mRNA_M-pyrifera_M_contig74652.17660.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74652.17660.1
Unique NamemRNA_M-pyrifera_M_contig74652.17660.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A482RMM2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RMM2_9ARCH)

HSP 1 Score: 303 bits (775), Expect = 1.830e-98
Identity = 138/241 (57.26%), Postives = 178/241 (73.86%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGSKPSSFWIKRGTALLLSLAT 723
            +FQE++RYN+L+  MR +L +LQ+GIQG VVITPELE +F+ALL GRVP AW FCYPSLKPLG W RDL+ R+ Q++ W     P V WL G TYPT + TALLQT +R  G+ I+ L F Y+++ + + ++   P +GAY+ GLFLEGA W+ DG+ L EPEPMQL   MPVIHF PRE++K   +    +Y+CP+YLYP+RTGTRERPSFM  VDL SG+     W++RGTALLL+LAT
Sbjct:  200 VFQEVERYNALLDVMRRTLVALQKGIQGTVVITPELEQIFSALLLGRVPAAWAFCYPSLKPLGLWFRDLQARIQQLRKWVTHEMPKVFWLSGFTYPTGFLTALLQTSARKNGLPIDTLEFEYVVMPDGSPELREHPKEGAYVSGLFLEGAKWDADGSCLSEPEPMQLFAPMPVIHFKPREIQKSVTR---GIYKCPMYLYPVRTGTRERPSFMQMVDLRSGTHEPEVWVRRGTALLLALAT 437
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A662YJI7_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YJI7_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.140e-93
Identity = 137/242 (56.61%), Postives = 174/242 (71.90%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGS-KPSSFWIKRGTALLLSLAT 723
            L QE++RYN L+  + +S+++L++GIQG VVITPELEAV+ ALL G VP AWGFCYPSLKPLGPW +DL+ R  Q+  WA    P V WL G TYPT + TALLQT +R  G+AI+ L + +++L +    + +GP DGAY++GL LEGA W+ D   L EP PM+L C+MP++HF P E +K   K    LY CPLY+YP+RTGTRERPSFM  VDL +GS K    W KRGTALLLSL+T
Sbjct:  194 LLQELERYNKLLATINSSVRALEKGIQGSVVITPELEAVYNALLLGAVPTAWGFCYPSLKPLGPWTQDLKLRCEQMTRWALHAQPAVFWLAGFTYPTGFLTALLQTAARKNGLAIDSLNWEFLVLSQPENALPSGPKDGAYVKGLILEGARWDFDHDCLAEPLPMELHCSMPILHFRPVEAKKKAAK---GLYSCPLYMYPLRTGTRERPSFMIAVDLKAGSGKTPDLWTKRGTALLLSLST 432
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A7S1CJP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CJP2_9STRA)

HSP 1 Score: 298 bits (764), Expect = 2.350e-93
Identity = 140/236 (59.32%), Postives = 174/236 (73.73%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGSKPSSFWIKRGTALL 708
            LFQEI+RYN L+R +  SL+ LQRGI+GLVVITPELE VF ALL G+VPE W FCYPSLKPLG WMRDL +R+ Q++SW +   P V WL G TYPT + TALLQT +R  GVAI+ L++ + +L++    IT  P +GAY+RG+FLEGA W+ID   L EP PM+L C MP++HF P E +K   K    +Y CPLY+YP+RTGTRERPSFM  VD+ SG+   +FW KRGTALL
Sbjct:  513 LFQEIERYNRLLRLLARSLRDLQRGIKGLVVITPELEEVFDALLVGKVPEGWAFCYPSLKPLGTWMRDLVERVLQMRSWVEEAMPKVFWLSGFTYPTGFLTALLQTSARKNGVAIDTLSWDFPVLQQDEGAITAYPKEGAYVRGMFLEGARWDIDHGCLVEPRPMELFCPMPLVHFKPVENKKKSSK---GMYTCPLYMYPVRTGTRERPSFMIAVDVKSGAVDGTFWTKRGTALL 745
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A813A0F5_9DINO (DHC10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A0F5_9DINO)

HSP 1 Score: 295 bits (755), Expect = 2.460e-92
Identity = 137/242 (56.61%), Postives = 179/242 (73.97%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILE--EAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGSKPSSFWIKRGTALLLSLA 720
            LFQE+DRYN L++ MR++L  LQRGIQGLVVITPELE +FA+LL G VP+AW FCYPSLKPLG WMRDL+ R+ Q++ W +V  P V WL G TYPT + TALLQT +R  G+AI+ L++ + +++  +    IT  P++GAY+ GL LEGA W+ +   L EP PM+L   +P++HF P E +K  +    S+Y CPLYLYPIRTGTRERPS+M  ++L SG KP +FW+KRGTA LL+LA
Sbjct:  474 LFQEVDRYNKLLKKMRSTLIDLQRGIQGLVVITPELEGIFASLLNGSVPKAWSFCYPSLKPLGSWMRDLQLRVQQMQQWVEVELPKVFWLSGFTYPTGFLTALLQTSARKNGIAIDSLSWEFPVMDASQGPSSITKHPEEGAYVHGLILEGARWDAENKCLTEPMPMELFSPLPMVHFKPVERKKQTK----SMYTCPLYLYPIRTGTRERPSYMIALELRSGEKPPTFWVKRGTAALLALA 711
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A1V9YWN4_9STRA (Dynein heavy chain n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YWN4_9STRA)

HSP 1 Score: 285 bits (730), Expect = 2.340e-89
Identity = 134/242 (55.37%), Postives = 173/242 (71.49%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGS-KPSSFWIKRGTALLLSLAT 723
            L QE++RYN L+  +++SL +L++GIQGLVVITPELEA++ A+L G VP+AW FCYPSLKPLG W  +L  R+ Q++ WA+   P V WL G TYPT + TALLQT +R  GV+I+ L + ++I+ +  + I  GP DGAY++GLFLEGA W+ +   L EP PM+L C MP+IHF P E +K   K     Y CPLY+YPIRTGTRERPSFM  VDL  G+ K    W KRGTALLLSL++
Sbjct:  400 LVQELERYNKLLSTIKSSLVALEKGIQGLVVITPELEAIYQAMLIGAVPKAWSFCYPSLKPLGSWTMELEQRVDQMRHWANNSMPVVFWLSGFTYPTGFLTALLQTAARKNGVSIDSLNWEFLIINQHEDSIVVGPKDGAYVKGLFLEGARWDFEHDCLTEPNPMELYCNMPMIHFRPVENKKKAAK---GTYSCPLYMYPIRTGTRERPSFMIAVDLKCGAQKVPDVWTKRGTALLLSLSS 638
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A5A8DIL6_CAFRO (Uncharacterized protein n=12 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DIL6_CAFRO)

HSP 1 Score: 298 bits (763), Expect = 2.670e-89
Identity = 143/246 (58.13%), Postives = 176/246 (71.54%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHP------REMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGSKPSSFWIKRGTALLLSLA 720
            LFQE DRY  L+  MR+SL +LQ+GIQGLVVIT +LE +F ALL GRVP+AW FCYPSLKPLG WM DL +R  Q++ W +   PP  WLGG TYPTS  TA+LQ K+R   VAIN+LT+++ I++  A  I   P+DG ++RGLFLEGA W+ D A L EP+ M L   MPV+HF P       + R GG  D  ++Y CP+YLYP+RTGTRERPSFM  V+LN+G   S FWIKRGTALLL+LA
Sbjct: 4504 LFQETDRYAQLLTRMRSSLVALQKGIQGLVVITADLEQMFDALLKGRVPDAWAFCYPSLKPLGSWMGDLVERCSQMRGWVEDAMPPTMWLGGFTYPTSLLTAVLQVKARKDTVAINKLTYTFPIVDRPANGIKAAPEDGVFVRGLFLEGARWDFDEAKLVEPQAMSLYETMPVVHFLPVIPRAEGKKRAGGVADSAAMYSCPMYLYPVRTGTRERPSFMRMVELNAGDFTSDFWIKRGTALLLALA 4749
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A418G038_9STRA (Protein kinase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418G038_9STRA)

HSP 1 Score: 286 bits (732), Expect = 5.320e-88
Identity = 134/242 (55.37%), Postives = 174/242 (71.90%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSGS-KPSSFWIKRGTALLLSLAT 723
            L QE++RYN L+ A+++ L +L++G+QG+VVITPELEAV+ A+L G VP+AWGFCYPSLKPLG W ++L  R+ Q++ WA+   P V WL G TYPT + TALLQT +R  GV+I+ L + ++I+ +  + I  GP DGAY++GLFLEGA W+ +   L EP PM L C MP+IHF P E +K   K     Y CPLY+YPIRTGTRERPSFM  VDL  G+ K    W KRGTA+LLSL+T
Sbjct:  581 LLQELERYNKLLGAIKSQLVALEKGMQGMVVITPELEAVYNAMLIGAVPKAWGFCYPSLKPLGSWTQELELRIYQMRHWANTAQPVVFWLSGFTYPTGFLTALLQTAARKNGVSIDSLNWEFLIINQHEDSIVVGPKDGAYVKGLFLEGARWDFEHDCLAEPNPMDLYCNMPMIHFKPVETKKKASK---GTYSCPLYMYPIRTGTRERPSFMIAVDLRCGAGKSPDLWTKRGTAMLLSLST 819
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BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A2P4XL02_9STRA (Dynein heavy chain n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XL02_9STRA)

HSP 1 Score: 290 bits (742), Expect = 6.390e-87
Identity = 138/242 (57.02%), Postives = 171/242 (70.66%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSG-SKPSSFWIKRGTALLLSLAT 723
            L QE++RYN L+  + AS ++L++GIQG VVITPELEAV+ ALL G VP+AW FCYPSLKPLGPW +DL+ R  Q+  WA+   P V WL G TYPT + TALLQT +R  G+AI+ L + +I+L +    + TGP DGAYI+GL LEGA W+ D   L EP PM+L C MP++HF P E +K   K    LY CPLY+YP+RTGTRERPSFM  VDL  G  K    W +RGTALLLSL+T
Sbjct: 1074 LMQELERYNKLLATINASARALEKGIQGSVVITPELEAVYNALLIGAVPKAWSFCYPSLKPLGPWTQDLKLRCEQMDRWANQAQPAVFWLTGFTYPTGFLTALLQTAARKNGLAIDSLNWEFIVLNQGENALPTGPKDGAYIKGLILEGARWDFDHDCLAEPHPMELHCGMPILHFRPVEAKKKSAK---GLYSCPLYMYPLRTGTRERPSFMIAVDLKVGPGKTPDLWTRRGTALLLSLST 1312
[Close]
BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A6A3MEF3_9STRA (Dynein-1-beta heavy chain, flagellar inner arm I1 complex n=25 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MEF3_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.300e-86
Identity = 138/242 (57.02%), Postives = 172/242 (71.07%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSG-SKPSSFWIKRGTALLLSLAT 723
            L QE++RYN L+  + +S ++L+RGIQG VVITPELEAV+ ALL G VP+AW FCYPSLKPLGPW +DL+ R  Q+  WA+   PPV WL G TYPT + TALLQT +R  G+AI+ L + +I+L +    + TGP DGAYI+G+ LEGA W+ D   L EP PM+L C MP++HF P E +K   K    LY CPLY+YP+RTGTRERPSFM  VDL  G  K    W +RGTALLLSL+T
Sbjct: 4321 LMQELERYNKLLATINSSARALERGIQGSVVITPELEAVYNALLIGAVPQAWSFCYPSLKPLGPWTQDLKLRCEQMDRWANQLLPPVFWLTGFTYPTGFLTALLQTAARKNGLAIDSLNWEFIVLNQGENALPTGPKDGAYIKGIILEGARWDFDHDCLAEPNPMELHCGMPILHFRPVEAKKKSAK---GLYSCPLYMYPLRTGTRERPSFMIAVDLKVGPGKTPDLWTRRGTALLLSLST 4559
[Close]
BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Match: A0A0P1ASI6_PLAHL (Flagellar inner arm dynein 1 heavy chain beta n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASI6_PLAHL)

HSP 1 Score: 288 bits (738), Expect = 6.080e-86
Identity = 138/242 (57.02%), Postives = 172/242 (71.07%), Query Frame = 1 
Query:    1 LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPEAWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYFTALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGAGWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLYPIRTGTRERPSFMSYVDLNSG-SKPSSFWIKRGTALLLSLAT 723
            L QE+DRYN L+  +  S  +L++GIQG VVITPELEAV+ ALL G +P+AW FCYPSLKPLGPW +DL+ R  Q+  WA+   P V WL G+TYPT + TALLQT +R  G+AI+ L + +IIL ++   + TGP DGAYI+GL LEGA W+ D   L EP PMQL C MP++HF P E +K   K    +Y CPLY+YP+RTGTRERPSF+  VDL  G  K   FW +RGTALLLSL+T
Sbjct: 4310 LVQELDRYNKLLYVINMSACALEKGIQGSVVITPELEAVYNALLNGTLPQAWSFCYPSLKPLGPWTQDLKLRCEQMDRWANQAQPTVFWLAGLTYPTGFLTALLQTAARKNGLAIDSLNWEFIILNQSENVLNTGPKDGAYIKGLILEGARWDFDHDCLTEPHPMQLHCEMPILHFRPVEAKKKFAK---GMYTCPLYMYPLRTGTRERPSFIIAVDLKVGPGKTPEFWTRRGTALLLSLST 4548
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74652.17660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482RMM2_9ARCH1.830e-9857.26Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A662YJI7_9STRA2.140e-9356.61Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
A0A7S1CJP2_9STRA2.350e-9359.32Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A813A0F5_9DINO2.460e-9256.61DHC10 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1V9YWN4_9STRA2.340e-8955.37Dynein heavy chain n=1 Tax=Thraustotheca clavata T... [more]
A0A5A8DIL6_CAFRO2.670e-8958.13Uncharacterized protein n=12 Tax=Cafeteria roenber... [more]
A0A418G038_9STRA5.320e-8855.37Protein kinase domain-containing protein n=2 Tax=A... [more]
A0A2P4XL02_9STRA6.390e-8757.02Dynein heavy chain n=1 Tax=Phytophthora palmivora ... [more]
A0A6A3MEF3_9STRA1.300e-8657.02Dynein-1-beta heavy chain, flagellar inner arm I1 ... [more]
A0A0P1ASI6_PLAHL6.080e-8657.02Flagellar inner arm dynein 1 heavy chain beta n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74652contigM-pyrifera_M_contig74652:175..900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score299.7
Seed ortholog evalue1.3e-78
Seed eggNOG ortholog42099.EPrPV00000014564
Preferred nameDNAH2
KEGG koko:K10408
KEGG Pathwayko05016,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003341,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005858,GO:0005875,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008017,GO:0008092,GO:0008150,GO:0008569,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0030030,GO:0030031,GO:0030286,GO:0031514,GO:0032838,GO:0032991,GO:0034622,GO:0035082,GO:0036156,GO:0036159,GO:0040011,GO:0042623,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045503,GO:0045505,GO:0048870,GO:0051179,GO:0051674,GO:0051959,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902494,GO:1990939
EggNOG free text desc.dynein heavy chain. Source PGD
EggNOG OGs1MCSX@121069,COG5245@1,KOG3595@2759
COG Functional cat.Z
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Exons1
Model size726
Cds size726
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816644.9551027-CDS-M-pyrifera_M_contig74652:174..9001622816644.9551027-CDS-M-pyrifera_M_contig74652:174..900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74652 175..900 -
1692278095.8471065-CDS-M-pyrifera_M_contig74652:174..9001692278095.8471065-CDS-M-pyrifera_M_contig74652:174..900Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74652 175..900 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74652.17660.1prot_M-pyrifera_M_contig74652.17660.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74652 175..900 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74652.17660.1

>prot_M-pyrifera_M_contig74652.17660.1 ID=prot_M-pyrifera_M_contig74652.17660.1|Name=mRNA_M-pyrifera_M_contig74652.17660.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
LFQEIDRYNSLVRAMRASLKSLQRGIQGLVVITPELEAVFAALLTGRVPE
AWGFCYPSLKPLGPWMRDLRDRMGQIKSWADVGPPPVCWLGGITYPTSYF
TALLQTKSRAAGVAINELTFSYIILEEAAEDITTGPDDGAYIRGLFLEGA
GWNIDGAHLDEPEPMQLTCAMPVIHFHPREMRKGGRKDRDSLYECPLYLY
PIRTGTRERPSFMSYVDLNSGSKPSSFWIKRGTALLLSLAT*
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mRNA from alignment at M-pyrifera_M_contig74652:175..900-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74652.17660.1 ID=mRNA_M-pyrifera_M_contig74652.17660.1|Name=mRNA_M-pyrifera_M_contig74652.17660.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig74652:175..900- (Macrocystis pyrifera P11B4 male)
CTTTTCCAAGAGATTGATCGCTACAATTCCTTGGTACGTGCAATGCGTGC
ATCACTCAAGTCTTTGCAACGTGGAATCCAAGGGTTAGTTGTGATCACTC
CAGAGTTAGAAGCAGTATTTGCTGCTTTGCTCACAGGACGTGTTCCTGAA
GCATGGGGATTCTGTTATCCATCCTTGAAGCCACTTGGTCCATGGATGCG
TGATCTTCGTGATCGCATGGGCCAAATCAAGAGTTGGGCAGATGTTGGAC
CACCTCCAGTATGTTGGCTTGGTGGAATCACGTACCCTACGTCTTATTTC
ACAGCACTACTGCAAACAAAGTCACGTGCAGCTGGTGTAGCCATCAATGA
GCTTACCTTTTCCTACATCATCCTTGAAGAAGCAGCTGAAGACATTACAA
CAGGTCCTGATGATGGTGCTTACATCCGTGGTCTCTTCCTTGAAGGTGCT
GGTTGGAACATTGATGGCGCTCATCTTGATGAGCCTGAACCAATGCAGCT
CACTTGTGCTATGCCTGTGATTCATTTCCACCCTCGTGAAATGCGTAAAG
GTGGTCGCAAGGATCGTGACAGTCTCTATGAATGCCCACTTTATCTCTAC
CCCATCCGCACTGGAACCCGAGAACGCCCATCCTTCATGAGCTACGTTGA
TCTCAACTCTGGCTCCAAGCCATCCAGTTTCTGGATCAAACGAGGAACAG
CCCTCCTCCTCAGCCTCGCCACGTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74652:175..900-

>mRNA_M-pyrifera_M_contig74652.17660.1 ID=mRNA_M-pyrifera_M_contig74652.17660.1|Name=mRNA_M-pyrifera_M_contig74652.17660.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig74652:175..900- (Macrocystis pyrifera P11B4 male)
CTTTTCCAAGAGATTGATCGCTACAATTCCTTGGTACGTGCAATGCGTGC
ATCACTCAAGTCTTTGCAACGTGGAATCCAAGGGTTAGTTGTGATCACTC
CAGAGTTAGAAGCAGTATTTGCTGCTTTGCTCACAGGACGTGTTCCTGAA
GCATGGGGATTCTGTTATCCATCCTTGAAGCCACTTGGTCCATGGATGCG
TGATCTTCGTGATCGCATGGGCCAAATCAAGAGTTGGGCAGATGTTGGAC
CACCTCCAGTATGTTGGCTTGGTGGAATCACGTACCCTACGTCTTATTTC
ACAGCACTACTGCAAACAAAGTCACGTGCAGCTGGTGTAGCCATCAATGA
GCTTACCTTTTCCTACATCATCCTTGAAGAAGCAGCTGAAGACATTACAA
CAGGTCCTGATGATGGTGCTTACATCCGTGGTCTCTTCCTTGAAGGTGCT
GGTTGGAACATTGATGGCGCTCATCTTGATGAGCCTGAACCAATGCAGCT
CACTTGTGCTATGCCTGTGATTCATTTCCACCCTCGTGAAATGCGTAAAG
GTGGTCGCAAGGATCGTGACAGTCTCTATGAATGCCCACTTTATCTCTAC
CCCATCCGCACTGGAACCCGAGAACGCCCATCCTTCATGAGCTACGTTGA
TCTCAACTCTGGCTCCAAGCCATCCAGTTTCTGGATCAAACGAGGAACAG
CCCTCCTCCTCAGCCTCGCCACGTAACTTTTCCAAGAGATTGATCGCTAC
AATTCCTTGGTACGTGCAATGCGTGCATCACTCAAGTCTTTGCAACGTGG
AATCCAAGGGTTAGTTGTGATCACTCCAGAGTTAGAAGCAGTATTTGCTG
CTTTGCTCACAGGACGTGTTCCTGAAGCATGGGGATTCTGTTATCCATCC
TTGAAGCCACTTGGTCCATGGATGCGTGATCTTCGTGATCGCATGGGCCA
AATCAAGAGTTGGGCAGATGTTGGACCACCTCCAGTATGTTGGCTTGGTG
GAATCACGTACCCTACGTCTTATTTCACAGCACTACTGCAAACAAAGTCA
CGTGCAGCTGGTGTAGCCATCAATGAGCTTACCTTTTCCTACATCATCCT
TGAAGAAGCAGCTGAAGACATTACAACAGGTCCTGATGATGGTGCTTACA
TCCGTGGTCTCTTCCTTGAAGGTGCTGGTTGGAACATTGATGGCGCTCAT
CTTGATGAGCCTGAACCAATGCAGCTCACTTGTGCTATGCCTGTGATTCA
TTTCCACCCTCGTGAAATGCGTAAAGGTGGTCGCAAGGATCGTGACAGTC
TCTATGAATGCCCACTTTATCTCTACCCCATCCGCACTGGAACCCGAGAA
CGCCCATCCTTCATGAGCTACGTTGATCTCAACTCTGGCTCCAAGCCATC
CAGTTTCTGGATCAAACGAGGAACAGCCCTCCTCCTCAGCCTCGCCACGT
AA
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