mRNA_M-pyrifera_M_contig74602.17649.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74602.17649.1
Unique NamemRNA_M-pyrifera_M_contig74602.17649.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A812MJA4_SYMPI (MetC protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812MJA4_SYMPI)

HSP 1 Score: 167 bits (423), Expect = 5.800e-46
Identity = 101/248 (40.73%), Postives = 136/248 (54.84%), Query Frame = 1
Query:    4 VIVGNEMYGDLRGTVRYFADLMG--CTDDLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAIEELLQRTTLTVE--TSYG 735
            ++ G+E+Y D+  TV+Y A+  G   T   V++RD   L   F      I L   E+CTNPSGQI DF+++ K+L+  + + +   DNTWLS  LF P +HGAD+VLES TKYVS GRCIGG V G   L+  + S W+ ++G F+    CQ  L GL     RM          A +LEAH  V RV+YP L SHPT+    R L+     P  + FHV      K+A+  +L R     E  TS+G
Sbjct:   87 LVYGDELYCDVARTVQYVAEASGGKITTCPVEIRDTQRLRRLFTEKGAGIRLFHFEACTNPSGQIFDFTLL-KELRALAPQCVFVCDNTWLSGALFNPFEHGADIVLESMTKYVSAGRCIGGFVVGASSLIAPVLS-WITVFGVFVGADHCQIFLQGLQTISKRMATISATAEAIAVHLEAHPAVNRVMYPTLASHPTHGLAQRYLTRG--GPGCIWFHV---GAAKKAVVSVLTRGAACPEFKTSFG 327          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A812TU80_9DINO (Cth protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812TU80_9DINO)

HSP 1 Score: 167 bits (422), Expect = 1.130e-45
Identity = 95/230 (41.30%), Postives = 128/230 (55.65%), Query Frame = 1
Query:    4 VIVGNEMYGDLRGTVRYFADLMG--CTDDLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAI 687
            ++ G+E+Y ++  TVRY A+      +   VD+RD S +   F      I L   E+CTNPSGQ+MDF+ + K+L+  +   I   DNTWLS  LF P +HGAD+VLES TKYVS GRCIGG VAG   L+  + S W++ +G FI    C+    GL     RM  +       A YLEAH  V RV+YP+L SHPTY      L+     P  + FHV    +T  ++
Sbjct:   89 LVHGDELYCEVARTVRYVAEAQSKKMSTCAVDIRDHSRIRSLFAEKGAAIRLFHFEACTNPSGQLMDFAFL-KELRHLAPHCIFACDNTWLSGALFNPFEHGADIVLESMTKYVSAGRCIGGFVAGASSLMAPVLS-WIKAFGVFIGADHCEIFSQGLRTMSTRMTATSATAEALAAYLEAHPAVNRVMYPMLSSHPTYALARLYLTRG--GPGCIWFHVSASKKTVMSV 314          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A812XXM3_9DINO (MetZ protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812XXM3_9DINO)

HSP 1 Score: 156 bits (395), Expect = 1.770e-42
Identity = 90/230 (39.13%), Postives = 124/230 (53.91%), Query Frame = 1
Query:    4 VIVGNEMYGDLRGTVRYFADLMG--CTDDLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAI 687
            ++  N    ++  TV+Y ++  G   +   VD+R+ S L   F      I L   ESCTNPSGQ+MDF+ + K+L+  +   I   DNTWLS  LF P +HGAD+V+ES TKYVS GRCIGG VAG   L+  + S W++ +G F+    C+    GL     RM  +       A YLE H  V RV+YP+L SHPTY      L+     P  + FHV    +T  ++
Sbjct:    9 LLTSNCQLFEVARTVQYVSETQGKKMSTCAVDIREHSRLRSLFAEKGAAIRLFHFESCTNPSGQLMDFAFL-KELRHLAPHCIFACDNTWLSGALFNPFEHGADIVVESMTKYVSAGRCIGGFVAGASSLMAPVLS-WIKAFGVFVGADHCEIFSQGLQTINRRMTATSATAEALAAYLEGHPAVNRVMYPMLSSHPTYHLAQLYLTRG--GPGCIWFHVSASKKTVMSV 234          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A7S4HL42_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HL42_9EUKA)

HSP 1 Score: 149 bits (375), Expect = 3.400e-41
Identity = 74/157 (47.13%), Postives = 99/157 (63.06%), Query Frame = 1
Query:  265 WLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAIEELLQRTTLTVETSYG 735
            WL+  LF PLQ+GADL++ES TKYVS  RCIGGM+AG+  LV      W+++YG +I P QC     GL    +RMR SG +T + A++LE    V RVL+PLLESHPTY  N   L    + PSVL+FH+  + +T+  + +    + L  ETSYG
Sbjct:    1 WLTCELFNPLQYGADLIIESMTKYVSAARCIGGMMAGKTELVK-RALQWIKVYGLYINPDQCNIYEMGLETLSERMRSSGDITRRIAEFLEQKESVNRVLFPLLESHPTYSVNKNYLE---LGPSVLLFHINQKFKTRNQMMKFFSSSGLVAETSYG 153          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A6C0ELT2_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ELT2_9ZZZZ)

HSP 1 Score: 144 bits (364), Expect = 5.270e-38
Identity = 85/246 (34.55%), Postives = 141/246 (57.32%), Query Frame = 1
Query:    4 VIVGNEMYGDLRGTVRYFA-DLMGCTDDLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSN-WVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAIEELLQRTTLTVETSYG 735
            +++ +E+Y D    ++Y   D +    D+VDV D   +++ F+  ++   L  +ESC+NPSG+I+D++++  K+K  S   ++CVDNTWLS   F PL +GAD+V+ES +KY+SG +CIGGMV G+    N  + + W+R  GQ++    C+  + G+   +DR+  +G   L+ A++LE        +YP L SHP+ K     +S     P  + F+V      KR ++ L +   +  ETSYG
Sbjct:   63 ILLSDELYCDTPRLLKYQEKDYV----DIVDVTDNDTILKLFQ--NNDYDLFFLESCSNPSGKILDWTLI-PKIKEISPCCVICVDNTWLSGASFNPLSYGADIVIESMSKYISGSKCIGGMVVGK----NLDEVDMWLRKNGQYVADDHCRIFIQGIKSLKDRIEKTGRTALEVAKHLEKSY---TTMYPALLSHPSQKIFADTVSHC---PGNIWFYVPRTKSRKRIMDILNKNKEIAFETSYG 291          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A0G4IBF2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4IBF2_9ALVE)

HSP 1 Score: 146 bits (369), Expect = 8.760e-38
Identity = 97/248 (39.11%), Postives = 141/248 (56.85%), Query Frame = 1
Query:    4 VIVGNEMYGDLRGTVRYFADLM-GCTD-DLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSH-TLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIF-HVQHQARTKRAIEELLQRTTLTVETSYG 735
            ++ G+E+Y D+  TV+   D+  G  + + VDVRD + L   F      I +   E+CTNPSGQ+MD+ ++  +L+R + +     DNTWLS  + F PL  GADLV+ES TK++SGG CIGGM  G+  ++  + S +V I G FI   +C+     +    +R+  +    L+ AQ LEA   V RV++PLL SHPT+  N+RVL S     SV  F  VQ Q   K  I E  ++  L  +TS+G
Sbjct:   73 IVYGSELYCDVPRTVKLLCDMNPGRVEAEAVDVRDSNALRRLFTRCGKNIRIFHFEACTNPSGQMMDWDLI-PELRRLAPQCKFVCDNTWLSGGSGFNPLLLGADLVVESLTKHLSGGECIGGMALGKEEVMKPVIS-YVVIMGLFIPADRCRTFAKAVARCRERVARTSQTALKVAQKLEADPRVGRVMFPLLPSHPTHSINVRVLESCTGPGSVWFFVPVQKQEAVK--ILERREKAPLEYKTSFG 316          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A1V0SL56_9VIRU (Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Klosneuvirus KNV1 TaxID=1977640 RepID=A0A1V0SL56_9VIRU)

HSP 1 Score: 142 bits (357), Expect = 1.000e-36
Identity = 80/250 (32.00%), Postives = 134/250 (53.60%), Query Frame = 1
Query:    1 HVIVGNEMYGDLRGTVRYFADLMGCT-DDLVDVRDVSGLVEAFEV-HSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLR---VLSSAVIRPSVLIFHVQHQARTKRAIEELLQRTTLTVETSYG 735
            ++I GNE+Y D      YF ++ G   D+ +   D   LVE FE  +     ++ +ESC+NPSG I DFS++  KL+  S    V VDNTWL+  +F P +HG D  + S TKY  GG  IGG +      +      W ++ GQ ++P  C+ + + +L  +DR+ +S ++T +  +YL++   ++ + +PLL +H +Y   ++    ++   + PSVL F V+   +    I+     T L  +TS+G
Sbjct:   69 NIIYGNELYCDTPRLFEYFKEVYGMNIDEFMITSD--NLVELFETDYKAQNNILYIESCSNPSGYIFDFSMI-DKLRSLSNILYVIVDNTWLTEVIFNPFEHGCDFTVTSLTKYYGGGVAIGGAILSNNEPIMTSVMKWSKVNGQHVSPYNCELIYNNILTMKDRIANSSSLTTKVIEYLKSKPKISNMSHPLLANHVSYNLAIKYFKTINDVNLGPSVLTFMVK--TKKNNIIKFFKNNTILDFKTSFG 313          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A7S1ZAZ9_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZAZ9_TRICV)

HSP 1 Score: 140 bits (353), Expect = 1.540e-35
Identity = 88/250 (35.20%), Postives = 133/250 (53.20%), Query Frame = 1
Query:    4 VIVGNEMYGDLRGTVRYFADLM-GCTDDLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAG----VARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQ-HQARTKRAIEELLQRTTLTVETSYG 735
            ++ G+E+Y D++ ++ Y      G     VDVR+   +VE FE H ++I +   ESCTNPSGQ++DFS+  K        + VC DNTWL+  LF PL HGAD+V+ES TKY S G CIGG+  G    +  ++  W R++GQFI         + +   E+R+R +       A+ +E        V RV+YP L SHPT+      L      P  + FH+   ++R ++   EL    ++  +TS+G
Sbjct:  131 IVHGDELYTDVKRSIDYVCSKSPGAKSFAVDVRNSEIIVELFEEHGESIHVFHFESCTNPSGQMIDFSIFPKLRDLAPNCTFVC-DNTWLTAVLFNPLDHGADIVVESCTKYASAGTCIGGVACGSADKMRSVRE-WNRVFGQFIPDTVMDLFSEQVPGMEERVRRASQNAFTIAREMEEDIVLTQLVDRVMYPGLASHPTHDVAKTYLKRGY--PGCVWFHMSISRSRFQKKAPEL----SMDFKTSFG 372          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A1Q9D1L9_SYMMI (Sodium/calcium exchanger 2 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9D1L9_SYMMI)

HSP 1 Score: 143 bits (361), Expect = 2.270e-35
Identity = 88/220 (40.00%), Postives = 111/220 (50.45%), Query Frame = 1
Query:   43 TVRYFADLMG-----CTDDLVDVRDVSGLVEAFEVHSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAI 687
            TVRY ++  G     CT   VD+R+ S L   F      I L   ESCTNPSGQ+MD                    NTWLS  LF P +HGAD+V+ES TKYVS GRCIGG VAG   L+  + S W++ +G F+    C+    GL     RM  +       A YLEAH  V RV+YP+L SHPTY      L+     P  + FHV    +T  ++
Sbjct: 1275 TVRYVSETQGKKMSTCT---VDIREHSRLRSLFAEKGAAIRLFHFESCTNPSGQLMD--------------------NTWLSGALFNPFEHGADIVVESMTKYVSAGRCIGGFVAGASSLMAPVLS-WIKAFGVFVGADHCEIFSQGLQTINRRMTATSATAEALAAYLEAHPAVNRVMYPMLSSHPTYHLARLYLTRG--GPGCIWFHVSASKKTVMSV 1468          
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Match: A0A3G4ZT98_9VIRU (Cys/Met metabolism, pyridoxal phosphate-dependent enzyme n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZT98_9VIRU)

HSP 1 Score: 135 bits (341), Expect = 1.670e-34
Identity = 85/247 (34.41%), Postives = 131/247 (53.04%), Query Frame = 1
Query:    1 HVIVGNEMYGDLRGTVRYFADLMGCTDDLVDVRDVSGLVEAFEV--HSDTIALMSMESCTNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLESTTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGLLDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSSAVIRPSVLIFHVQHQARTKRAIEELLQRTTLTVETSYG 735
            ++I GNE+Y D     +Y   +       +DV D +  +E F+      T  L  +E+C+NPSG I D S+V KKL+  S++  V VDNTWLS  ++ PL HGAD+V+ S TKY SGG  IGG V  R   +      ++R  G  I+P+QC+ + + +   + R++ S  +T + A  L  H  V  V +P L +HP+      + +   I PSVL F ++   +  R   EL+    +  +TS+G
Sbjct:   66 NLIYGNELYCDTPRLFKYLKPVYKYNSCEIDVTDTNYTMELFKTKFRMQTNVLF-VEACSNPSGFIFDMSIV-KKLRDMSKKLFVIVDNTWLSSVIYNPLDHGADVVISSLTKYYSGGTHIGGAVMTRDDKIYNKIYEYIRFTGVHISPLQCKTISENIDTIDQRIKKSSKLTTEIAVRLSEHENVLDVSHPSLINHPSSCLAKNLFNG--IYPSVLTFKIKQSEKKAR---ELMNACGIEYKTSFG 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74602.17649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812MJA4_SYMPI5.800e-4640.73MetC protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A812TU80_9DINO1.130e-4541.30Cth protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxI... [more]
A0A812XXM3_9DINO1.770e-4239.13MetZ protein n=2 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A7S4HL42_9EUKA3.400e-4147.13Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A6C0ELT2_9ZZZZ5.270e-3834.55Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A0G4IBF2_9ALVE8.760e-3839.11Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A1V0SL56_9VIRU1.000e-3632.00Cystathionine beta-lyase/cystathionine gamma-synth... [more]
A0A7S1ZAZ9_TRICV1.540e-3535.20Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A1Q9D1L9_SYMMI2.270e-3540.00Sodium/calcium exchanger 2 n=3 Tax=Symbiodinium Ta... [more]
A0A3G4ZT98_9VIRU1.670e-3434.41Cys/Met metabolism, pyridoxal phosphate-dependent ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74602contigM-pyrifera_M_contig74602:237..971 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score115.5
Seed ortholog evalue3.3e-23
Seed eggNOG ortholog5762.XP_002673405.1
Preferred nameSTR2
KEGG rclassRC00020,RC00056,RC00069,RC00420,RC02848,RC02866
KEGG koko:K01739
KEGG ReactionR00999,R01288,R02508,R03217,R03260,R04944,R04945,R04946
KEGG Pathwayko00270,ko00450,ko00920,ko01100,ko01110,ko01130,ko01230,map00270,map00450,map00920,map01100,map01110,map01130,map01230
KEGG ModuleM00017
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0017144,GO:0019279,GO:0019281,GO:0019346,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0050667,GO:0071265,GO:0071266,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.cystathionine gamma-synthase activity
EggNOG OGsCOG0626@1,KOG0053@2759
EC2.5.1.48
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size735
Cds size714
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816644.5114076-UTR-M-pyrifera_M_contig74602:236..2571622816644.5114076-UTR-M-pyrifera_M_contig74602:236..257Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74602 237..257 +
1692278095.6526778-UTR-M-pyrifera_M_contig74602:236..2571692278095.6526778-UTR-M-pyrifera_M_contig74602:236..257Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74602 237..257 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816644.5243847-CDS-M-pyrifera_M_contig74602:257..9711622816644.5243847-CDS-M-pyrifera_M_contig74602:257..971Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74602 258..971 +
1692278095.6680644-CDS-M-pyrifera_M_contig74602:257..9711692278095.6680644-CDS-M-pyrifera_M_contig74602:257..971Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74602 258..971 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74602.17649.1prot_M-pyrifera_M_contig74602.17649.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74602 258..971 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74602.17649.1

>prot_M-pyrifera_M_contig74602.17649.1 ID=prot_M-pyrifera_M_contig74602.17649.1|Name=mRNA_M-pyrifera_M_contig74602.17649.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MYGDLRGTVRYFADLMGCTDDLVDVRDVSGLVEAFEVHSDTIALMSMESC
TNPSGQIMDFSVVCKKLKRFSRRSIVCVDNTWLSHTLFKPLQHGADLVLE
STTKYVSGGRCIGGMVAGRVRLVNYMQSNWVRIYGQFITPVQCQYVLDGL
LDFEDRMRHSGTVTLQAAQYLEAHAGVARVLYPLLESHPTYKTNLRVLSS
AVIRPSVLIFHVQHQARTKRAIEELLQRTTLTVETSYG
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mRNA from alignment at M-pyrifera_M_contig74602:237..971+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74602.17649.1 ID=mRNA_M-pyrifera_M_contig74602.17649.1|Name=mRNA_M-pyrifera_M_contig74602.17649.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig74602:237..971+ (Macrocystis pyrifera P11B4 male)
CACGTTATCGTCGGCAACGAGATGTACGGTGACTTGCGGGGCACGGTCAG GTATTTCGCAGATCTCATGGGCTGTACGGATGATCTCGTGGACGTTCGTG ATGTCTCAGGTCTTGTCGAGGCGTTTGAGGTGCACAGTGACACCATTGCG CTGATGTCCATGGAGTCTTGCACCAACCCATCTGGCCAGATCATGGACTT CAGTGTCGTGTGCAAGAAGCTGAAGCGCTTTTCGAGGCGCAGCATTGTTT GCGTGGACAACACATGGCTGTCACACACTCTCTTCAAGCCCCTTCAGCAT GGTGCCGACCTAGTACTGGAGTCTACAACAAAGTACGTGAGTGGTGGCCG CTGCATTGGTGGCATGGTAGCGGGCAGGGTACGCTTGGTCAACTACATGC AATCCAACTGGGTTCGCATCTACGGCCAGTTCATCACGCCAGTGCAGTGC CAGTACGTCTTAGATGGCCTCCTCGACTTCGAAGATCGCATGAGGCACTC TGGCACCGTAACACTCCAGGCGGCGCAGTACCTAGAGGCGCACGCCGGCG TCGCTCGAGTTCTCTACCCACTTCTGGAGAGTCATCCCACGTACAAGACG AACCTCAGGGTGCTCTCCAGTGCCGTCATTAGGCCTTCCGTTCTCATATT TCACGTGCAGCATCAAGCGCGCACGAAGAGAGCCATCGAGGAGCTCCTCC AGCGCACAACGCTGACGGTCGAAACCTCCTACGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74602:237..971+

>mRNA_M-pyrifera_M_contig74602.17649.1 ID=mRNA_M-pyrifera_M_contig74602.17649.1|Name=mRNA_M-pyrifera_M_contig74602.17649.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig74602:237..971+ (Macrocystis pyrifera P11B4 male)
ATGTACGGTGACTTGCGGGGCACGGTCAGGTATTTCGCAGATCTCATGGG
CTGTACGGATGATCTCGTGGACGTTCGTGATGTCTCAGGTCTTGTCGAGG
CGTTTGAGGTGCACAGTGACACCATTGCGCTGATGTCCATGGAGTCTTGC
ACCAACCCATCTGGCCAGATCATGGACTTCAGTGTCGTGTGCAAGAAGCT
GAAGCGCTTTTCGAGGCGCAGCATTGTTTGCGTGGACAACACATGGCTGT
CACACACTCTCTTCAAGCCCCTTCAGCATGGTGCCGACCTAGTACTGGAG
TCTACAACAAAGTACGTGAGTGGTGGCCGCTGCATTGGTGGCATGGTAGC
GGGCAGGGTACGCTTGGTCAACTACATGCAATCCAACTGGGTTCGCATCT
ACGGCCAGTTCATCACGCCAGTGCAGTGCCAGTACGTCTTAGATGGCCTC
CTCGACTTCGAAGATCGCATGAGGCACTCTGGCACCGTAACACTCCAGGC
GGCGCAGTACCTAGAGGCGCACGCCGGCGTCGCTCGAGTTCTCTACCCAC
TTCTGGAGAGTCATCCCACGTACAAGACGAACCTCAGGGTGCTCTCCAGT
GCCGTCATTAGGCCTTCCGTTCTCATATTTCACGTGCAGCATCAAGCGCG
CACGAAGAGAGCCATCGAGGAGCTCCTCCAGCGCACAACGCTGACGGTCG
AAACCTCCTACGGCATGTACGGTGACTTGCGGGGCACGGTCAGGTATTTC
GCAGATCTCATGGGCTGTACGGATGATCTCGTGGACGTTCGTGATGTCTC
AGGTCTTGTCGAGGCGTTTGAGGTGCACAGTGACACCATTGCGCTGATGT
CCATGGAGTCTTGCACCAACCCATCTGGCCAGATCATGGACTTCAGTGTC
GTGTGCAAGAAGCTGAAGCGCTTTTCGAGGCGCAGCATTGTTTGCGTGGA
CAACACATGGCTGTCACACACTCTCTTCAAGCCCCTTCAGCATGGTGCCG
ACCTAGTACTGGAGTCTACAACAAAGTACGTGAGTGGTGGCCGCTGCATT
GGTGGCATGGTAGCGGGCAGGGTACGCTTGGTCAACTACATGCAATCCAA
CTGGGTTCGCATCTACGGCCAGTTCATCACGCCAGTGCAGTGCCAGTACG
TCTTAGATGGCCTCCTCGACTTCGAAGATCGCATGAGGCACTCTGGCACC
GTAACACTCCAGGCGGCGCAGTACCTAGAGGCGCACGCCGGCGTCGCTCG
AGTTCTCTACCCACTTCTGGAGAGTCATCCCACGTACAAGACGAACCTCA
GGGTGCTCTCCAGTGCCGTCATTAGGCCTTCCGTTCTCATATTTCACGTG
CAGCATCAAGCGCGCACGAAGAGAGCCATCGAGGAGCTCCTCCAGCGCAC
AACGCTGACGGTCGAAACCTCCTACGGC
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