI0018EF4ACA) HSP 1 Score: 62.4 bits (150), Expect = 2.930e-8 Identity = 48/163 (29.45%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 1 KGYTHGVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLS----RAAGHGDWRAANPCCSATLPQLE-LMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSRGDGVPSTPAKDL 474 G G ++FN +A+ AL G+PLR+ + D R + AA +RE L VL R G G + P + +L LP+ LF+ V+ +++ +M DL G++T + + EIV +A K+ +AAP+ + + +K +G G P+ A ++ Sbjct: 183 SGILWGKLIFNLNNAINALAGIPLREEISDLGYRKIIAAAMREALMVLKQSRIRPTGSGGMQ----------PNVAPFILSLPNFLFLRVASRMIQIDPQARSSMWQDLQQGKKTEIDFINGEIVTLAQKNGLAAPINDKVTTLIKEVEMKGGGSPNISATEM 335
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: UPI001563ED8F (2-dehydropantoate 2-reductase n=1 Tax=Aquabacterium terrae TaxID=2732868 RepID=UPI001563ED8F) HSP 1 Score: 62.0 bits (149), Expect = 3.780e-8 Identity = 52/141 (36.88%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 16 GVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQLELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSR 438 G ++ N +AV AL+G+PLR + DR R AA+I E L VL+ AAG + +P +P+ +L LP+PLF +V+ +LR +M DL GR T V E+VR+A +H + AP+ + S V+ SR Sbjct: 177 GKLLLNLNNAVNALSGLPLRAQLLDRDLRRCTAALIEETLTVLA-AAGIAPAQL-SPLPPRWIPR---VLRLPTPLFRIVAARMLRIDDKARSSMADDLTLGRITEVDALQGEVVRLAQRHGVGAPLNQRIASLVQAWPSR 312
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A0G3BDN8_9BURK (2-dehydropantoate 2-reductase n=1 Tax=Schlegelella brevitalea TaxID=413882 RepID=A0A0G3BDN8_9BURK) HSP 1 Score: 60.8 bits (146), Expect = 9.530e-8 Identity = 51/136 (37.50%), Postives = 72/136 (52.94%), Query Frame = 1 Query: 16 GVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQLELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVK 423 G ++ N + V AL+G+PLR + DRH R L+A ++ E L + RAAG R P A LP L L LP+PLF ++ +LR +M DLA GR T V E+VR+A + AP + M + V+ Sbjct: 190 GKLLLNLNNPVNALSGLPLRAQLLDRHHRRLFADLVDEALSAM-RAAGITPQRL-TPLPWAWLPTL---LRLPTPLFRRLAASMLRIDAHARSSMADDLAQGRPTEVDMLCGEVVRLAARLGRKAPCNAEMQARVE 320
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Match: A0A7X7GJ42_RHOSO (2-dehydropantoate 2-reductase n=1 Tax=Rhodococcus sp. TaxID=1831 RepID=A0A7X7GJ42_RHOSO) HSP 1 Score: 60.1 bits (144), Expect = 1.880e-7 Identity = 45/144 (31.25%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 16 GVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRAAGHGDWRAANPCCSATLPQ--LELMLCLPSPLFILVSRLLLRFPLVLAPAMQTDLAGGRETNVAWTLEEIVRIADKHKMAAPVCSTMLSGVKLCVSRG 441 G ++ N + + AL+G+PLR+ + R R + A E L VL + R P LP L +L +P PLF ++ R +L + +M DL GR T V W E+VR+A+K ++APV + ++ ++ S G Sbjct: 195 GKLLLNLNNPLNALSGLPLREELAQRSYRTVLALAQAEALGVL-------EARGIRPARVTVLPARWLPRVLGVPDPLFRVLGRRMLEIDPMARSSMWEDLEAGRRTEVDWISGEVVRLAEKSGLSAPVNARLVELIRDAESGG 331 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7473.17675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7473.17675.1 >prot_M-pyrifera_M_contig7473.17675.1 ID=prot_M-pyrifera_M_contig7473.17675.1|Name=mRNA_M-pyrifera_M_contig7473.17675.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp KGYTHGVVVFNSVHAVAALTGVPLRDLVRDRHARLLWAAMIREGLQVLSRback to top mRNA from alignment at M-pyrifera_M_contig7473:10580..12686- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7473.17675.1 ID=mRNA_M-pyrifera_M_contig7473.17675.1|Name=mRNA_M-pyrifera_M_contig7473.17675.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2107bp|location=Sequence derived from alignment at M-pyrifera_M_contig7473:10580..12686- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7473:10580..12686- >mRNA_M-pyrifera_M_contig7473.17675.1 ID=mRNA_M-pyrifera_M_contig7473.17675.1|Name=mRNA_M-pyrifera_M_contig7473.17675.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig7473:10580..12686- (Macrocystis pyrifera P11B4 male)back to top |