mRNA_M-pyrifera_M_contig74710.17674.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74710.17674.1
Unique NamemRNA_M-pyrifera_M_contig74710.17674.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A2D8GGE0_9ACTN (Signal recognition particle protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GGE0_9ACTN)

HSP 1 Score: 610 bits (1573), Expect = 8.070e-217
Identity = 314/356 (88.20%), Postives = 332/356 (93.26%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMKQF 1068
            NP QQ++KIVLEELT SLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLA QVGVPVFSEPTDPV+VA KAI EA RTGRDVVIVDTAGRLAIDEALM QV +IS  V PDYTFLV+DAMTGQDAV  A AFN+TL LDGVILTK+DGDARGGAALSVKE+VGKPIAF STGEKL+DFETFHPDRLASRILGMGDVETLIEKAEEAFE EQAEEAAARLMEGTFTL+DFLEQMQQ+KKMGP+GNLMGMMPG+PKEARDVEIDDRQIARIEGII SMTP ER +PD+IDGSRRQRIA G+G+QP +VK LLDQF QMRKMMKQF
Sbjct:   69 NPAQQVIKIVLEELTASLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAGQVGVPVFSEPTDPVDVASKAIAEAERTGRDVVIVDTAGRLAIDEALMEQVRQISGQVQPDYTFLVIDAMTGQDAVNTAKAFNDTLELDGVILTKLDGDARGGAALSVKEVVGKPIAFASTGEKLDDFETFHPDRLASRILGMGDVETLIEKAEEAFEAEQAEEAAARLMEGTFTLDDFLEQMQQIKKMGPIGNLMGMMPGIPKEARDVEIDDRQIARIEGIIRSMTPAERADPDLIDGSRRQRIAQGAGMQPGDVKNLLDQFTQMRKMMKQF 424
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A6B1B121_9ACTN (Signal recognition particle protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B121_9ACTN)

HSP 1 Score: 584 bits (1505), Expect = 1.040e-206
Identity = 297/356 (83.43%), Postives = 329/356 (92.42%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMKQF 1068
            NP QQ++KIVL+ELT SLGGEAM+++YASKPPTVVLMAGLQG+GKTTN+ KLAQWFKKQGR+PLLVGADLQRPAAVEQLRTL  Q+ VPVFSE + PV VARKAI EANRT RDVVIVDTAGRLAIDE LMA++G+IS+AV P YTFLVVDAMTGQDAVT+A AF+ETLALDGVILTK+DGDARGGAALSVKE+VGKPIAF STGEK+EDF+TFHPDRLASRILGMGDVETLIEKAEEAFE EQAE+AAARL+EGTFTLEDFLEQMQQ+KKMGPLGNL+GMMPG+PKEARDVEIDDR +ARIEGII SMTP ER  PD+I+GSRR RIA GSGVQP EV+ L+DQF QMR+MMKQF
Sbjct:   69 NPSQQVIKIVLDELTVSLGGEAMRLSYASKPPTVVLMAGLQGSGKTTNSAKLAQWFKKQGRHPLLVGADLQRPAAVEQLRTLGEQIDVPVFSETSRPVRVARKAIKEANRTARDVVIVDTAGRLAIDEELMAEIGDISSAVQPHYTFLVVDAMTGQDAVTMARAFDETLALDGVILTKLDGDARGGAALSVKEVVGKPIAFASTGEKIEDFDTFHPDRLASRILGMGDVETLIEKAEEAFEAEQAEQAAARLLEGTFTLEDFLEQMQQIKKMGPLGNLVGMMPGIPKEARDVEIDDRHLARIEGIIRSMTPAERIQPDIINGSRRLRIANGSGVQPTEVRQLIDQFSQMRQMMKQF 424
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A7Y1U3W5_9ACTN (Signal recognition particle protein n=3 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y1U3W5_9ACTN)

HSP 1 Score: 531 bits (1369), Expect = 6.490e-186
Identity = 269/356 (75.56%), Postives = 313/356 (87.92%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMKQF 1068
            NP QQIVKIVLEELT+SLGGEAM++T+ +KPPTVVLMAGLQG+GKTTN+ KLA  FK QGRNPLLVGADLQRPAAVEQLRTL AQ+ VPVFSE +DPV+VAR A+ EA R GRDV+I DTAGRLAID  LM +V +IS  ++P YTFLVVDAMTGQDAVTVA +F+ TLALDGVILTK+DGDARGGAALSVKE+VG+PIAF STGEK+++FE F+PDRLASRILGMGD+ETLIEKAE A++ ++AEEAA RL+EG+FTLEDFL+QMQQ+KKMGPLGNL+GMMPG+PKE RDVEI+D Q+AR+E II SMTP ER  P +IDGSRRQRIA GSG QP +V  L+ QF +M+KMMKQF
Sbjct:   69 NPTQQIVKIVLEELTQSLGGEAMQVTFEAKPPTVVLMAGLQGSGKTTNSAKLANLFKSQGRNPLLVGADLQRPAAVEQLRTLGAQIDVPVFSEASDPVQVARSALVEAKRLGRDVIICDTAGRLAIDTELMEEVRQISEVLNPHYTFLVVDAMTGQDAVTVAESFHTTLALDGVILTKLDGDARGGAALSVKEVVGRPIAFASTGEKIDEFEVFYPDRLASRILGMGDIETLIEKAEAAYDEDEAEEAAQRLLEGSFTLEDFLQQMQQIKKMGPLGNLIGMMPGMPKEVRDVEIEDSQVARLEAIIRSMTPEERAKPQLIDGSRRQRIANGSGAQPQDVSGLVKQFAEMQKMMKQF 424
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A6G0A6U5_9ACTN (Signal recognition particle protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A6U5_9ACTN)

HSP 1 Score: 528 bits (1361), Expect = 1.100e-184
Identity = 264/352 (75.00%), Postives = 307/352 (87.22%), Query Frame = 1 
Query:    4 PGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMM 1059
            P QQ++KIV EELT++LGGE M+++YA KPPTVVLMAGLQG+GKTTN  KLA+WFK+QGRNPL+VGADLQRPAAVEQLRTL +Q+ VPV+S P DPV VAR  +++A   GRDVV+VDTAGRLAIDE +M QV +IS AVDPDYTFLVVDAMTGQDAVTVA +F+ETL LDGVILTK+DGDARGGAALSVKE+VGKPIAF S GEK+EDFE FHPDRLA RILGMGD+ TLIEKAEEA+E E+AE+AA RL+EGTFTLEDFL+QMQ +KKMGPL N++GM+PG+PKE +DVEIDDR+IAR+E II SMTP ER +PDVIDGSRR RIA GSG QP +V   + QF +MRKMM
Sbjct:   70 PSQQVIKIVNEELTQTLGGETMRVSYAPKPPTVVLMAGLQGSGKTTNAAKLARWFKQQGRNPLMVGADLQRPAAVEQLRTLGSQIDVPVYSRPADPVTVARDGVEQARDLGRDVVVVDTAGRLAIDEEMMEQVRQISGAVDPDYTFLVVDAMTGQDAVTVAESFHETLDLDGVILTKLDGDARGGAALSVKEVVGKPIAFASVGEKIEDFEQFHPDRLAGRILGMGDMLTLIEKAEEAYEQEEAEKAAERLLEGTFTLEDFLDQMQAIKKMGPLNNVIGMLPGVPKEIKDVEIDDREIARLEAIIRSMTPEERIDPDVIDGSRRSRIARGSGAQPGDVSQFVKQFKEMRKMM 421
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A5Q2RDB3_9ACTN (Signal recognition particle protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RDB3_9ACTN)

HSP 1 Score: 527 bits (1357), Expect = 4.320e-184
Identity = 268/354 (75.71%), Postives = 307/354 (86.72%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMK 1062
            +P QQ++KIV EEL E+LGGE MK+T+ASKPPTVVLMAGLQGAGKTT T KLA+WFK+QGRNPLLVGADLQRPAAVEQLRTL +Q+ VPV+SEPTDPV VA   + EA R GRDVVIVDTAGRLAID  +M QV +IS AVDP YTFLV+DAMTGQDAV+VA AF+ETLALDGVILTK+DGDARGGAALSVKE+VG+PIAF STGEK+ DF+ FHPDRLA RILGMGDV TLIEKAEEAFE ++AE AAARL+EG FTL+DFLEQMQQ+KKMGPL  LMGM+PG+PKE RD EIDDR+IAR+E II SMT  ERT+PD++DGSRR RIA GSG  PN+V  LL QF +++ +MK
Sbjct:   69 SPAQQVIKIVHEELIETLGGETMKVTFASKPPTVVLMAGLQGAGKTTTTAKLARWFKQQGRNPLLVGADLQRPAAVEQLRTLGSQIDVPVWSEPTDPVAVAEGGLAEARRLGRDVVIVDTAGRLAIDAEMMEQVRQISGAVDPHYTFLVIDAMTGQDAVSVAQAFHETLALDGVILTKLDGDARGGAALSVKEVVGRPIAFASTGEKIADFDQFHPDRLAGRILGMGDVLTLIEKAEEAFEKDEAEAAAARLLEGQFTLDDFLEQMQQLKKMGPLQGLMGMLPGVPKEVRDAEIDDREIARVEAIIRSMTIAERTDPDIVDGSRRTRIANGSGTSPNQVAQLLKQFKEVQSLMK 422
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: UPI001AA08639 (signal recognition particle protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA08639)

HSP 1 Score: 525 bits (1351), Expect = 4.810e-183
Identity = 267/354 (75.42%), Postives = 304/354 (85.88%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMK 1062
            +P QQ+VKIV EELT +LGGE  ++T++ KPPTVVLMAGLQG+GKTTN+ KLA+WFK QGRNPLLVGADLQRPAAVEQLRTL +Q+ VPVFSEPTDPV VAR++++EA   GRDVVIVDTAGRLAID  LM QV +ISAAVDPDYTFLV+DAMTGQDAV  A AF+E L LDGVILTK+DGDARGGAALSVKE+VGKPIAF STGEKL++F+ FHPDRLA RILGMGD+ TLIEKAEE FE EQAE AAARL+EG FTLEDFLEQMQQ+KKMGPL  L+GM+PG+PKE RD +IDDR+IARIE II SMTP ER +PD ID SRR RIA GSG QP +V  LL QF ++ +MMK
Sbjct:   69 SPAQQVVKIVNEELTRTLGGETFRLTFSPKPPTVVLMAGLQGSGKTTNSAKLARWFKSQGRNPLLVGADLQRPAAVEQLRTLGSQIDVPVFSEPTDPVTVARRSLEEARSLGRDVVIVDTAGRLAIDAELMQQVRDISAAVDPDYTFLVIDAMTGQDAVATAEAFHEALELDGVILTKLDGDARGGAALSVKEVVGKPIAFASTGEKLKEFDLFHPDRLAGRILGMGDMLTLIEKAEEVFEKEQAEAAAARLLEGQFTLEDFLEQMQQIKKMGPLSGLIGMLPGVPKEVRDTQIDDREIARIEAIIRSMTPAERLDPDCIDASRRNRIARGSGTQPAQVSELLKQFKEVSRMMK 422
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A6I3C5D2_9ACTN (Signal recognition particle protein n=2 Tax=root TaxID=1 RepID=A0A6I3C5D2_9ACTN)

HSP 1 Score: 523 bits (1347), Expect = 1.700e-182
Identity = 268/355 (75.49%), Postives = 310/355 (87.32%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMKQ 1065
            NP QQ+VKIV EELTESLGGE +KIT+ASKPPTV+L+AGLQG+GKTTN+ KLA +FKKQGRNPLLVGADLQRPAAVEQLRTL AQ+ VPVFSE +DPV VAR+ ++EA   GRDV+IVDTAGRL+ID  LMAQV EIS AV+P YTFLVVDAMTGQDAVTVA  F+ TL LDGVILTK+DGDARGGAALSVKEIVGKPIAF STGEKL+DFE FHP+RLA RILGMGD+ TLIEKAEE +E +QA+EAA +L+EG FTL+DFLEQMQQ+KKMG L  L+GMMPG+PKE ++V+I+D+Q+AR+EGIIHSMTP ER +PDVID SRR RIA GSGV P +V  L+ QF +MR+MMKQ
Sbjct:   69 NPAQQVVKIVHEELTESLGGETLKITFASKPPTVILLAGLQGSGKTTNSAKLAAYFKKQGRNPLLVGADLQRPAAVEQLRTLGAQINVPVFSEASDPVTVARRGLEEARAKGRDVLIVDTAGRLSIDAELMAQVREISDAVNPHYTFLVVDAMTGQDAVTVAENFHATLNLDGVILTKLDGDARGGAALSVKEIVGKPIAFASTGEKLDDFELFHPNRLADRILGMGDMLTLIEKAEEVYEKDQAQEAATKLLEGQFTLDDFLEQMQQIKKMGSLNKLIGMMPGVPKELKNVQIEDKQLARVEGIIHSMTPAERADPDVIDASRRGRIAKGSGVDPADVTGLVKQFMEMRRMMKQ 423
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A6I3I3J0_9ACTN (Signal recognition particle protein n=17 Tax=root TaxID=1 RepID=A0A6I3I3J0_9ACTN)

HSP 1 Score: 512 bits (1318), Expect = 6.280e-178
Identity = 260/354 (73.45%), Postives = 301/354 (85.03%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMK 1062
            NPGQQ+VKIV +ELT +LGGE ++ITY SKPPTVVLMAGLQG+GKTTN+ KLA+WFK QGR+PLLVGADLQRPAAVEQLRTL  Q+ VPVFSE T+PV+VA+ A+ EA +TGRD+VIVDTAGRLAID  LM +V  IS AVDPDYTFLV+DAMTGQDAV  A AF+ TL LDGVILTK+DGDARGGAALSVKE+VG+PIAF STGEKL DF+ FHPDRLA RILGMGD+ TLIEKAEE FE +QAE AA RL+EG FTLEDFL+QMQQ+KKMGPL  ++GMMPG+PKE ++ +IDDR+IAR+E II SMTP ER +PD+ID SRR RIA GSG +P  V  L+ QF +M KMMK
Sbjct:   69 NPGQQMVKIVNDELTATLGGETIRITYNSKPPTVVLMAGLQGSGKTTNSAKLARWFKSQGRHPLLVGADLQRPAAVEQLRTLGRQIEVPVFSEDTNPVQVAKSALTEARKTGRDIVIVDTAGRLAIDAELMDEVRRISEAVDPDYTFLVIDAMTGQDAVNTAEAFHATLELDGVILTKLDGDARGGAALSVKEVVGRPIAFASTGEKLRDFDLFHPDRLAGRILGMGDMLTLIEKAEEVFEKDQAEAAATRLLEGQFTLEDFLDQMQQLKKMGPLSGVLGMMPGIPKEVKNAQIDDREIARVEAIIRSMTPAERVDPDLIDQSRRVRIATGSGTEPARVGELIKQFKEMSKMMK 422
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: UPI001E374ABC (signal recognition particle protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E374ABC)

HSP 1 Score: 511 bits (1316), Expect = 1.610e-177
Identity = 261/354 (73.73%), Postives = 301/354 (85.03%), Query Frame = 1 
Query:    1 NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMMK 1062
            NPGQQ+VKIV EELT +LGGE +KIT++SKPPTVVLMAGLQG+GKTTN+ KLA WFK+QGR+PLLVGADLQRPAAVEQLRTL  Q+ VPV+SE TDPV VA  A+ EA RTGRDVVIVDTAGRLAID  LM +V  IS AV PDYTFLV+DAMTGQDAV  A AF+ TL LDGVILTK+DGDARGGAALSVKE+VG+PIAF STGEK++DF+ FHPDRLA RILGMGD+ TLIEKAEE FE +QAEEAA +L+EG FT +DFL+QMQQ+KKMGPL  L+GMMPG+PKE R+ EIDDR+IARIE II SMT  ER +PD+ID SRR+RIA GSG  P++V  L+ QF ++ KMMK
Sbjct:   69 NPGQQVVKIVNEELTATLGGETIKITFSSKPPTVVLMAGLQGSGKTTNSAKLASWFKRQGRHPLLVGADLQRPAAVEQLRTLGRQIEVPVWSEDTDPVAVASGAVAEARRTGRDVVIVDTAGRLAIDADLMDEVRRISGAVSPDYTFLVIDAMTGQDAVATAEAFHATLELDGVILTKLDGDARGGAALSVKEVVGRPIAFASTGEKIKDFDLFHPDRLAGRILGMGDMLTLIEKAEEVFEQDQAEEAATKLLEGQFTFDDFLDQMQQLKKMGPLSGLLGMMPGVPKEVRNAEIDDREIARIEAIIRSMTTTERVDPDLIDASRRERIARGSGTDPHQVSELVKQFKEVSKMMK 422
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BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Match: A0A7C1UEZ4_9ACTN (Signal recognition particle protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UEZ4_9ACTN)

HSP 1 Score: 508 bits (1309), Expect = 4.680e-177
Identity = 253/352 (71.88%), Postives = 303/352 (86.08%), Query Frame = 1 
Query:    4 PGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTGKLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEVARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVVDAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIAFQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAARLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIARIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMRKMM 1059
            PGQQ++KIV EELT  LGGE ++ITYA+KPPTVVLMAGLQG+GKTT++ KLA+WFK QGR+PLLVGADLQRPAAVEQLRTL +++ VPVFSEP+DPV VAR+A++EA RTGRDV+I DTAGRLAID+ LM ++ +IS  ++PD+TFLV+DAMTGQDAV  A AF+ETL LDGVILTK+DGDARGGAALSVKE+VG+PIAF STGE +EDF+ FHPDR+A RILGMGDV TLIEKAE  FE EQAEEAA RLMEG FT +DFLEQ+  VKKMG +G+L+ MMPG+PKE ++ EIDDRQ+AR+E I+HSMT  ER +P++IDGSRR RIA GSG  P++V ALL QF  M+KMM
Sbjct:   70 PGQQVIKIVDEELTAILGGETLRITYAAKPPTVVLMAGLQGSGKTTSSAKLARWFKSQGRHPLLVGADLQRPAAVEQLRTLGSRIDVPVFSEPSDPVTVARQALEEARRTGRDVLICDTAGRLAIDQELMEEISQISETIEPDFTFLVIDAMTGQDAVNTAEAFHETLELDGVILTKLDGDARGGAALSVKEVVGRPIAFASTGENIEDFDQFHPDRMADRILGMGDVLTLIEKAEAVFEEEQAEEAARRLMEGKFTFDDFLEQLAAVKKMGNMGSLLKMMPGIPKELKNAEIDDRQMARVEAIVHSMTTEERAHPEIIDGSRRARIARGSGTSPSQVTALLKQFKDMQKMM 421
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74710.17674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8GGE0_9ACTN8.070e-21788.20Signal recognition particle protein n=5 Tax=Acidim... [more]
A0A6B1B121_9ACTN1.040e-20683.43Signal recognition particle protein n=1 Tax=Acidim... [more]
A0A7Y1U3W5_9ACTN6.490e-18675.56Signal recognition particle protein n=3 Tax=Acidim... [more]
A0A6G0A6U5_9ACTN1.100e-18475.00Signal recognition particle protein n=2 Tax=Bacter... [more]
A0A5Q2RDB3_9ACTN4.320e-18475.71Signal recognition particle protein n=1 Tax=Actino... [more]
UPI001AA086394.810e-18375.42signal recognition particle protein n=1 Tax=Rhabdo... [more]
A0A6I3C5D2_9ACTN1.700e-18275.49Signal recognition particle protein n=2 Tax=root T... [more]
A0A6I3I3J0_9ACTN6.280e-17873.45Signal recognition particle protein n=17 Tax=root ... [more]
UPI001E374ABC1.610e-17773.73signal recognition particle protein n=1 Tax=Rhabdo... [more]
A0A7C1UEZ4_9ACTN4.680e-17771.88Signal recognition particle protein n=1 Tax=Acidim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74710contigM-pyrifera_M_contig74710:2..1069 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score508.4
Seed ortholog evalue2.6e-141
Seed eggNOG ortholog1229780.BN381_330034
Preferred nameffh
KEGG koko:K03106
KEGG TC3.A.5.1,3.A.5.2,3.A.5.7,3.A.5.8,3.A.5.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0030312,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0040007,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904
EggNOG free text desc.Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EggNOG OGs2GK4R@201174,3UWFG@52018,COG0541@1,COG0541@2
EC3.6.5.4
COG Functional cat.U
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02044
Exons1
Model size1068
Cds size1068
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816645.6887033-CDS-M-pyrifera_M_contig74710:1..10691622816645.6887033-CDS-M-pyrifera_M_contig74710:1..1069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74710 2..1069 +
1692278096.2417235-CDS-M-pyrifera_M_contig74710:1..10691692278096.2417235-CDS-M-pyrifera_M_contig74710:1..1069Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74710 2..1069 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74710.17674.1prot_M-pyrifera_M_contig74710.17674.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74710 2..1069 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74710.17674.1

>prot_M-pyrifera_M_contig74710.17674.1 ID=prot_M-pyrifera_M_contig74710.17674.1|Name=mRNA_M-pyrifera_M_contig74710.17674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=356bp
NPGQQIVKIVLEELTESLGGEAMKITYASKPPTVVLMAGLQGAGKTTNTG
KLAQWFKKQGRNPLLVGADLQRPAAVEQLRTLAAQVGVPVFSEPTDPVEV
ARKAIDEANRTGRDVVIVDTAGRLAIDEALMAQVGEISAAVDPDYTFLVV
DAMTGQDAVTVAHAFNETLALDGVILTKIDGDARGGAALSVKEIVGKPIA
FQSTGEKLEDFETFHPDRLASRILGMGDVETLIEKAEEAFETEQAEEAAA
RLMEGTFTLEDFLEQMQQVKKMGPLGNLMGMMPGLPKEARDVEIDDRQIA
RIEGIIHSMTPVERTNPDVIDGSRRQRIAIGSGVQPNEVKALLDQFGQMR
KMMKQF
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mRNA from alignment at M-pyrifera_M_contig74710:2..1069+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74710.17674.1 ID=mRNA_M-pyrifera_M_contig74710.17674.1|Name=mRNA_M-pyrifera_M_contig74710.17674.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig74710:2..1069+ (Macrocystis pyrifera P11B4 male)
AACCCCGGGCAACAGATCGTCAAGATCGTTCTCGAGGAGCTGACCGAGAG
CCTCGGCGGCGAGGCGATGAAGATCACCTACGCCTCGAAGCCGCCCACCG
TGGTGCTGATGGCGGGCCTCCAGGGCGCGGGCAAGACCACCAACACCGGC
AAGCTCGCCCAGTGGTTCAAGAAGCAGGGCCGCAACCCACTGTTGGTCGG
CGCCGACCTCCAGCGCCCGGCCGCCGTCGAGCAGCTCCGTACCCTGGCCG
CCCAGGTCGGTGTGCCGGTCTTCTCCGAGCCCACCGACCCCGTCGAGGTG
GCCCGCAAGGCGATCGACGAAGCCAACCGCACCGGTCGCGACGTGGTGAT
CGTCGACACCGCCGGTCGTCTGGCCATCGACGAAGCGCTCATGGCGCAGG
TCGGCGAGATCTCCGCCGCGGTCGATCCCGACTACACGTTCCTCGTGGTC
GACGCGATGACCGGCCAGGACGCCGTCACCGTTGCCCATGCCTTCAACGA
GACGCTCGCACTCGATGGGGTGATCCTCACCAAGATCGACGGCGACGCCC
GCGGTGGTGCTGCGCTCTCGGTGAAGGAGATCGTCGGCAAGCCGATCGCC
TTCCAGTCGACGGGCGAGAAGCTCGAAGACTTCGAGACCTTCCATCCCGA
CCGCCTGGCCAGTCGCATCCTCGGCATGGGCGACGTCGAGACGCTCATCG
AGAAGGCCGAGGAAGCCTTCGAGACCGAGCAGGCCGAAGAGGCCGCAGCC
CGCCTCATGGAGGGCACCTTCACGCTCGAGGACTTCCTCGAACAGATGCA
GCAGGTCAAGAAGATGGGCCCGCTCGGCAACCTGATGGGGATGATGCCGG
GGCTGCCCAAGGAGGCCCGCGACGTCGAGATCGACGACCGCCAGATCGCC
CGGATCGAAGGCATCATCCACTCGATGACGCCGGTCGAGCGGACGAATCC
CGACGTCATCGACGGCTCGCGCCGACAGCGCATCGCGATCGGTTCGGGGG
TGCAGCCCAACGAGGTCAAGGCCCTGCTCGACCAGTTCGGGCAGATGCGC
AAGATGATGAAGCAGTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74710:2..1069+

>mRNA_M-pyrifera_M_contig74710.17674.1 ID=mRNA_M-pyrifera_M_contig74710.17674.1|Name=mRNA_M-pyrifera_M_contig74710.17674.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2136bp|location=Sequence derived from alignment at M-pyrifera_M_contig74710:2..1069+ (Macrocystis pyrifera P11B4 male)
AACCCCGGGCAACAGATCGTCAAGATCGTTCTCGAGGAGCTGACCGAGAG
CCTCGGCGGCGAGGCGATGAAGATCACCTACGCCTCGAAGCCGCCCACCG
TGGTGCTGATGGCGGGCCTCCAGGGCGCGGGCAAGACCACCAACACCGGC
AAGCTCGCCCAGTGGTTCAAGAAGCAGGGCCGCAACCCACTGTTGGTCGG
CGCCGACCTCCAGCGCCCGGCCGCCGTCGAGCAGCTCCGTACCCTGGCCG
CCCAGGTCGGTGTGCCGGTCTTCTCCGAGCCCACCGACCCCGTCGAGGTG
GCCCGCAAGGCGATCGACGAAGCCAACCGCACCGGTCGCGACGTGGTGAT
CGTCGACACCGCCGGTCGTCTGGCCATCGACGAAGCGCTCATGGCGCAGG
TCGGCGAGATCTCCGCCGCGGTCGATCCCGACTACACGTTCCTCGTGGTC
GACGCGATGACCGGCCAGGACGCCGTCACCGTTGCCCATGCCTTCAACGA
GACGCTCGCACTCGATGGGGTGATCCTCACCAAGATCGACGGCGACGCCC
GCGGTGGTGCTGCGCTCTCGGTGAAGGAGATCGTCGGCAAGCCGATCGCC
TTCCAGTCGACGGGCGAGAAGCTCGAAGACTTCGAGACCTTCCATCCCGA
CCGCCTGGCCAGTCGCATCCTCGGCATGGGCGACGTCGAGACGCTCATCG
AGAAGGCCGAGGAAGCCTTCGAGACCGAGCAGGCCGAAGAGGCCGCAGCC
CGCCTCATGGAGGGCACCTTCACGCTCGAGGACTTCCTCGAACAGATGCA
GCAGGTCAAGAAGATGGGCCCGCTCGGCAACCTGATGGGGATGATGCCGG
GGCTGCCCAAGGAGGCCCGCGACGTCGAGATCGACGACCGCCAGATCGCC
CGGATCGAAGGCATCATCCACTCGATGACGCCGGTCGAGCGGACGAATCC
CGACGTCATCGACGGCTCGCGCCGACAGCGCATCGCGATCGGTTCGGGGG
TGCAGCCCAACGAGGTCAAGGCCCTGCTCGACCAGTTCGGGCAGATGCGC
AAGATGATGAAGCAGTTCAACCCCGGGCAACAGATCGTCAAGATCGTTCT
CGAGGAGCTGACCGAGAGCCTCGGCGGCGAGGCGATGAAGATCACCTACG
CCTCGAAGCCGCCCACCGTGGTGCTGATGGCGGGCCTCCAGGGCGCGGGC
AAGACCACCAACACCGGCAAGCTCGCCCAGTGGTTCAAGAAGCAGGGCCG
CAACCCACTGTTGGTCGGCGCCGACCTCCAGCGCCCGGCCGCCGTCGAGC
AGCTCCGTACCCTGGCCGCCCAGGTCGGTGTGCCGGTCTTCTCCGAGCCC
ACCGACCCCGTCGAGGTGGCCCGCAAGGCGATCGACGAAGCCAACCGCAC
CGGTCGCGACGTGGTGATCGTCGACACCGCCGGTCGTCTGGCCATCGACG
AAGCGCTCATGGCGCAGGTCGGCGAGATCTCCGCCGCGGTCGATCCCGAC
TACACGTTCCTCGTGGTCGACGCGATGACCGGCCAGGACGCCGTCACCGT
TGCCCATGCCTTCAACGAGACGCTCGCACTCGATGGGGTGATCCTCACCA
AGATCGACGGCGACGCCCGCGGTGGTGCTGCGCTCTCGGTGAAGGAGATC
GTCGGCAAGCCGATCGCCTTCCAGTCGACGGGCGAGAAGCTCGAAGACTT
CGAGACCTTCCATCCCGACCGCCTGGCCAGTCGCATCCTCGGCATGGGCG
ACGTCGAGACGCTCATCGAGAAGGCCGAGGAAGCCTTCGAGACCGAGCAG
GCCGAAGAGGCCGCAGCCCGCCTCATGGAGGGCACCTTCACGCTCGAGGA
CTTCCTCGAACAGATGCAGCAGGTCAAGAAGATGGGCCCGCTCGGCAACC
TGATGGGGATGATGCCGGGGCTGCCCAAGGAGGCCCGCGACGTCGAGATC
GACGACCGCCAGATCGCCCGGATCGAAGGCATCATCCACTCGATGACGCC
GGTCGAGCGGACGAATCCCGACGTCATCGACGGCTCGCGCCGACAGCGCA
TCGCGATCGGTTCGGGGGTGCAGCCCAACGAGGTCAAGGCCCTGCTCGAC
CAGTTCGGGCAGATGCGCAAGATGATGAAGCAGTTC
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