mRNA_M-pyrifera_M_contig74618.17657.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74618.17657.1
Unique NamemRNA_M-pyrifera_M_contig74618.17657.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A8J6LJW3_TENMO (Adaptin_N domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LJW3_TENMO)

HSP 1 Score: 326 bits (835), Expect = 4.700e-109
Identity = 164/244 (67.21%), Postives = 205/244 (84.02%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAA--GRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL++EL++   E+ K+AVKKVIA++TVGKD+SALFPDVVNCM+T++LE+KKLVYLYL+NYAKS PDMAIMAVN FVKD    NP++RALA+RTMG IRV++ITEYLC PL++ L DEDPYVRKTAA+CVAKL+DIS  L +DQGFLE L ++L+D  P VVANAVAALSEI+E++  G+P+ EL  A + KLL ALNEC+EWGQ FILD+L++Y P D REA+ I ER++PRLAH N AV
Sbjct:   13 GEIFELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISSGLVEDQGFLEQLKELLSDSNPMVVANAVAALSEINESSPTGQPLVELNHATINKLLTALNECTEWGQVFILDSLSNYNPKDEREAQSICERITPRLAHANAAV 256
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: W2TW59_NECAM (Adaptin region n=1 Tax=Necator americanus TaxID=51031 RepID=W2TW59_NECAM)

HSP 1 Score: 324 bits (830), Expect = 2.210e-108
Identity = 162/242 (66.94%), Postives = 203/242 (83.88%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAAGRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL+TEL+S   E+ ++AVKKVIA++TVGKD+SALFPDVVNCM+T+++E+KKLVYLYL+NYAKS PD+AIMAVN FVKD    NP++RALA+RTMG IRVE+ITEYLC PL++ + DEDPYVRKTAA+CVAKL D++P L ++QGF+E+L D+L+D  P VVANAVAAL+EI+E   RP+ E+ +  + KLL ALNEC+EWGQ FILDALASY P D REA+ I ER+SPRLAH N AV
Sbjct:   13 GEIFELKTELNSDKKEKKREAVKKVIASMTVGKDVSALFPDVVNCMQTDNVELKKLVYLYLMNYAKSQPDLAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVEKITEYLCEPLRKCMKDEDPYVRKTAAVCVAKLHDMNPKLVEEQGFVELLNDLLSDANPMVVANAVAALTEINEQ--RPLIEVNSQMVNKLLTALNECTEWGQVFILDALASYRPRDEREAQNICERISPRLAHANAAV 252
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A7S3MAA3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA3_9STRA)

HSP 1 Score: 322 bits (825), Expect = 4.190e-108
Identity = 162/242 (66.94%), Postives = 201/242 (83.06%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAAGRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE  ELR EL S   +R +DAVKKVIAN+T+GKD+S LF DV+NC++T++LE+KKLVYLYLINYAKS PD+A++AVN FVKD +  NP++RALAIRTMG IRV++ITEYLC PL R L DEDPYVRKTAA+CVAKL+DISP L +D+GF++ L D+++D  P VVANAV ALSEI+E +G+ +  +TA  LQKLLAALNEC+EWGQ FILD+L++YEP D+REAE I ERV+PRL H N AV
Sbjct:   22 GENHELREELRSPQRDRKRDAVKKVIANMTIGKDVSTLFTDVINCIQTDNLELKKLVYLYLINYAKSQPDLALLAVNTFVKDANDPNPLIRALAIRTMGCIRVDKITEYLCEPLSRCLKDEDPYVRKTAAVCVAKLYDISPELVEDRGFVDTLRDLISDANPTVVANAVCALSEIAENSGKDVMLVTANVLQKLLAALNECTEWGQVFILDSLSAYEPQDSREAEGIIERVTPRLQHNNSAV 263
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A0T6AVI9_9SCAR (Armadillo repeat containing protein (Fragment) n=3 Tax=Neoptera TaxID=33340 RepID=A0A0T6AVI9_9SCAR)

HSP 1 Score: 324 bits (830), Expect = 1.340e-107
Identity = 163/244 (66.80%), Postives = 203/244 (83.20%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAA--GRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL++EL++   E+ K+AVKKVIA++TVGKD+SALFPDVVNCM+T++LE+KKLVYLYL+NYAKS PDMAIMAVN FVKD    NP++RALA+RTMG IRV++ITEYLC PL++ L DEDPYVRKTAA+CVAKL+DIS  L +DQGFL+ L D+L+D  P VVANAVAALSEI+E++  G P+ EL    + KLL ALNEC+EWGQ FILD+L++Y P D REA+ I ER++PRLAH N AV
Sbjct:   16 GEIYELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISSGLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEINESSPTGSPLVELNTNTINKLLTALNECTEWGQVFILDSLSNYSPKDEREAQSICERITPRLAHANAAV 259
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A2P2JS29_RHIMU (Beta-adaptin-like protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2JS29_RHIMU)

HSP 1 Score: 322 bits (826), Expect = 3.800e-107
Identity = 166/242 (68.60%), Postives = 201/242 (83.06%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAAGRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL+ EL+S   ++ KDAVKKVIA +TVGKD+S LF DVVNCM+TE+LE+KKLVYLYLINYAKS PD+AI+AVN FVKD+   NP++RALA+RTMG IRV++ITEYLC PL+R L D+DPYVRKTAAICVAKL+DI+  LA+D+GFLE L D+L+D  P VVANAVAAL+EI + +  PIFE+T+  L KLL ALNEC+EWGQ FILDAL+ Y+ ADAREAE I ERV+PRL H N AV
Sbjct:   15 GEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSLLFADVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELAEDRGFLESLRDLLSDNNPMVVANAVAALAEIHDNSNGPIFEITSQTLSKLLTALNECTEWGQVFILDALSRYKAADAREAENIVERVTPRLQHANCAV 256
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A453I3U6_AEGTS (Adaptin_N domain-containing protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453I3U6_AEGTS)

HSP 1 Score: 321 bits (822), Expect = 6.360e-107
Identity = 162/242 (66.94%), Postives = 202/242 (83.47%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAAGRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL+ EL+S   ++ KDAVKKVIA +TVGKD+S+LF DVVNCM+TE+LE+KKLVYLYLINYAKS PD+AI+AVN FVKD+   NP++RALA+RTMG IRV++ITEYLC PL+R L D+DPYVRKTAAICVAKL+DI+  L +D+GFLE L D+++D  P VVANAVAAL+EI +++ RPIFE+T+  L KLL ALNEC+EWGQ FILD+L+ Y+  DAR+AE I ERV+PRL H N AV
Sbjct:   15 GEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQRCLKDDDPYVRKTAAICVAKLYDINAELVEDRGFLEALKDLISDNNPMVVANAVAALAEIQDSSARPIFEITSHTLTKLLTALNECTEWGQVFILDSLSRYKATDARDAENIVERVTPRLQHANCAV 256
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A7R9K5Q1_TIMGE (AP complex subunit beta n=3 Tax=Pterygota TaxID=7496 RepID=A0A7R9K5Q1_TIMGE)

HSP 1 Score: 325 bits (833), Expect = 2.100e-106
Identity = 163/244 (66.80%), Postives = 204/244 (83.61%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAA--GRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL++EL++   E+ ++AVKKVIA++TVGKD+SALFPDVVNCM+T++LE+KKLVYLYL+NYAKS PDMAIMAVN FVKD    NP++RALA+RTMG IRV++ITEYLC PL++ L DEDPYVRKTAA+CVAKL+DI+  L +DQGFL+ L D+L+D  P VVANAVAALSEI+EA+  G P+ E+ A  + KLL ALNEC+EWGQ FILD+LA+Y P D REA+ I ER++PRLAH N AV
Sbjct:   67 GEIFELKSELNNDKKEKKREAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEINEASTSGSPLIEMNAQTINKLLTALNECTEWGQVFILDSLANYTPKDDREAQSICERITPRLAHANAAV 310
[Close]
BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A418EVA5_9STRA (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EVA5_9STRA)

HSP 1 Score: 321 bits (822), Expect = 2.120e-106
Identity = 164/242 (67.77%), Postives = 199/242 (82.23%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAAGRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE  ELRTEL+  S ++ KDAVKKVIAN+TVGKD+S LF DVVNC++T D ++KKLVYLYLINYAKSNPD+ I+AVN FVKD +  NP++RAL++RTMG IRV+RITEYLC PL++ L DEDPYVRKTAAICVAKL+DI+P L  +QGFL+ML ++++D  P VVANAVAALSEI++  G   F+     LQKLLAALNEC+EWGQ F+LDALA+Y PAD+REAE I ERV+PRL H N AV
Sbjct:   42 GETHELRTELADQSRDKKKDAVKKVIANMTVGKDVSMLFTDVVNCIQTADTQLKKLVYLYLINYAKSNPDLTILAVNTFVKDANDPNPLIRALSVRTMGCIRVDRITEYLCEPLRKCLTDEDPYVRKTAAICVAKLYDINPELVDEQGFLDMLRELISDSNPTVVANAVAALSEIADNGGHQHFKSV---LQKLLAALNECNEWGQVFVLDALANYVPADSREAEGIIERVTPRLQHANSAV 280
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BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: UPI001F5FBB82 (LOW QUALITY PROTEIN: AP-1 complex subunit beta-1-like n=1 Tax=Schistocerca piceifrons TaxID=274613 RepID=UPI001F5FBB82)

HSP 1 Score: 319 bits (818), Expect = 2.490e-106
Identity = 160/244 (65.57%), Postives = 202/244 (82.79%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAA--GRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL++EL++   E+ ++AVKKVIA++TVGKD+SALFPDVVNCM+T++LE+KKLVYLYL+NYAKS PDMAIMAVN FVK     NP++RALA+RTMG  RV++ITEYLC PL++ L DEDPYVRKTAA+CVAKL+DI+  L +DQGFL+ L D+L+D  P VVANAVAALSEI+EA+  G P+ E+ A  + KLL AL+EC+EWGQ FILD+LA+Y P D REA+ I ER++PRLAH N AV
Sbjct:   13 GEIFELKSELNNDKKEKKREAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKGCEDPNPLIRALAVRTMGCTRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEINEASASGSPLIEMNAXTINKLLTALDECTEWGQVFILDSLANYSPTDDREAQSICERITPRLAHANTAV 256
[Close]
BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Match: A0A6J1MZL3_BICAN (AP complex subunit beta n=4 Tax=Obtectomera TaxID=104431 RepID=A0A6J1MZL3_BICAN)

HSP 1 Score: 334 bits (857), Expect = 1.470e-105
Identity = 167/244 (68.44%), Postives = 207/244 (84.84%), Query Frame = 1 
Query:    1 GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTEDLEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGAIRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFLEMLVDMLADGVPQVVANAVAALSEISEAA--GRPIFELTAARLQKLLAALNECSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV 726
            GE+ EL++EL+S   E+ K+AVKKVIA++TVGKD+SALFPDVVNCM+T++LE+KKLVYLYL+NYAKS PDMAIMAVN FVKD    NP++RALA+RTMG IRV++ITEYLC PL++ L DEDPYVRKTAA+CVAKL+DISP++ +DQGFL+ L D+L+D  P VVANAVAALSEI+EA+  GRP+ E+ A  + KLL ALNEC+EWGQ FILDAL++Y P D+REA  I ER++PRLAH N AV
Sbjct:   13 GEIFELKSELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISPSMVEDQGFLDQLKDLLSDSNPMVVANAVAALSEINEASVSGRPLVEMNAPTINKLLTALNECTEWGQVFILDALSNYAPRDSREAHSICERITPRLAHANAAV 256
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74618.17657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J6LJW3_TENMO4.700e-10967.21Adaptin_N domain-containing protein n=1 Tax=Tenebr... [more]
W2TW59_NECAM2.210e-10866.94Adaptin region n=1 Tax=Necator americanus TaxID=51... [more]
A0A7S3MAA3_9STRA4.190e-10866.94Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A0T6AVI9_9SCAR1.340e-10766.80Armadillo repeat containing protein (Fragment) n=3... [more]
A0A2P2JS29_RHIMU3.800e-10768.60Beta-adaptin-like protein n=1 Tax=Rhizophora mucro... [more]
A0A453I3U6_AEGTS6.360e-10766.94Adaptin_N domain-containing protein n=3 Tax=Mesang... [more]
A0A7R9K5Q1_TIMGE2.100e-10666.80AP complex subunit beta n=3 Tax=Pterygota TaxID=74... [more]
A0A418EVA5_9STRA2.120e-10667.77Adaptin_N domain-containing protein (Fragment) n=1... [more]
UPI001F5FBB822.490e-10665.57LOW QUALITY PROTEIN: AP-1 complex subunit beta-1-l... [more]
A0A6J1MZL3_BICAN1.470e-10568.44AP complex subunit beta n=4 Tax=Obtectomera TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74618contigM-pyrifera_M_contig74618:3..728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score335.1
Seed ortholog evalue2.7e-89
Seed eggNOG ortholog13037.EHJ79046
KEGG koko:K11825,ko:K12392
KEGG Pathwayko04142,ko04144,ko04721,ko04961,ko05016,map04142,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005886,GO:0005905,GO:0006810,GO:0007275,GO:0007423,GO:0008104,GO:0008150,GO:0008565,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030131,GO:0030132,GO:0030135,GO:0030136,GO:0030139,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045184,GO:0045334,GO:0048475,GO:0048513,GO:0048731,GO:0048749,GO:0048856,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098797,GO:0098805
EggNOG free text desc.Beta2-adaptin appendage, C-terminal sub-domain
EggNOG OGs38BHY@33154,3BD5B@33208,3CUTQ@33213,3SIRE@50557,41UX0@6656,4459F@7088,COG5096@1,KOG1061@2759
COG Functional cat.U
Best tax levelLepidoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons1
Model size726
Cds size726
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816644.8274732-CDS-M-pyrifera_M_contig74618:2..7281622816644.8274732-CDS-M-pyrifera_M_contig74618:2..728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74618 3..728 -
1692278095.7816432-CDS-M-pyrifera_M_contig74618:2..7281692278095.7816432-CDS-M-pyrifera_M_contig74618:2..728Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74618 3..728 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74618.17657.1prot_M-pyrifera_M_contig74618.17657.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74618 3..728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74618.17657.1

>prot_M-pyrifera_M_contig74618.17657.1 ID=prot_M-pyrifera_M_contig74618.17657.1|Name=mRNA_M-pyrifera_M_contig74618.17657.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=242bp
GEVGELRTELSSSSLERMKDAVKKVIANVTVGKDMSALFPDVVNCMRTED
LEIKKLVYLYLINYAKSNPDMAIMAVNAFVKDTSARNPMVRALAIRTMGA
IRVERITEYLCAPLKRALVDEDPYVRKTAAICVAKLFDISPTLAKDQGFL
EMLVDMLADGVPQVVANAVAALSEISEAAGRPIFELTAARLQKLLAALNE
CSEWGQSFILDALASYEPADAREAEVIAERVSPRLAHRNPAV
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mRNA from alignment at M-pyrifera_M_contig74618:3..728-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74618.17657.1 ID=mRNA_M-pyrifera_M_contig74618.17657.1|Name=mRNA_M-pyrifera_M_contig74618.17657.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig74618:3..728- (Macrocystis pyrifera P11B4 male)
GGAGAGGTCGGTGAGTTGCGCACAGAACTGTCCTCCAGCAGTCTGGAACG
GATGAAGGATGCTGTGAAGAAGGTAATTGCCAACGTCACGGTGGGCAAGG
ACATGAGTGCCTTGTTCCCAGACGTGGTAAATTGCATGCGGACGGAGGAT
TTAGAAATCAAGAAGCTGGTGTACCTCTATTTGATCAACTACGCCAAGAG
CAATCCAGACATGGCCATTATGGCTGTGAATGCTTTCGTCAAGGATACAA
GTGCCCGCAACCCAATGGTGCGTGCTTTGGCCATCCGCACAATGGGGGCT
ATTCGAGTGGAACGCATCACAGAATACCTCTGTGCGCCGTTGAAGCGTGC
TTTGGTGGATGAGGACCCGTATGTACGCAAAACAGCTGCGATTTGTGTGG
CAAAGCTGTTTGACATTTCTCCCACACTCGCAAAGGACCAAGGCTTCCTT
GAAATGCTCGTGGATATGCTTGCAGATGGAGTCCCTCAAGTGGTTGCCAA
CGCTGTGGCTGCTTTGAGTGAAATTAGTGAAGCAGCAGGGAGGCCAATCT
TTGAGCTCACTGCTGCCAGGTTGCAAAAACTCTTGGCTGCTCTCAATGAG
TGTTCCGAATGGGGCCAGAGCTTTATTCTCGATGCTCTTGCAAGCTACGA
GCCAGCAGACGCGAGAGAAGCAGAAGTGATCGCAGAACGTGTGTCTCCAC
GCCTCGCTCATCGCAACCCAGCTGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74618:3..728-

>mRNA_M-pyrifera_M_contig74618.17657.1 ID=mRNA_M-pyrifera_M_contig74618.17657.1|Name=mRNA_M-pyrifera_M_contig74618.17657.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1452bp|location=Sequence derived from alignment at M-pyrifera_M_contig74618:3..728- (Macrocystis pyrifera P11B4 male)
GGAGAGGTCGGTGAGTTGCGCACAGAACTGTCCTCCAGCAGTCTGGAACG
GATGAAGGATGCTGTGAAGAAGGTAATTGCCAACGTCACGGTGGGCAAGG
ACATGAGTGCCTTGTTCCCAGACGTGGTAAATTGCATGCGGACGGAGGAT
TTAGAAATCAAGAAGCTGGTGTACCTCTATTTGATCAACTACGCCAAGAG
CAATCCAGACATGGCCATTATGGCTGTGAATGCTTTCGTCAAGGATACAA
GTGCCCGCAACCCAATGGTGCGTGCTTTGGCCATCCGCACAATGGGGGCT
ATTCGAGTGGAACGCATCACAGAATACCTCTGTGCGCCGTTGAAGCGTGC
TTTGGTGGATGAGGACCCGTATGTACGCAAAACAGCTGCGATTTGTGTGG
CAAAGCTGTTTGACATTTCTCCCACACTCGCAAAGGACCAAGGCTTCCTT
GAAATGCTCGTGGATATGCTTGCAGATGGAGTCCCTCAAGTGGTTGCCAA
CGCTGTGGCTGCTTTGAGTGAAATTAGTGAAGCAGCAGGGAGGCCAATCT
TTGAGCTCACTGCTGCCAGGTTGCAAAAACTCTTGGCTGCTCTCAATGAG
TGTTCCGAATGGGGCCAGAGCTTTATTCTCGATGCTCTTGCAAGCTACGA
GCCAGCAGACGCGAGAGAAGCAGAAGTGATCGCAGAACGTGTGTCTCCAC
GCCTCGCTCATCGCAACCCAGCTGTGGGAGAGGTCGGTGAGTTGCGCACA
GAACTGTCCTCCAGCAGTCTGGAACGGATGAAGGATGCTGTGAAGAAGGT
AATTGCCAACGTCACGGTGGGCAAGGACATGAGTGCCTTGTTCCCAGACG
TGGTAAATTGCATGCGGACGGAGGATTTAGAAATCAAGAAGCTGGTGTAC
CTCTATTTGATCAACTACGCCAAGAGCAATCCAGACATGGCCATTATGGC
TGTGAATGCTTTCGTCAAGGATACAAGTGCCCGCAACCCAATGGTGCGTG
CTTTGGCCATCCGCACAATGGGGGCTATTCGAGTGGAACGCATCACAGAA
TACCTCTGTGCGCCGTTGAAGCGTGCTTTGGTGGATGAGGACCCGTATGT
ACGCAAAACAGCTGCGATTTGTGTGGCAAAGCTGTTTGACATTTCTCCCA
CACTCGCAAAGGACCAAGGCTTCCTTGAAATGCTCGTGGATATGCTTGCA
GATGGAGTCCCTCAAGTGGTTGCCAACGCTGTGGCTGCTTTGAGTGAAAT
TAGTGAAGCAGCAGGGAGGCCAATCTTTGAGCTCACTGCTGCCAGGTTGC
AAAAACTCTTGGCTGCTCTCAATGAGTGTTCCGAATGGGGCCAGAGCTTT
ATTCTCGATGCTCTTGCAAGCTACGAGCCAGCAGACGCGAGAGAAGCAGA
AGTGATCGCAGAACGTGTGTCTCCACGCCTCGCTCATCGCAACCCAGCTG
TG
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