mRNA_M-pyrifera_M_contig7458.17647.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7458.17647.1
Unique NamemRNA_M-pyrifera_M_contig7458.17647.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI)

HSP 1 Score: 302 bits (773), Expect = 2.450e-97
Identity = 154/244 (63.11%), Postives = 188/244 (77.05%), Query Frame = 1
Query:    1 AASCWRRVFSGQNKWGQLGRGDRN-VTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPLEGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVK 729
            +A CW     G N+WGQLGRGD   + GD+PDEMGD L+ V +G G VA ++ALGE+H+C++LDSG   CFG+ND GQLGLGDT  RG++AG++G+A    D G GLSA A+  GC HTCGLL DG+VKCFGYNNYGQLGQG+T+N+GD+ G MGDDLPAV L+G +  A+AAGCD TCA+++ G VMCWGRNT GQLG GD  DRLDG+ + LVAVDLDGS A AIAAGE+H C L  D S+K
Sbjct:   37 SAKCW-----GNNRWGQLGRGDNTTLIGDEPDEMGDNLVAVPVG-GTVA-EVALGEDHTCMLLDSGNVVCFGKNDSGQLGLGDTSTRGQIAGDVGEA---ADLGAGLSAVAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDG-TVSAVAAGCDHTCALMDDGTVMCWGRNTHGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIK 269          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A6H5L2S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S4_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 2.750e-86
Identity = 136/219 (62.10%), Postives = 166/219 (75.80%), Query Frame = 1
Query:   73 VTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPLEGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVK 729
            + GDDPDEMGD L+ V +G G VA +MALGE+H+C++LDSG   CFG+ND GQLGLGDT  RG++AG++G+A    D G GLSA A+ +GC HTCGLL DG+VKCFGY        G+TDN+GD+ G MGDDLPAV L+G +  A+AAGCD TCA+++ G VMCWGRNT GQLG GD  DRLDG  ++LVAVDLDGS A AIAAGE+H C L  D S+K
Sbjct:    1 MVGDDPDEMGDNLVAVSVG-GTVA-EMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEA---ADLGAGLSAVAVAAGCRHTCGLLDDGTVKCFGYTT------GTTDNMGDDAGEMGDDLPAVSLDG-TVSAVAAGCDHTCALMDDGTVMCWGRNTHGQLGTGDSDDRLDGSGLELVAVDLDGSVATAIAAGESHTCALLDDDSIK 207          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 220 bits (561), Expect = 7.770e-66
Identity = 126/245 (51.43%), Postives = 156/245 (63.67%), Query Frame = 1
Query:   10 CWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729
            CW     G N  GQLG GD +  GDD  EMG++L  V LGTG  A  ++ G  H+C +LD+G  KC+G N+ GQLGLGDT  RG   GE+GD LP +  GTG +ATAI+ G  HTC LL +GSVKC+GYN YGQLG G T + GD  G MGD LPA+ L  G +A AI+ G   TCA+L+ G++ CWG N +GQLG GD + R DG       L A+ L  G +AKAI+AG  H C L  + SVK
Sbjct:   65 CW-----GANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVK 304          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A4V5PJ66_9DELT (Uncharacterized protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4V5PJ66_9DELT)

HSP 1 Score: 216 bits (549), Expect = 8.670e-64
Identity = 125/245 (51.02%), Postives = 150/245 (61.22%), Query Frame = 1
Query:   10 CWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDL-DGSSAKAIAAGETHVCVLNQDASVK 729
            CW     G N++GQLG GD    GD P +MG  L KVDLG G+ AV ++  + H+C ++ +G  KC+G N +GQLGLGD E RG  A E+GDALP VD G+G  A AI +G SHTC LL  G+VKC+G N  GQLG G  ++ GD  G MGD LPA+ L  G SA AIAAG    CA+L GGA+ CWG N  GQLG GD  DR D        L  V+L  G  A AI AG  H C L  D +VK
Sbjct:  103 CW-----GYNQFGQLGLGDTQTRGDMPGQMGSALPKVDLGPGQNAVAISAADNHACALISNGTVKCWGINSEGQLGLGDMESRGHAADEMGDALPNVDLGSGKIAIAIAAGYSHTCALLAGGAVKCWGSNYSGQLGLGDQEDRGDAPGEMGDALPAIDLGPGQSATAIAAGAAHVCALLAGGAIKCWGENHLGQLGLGDNNDRGDQPGEMGSALPTVNLGSGQKAAAITAGAYHNCALLMDGAVK 342          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A7Z9UFE8_9BACT (Big_5 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UFE8_9BACT)

HSP 1 Score: 218 bits (554), Expect = 3.770e-63
Identity = 118/244 (48.36%), Postives = 155/244 (63.52%), Query Frame = 1
Query:    1 AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVK 729
            +  CW     G+N  GQLG G+ +  GD+  EMGD L  VDLGTG  A  +A G+ H+C +LD+   KC+G N  GQLG+GDT  RG  + E+GD LP +D G+G +ATAIT+G  HTC +L + S+KC+G N  GQLG G T N GDE   MGD LPAV L  G +A  I AG   TC IL+  ++ CWG N  GQLG G+  D L+   VD+ +    G +AKAIAAGE+H CV+  ++++K
Sbjct:  267 SVKCW-----GKNNLGQLGLGNTSNRGDNSSEMGDNLPVVDLGTGRTAKAIAAGDYHTCAILDNASIKCWGANASGQLGIGDTNNRGDESSEMGDILPAIDLGSGRTATAITAGNQHTCAILDNASIKCWGANASGQLGIGDTSNRGDESSEMGDTLPAVDLGSGRTAKVIVAGGSHTCTILDDSSIKCWGENDQGQLGLGNTTDSLNASVVDMGS----GITAKAIAAGESHTCVILNNSAIK 501          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO)

HSP 1 Score: 222 bits (565), Expect = 1.090e-62
Identity = 130/248 (52.42%), Postives = 157/248 (63.31%), Query Frame = 1
Query:    1 AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729
            +  CW     G N++GQLG GD +  GD P EMGD L  V LGTG  A  ++ G  H+C +LD+G  KC+G ND G LGLGDT PRG   GE+GD LP V  GTG +ATAI +G  HTC LL +GSVKC+G N+YG LG G T   GD  G MGD LPAV L  G +A AI+AG  +TCA+L+ G+V CWG N  GQLG GD + R DG       L AV+L  G +A AI+AG  H C L  + SVK
Sbjct: 1647 SVKCW-----GWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAIFAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSYRGDGPGEMGDTLPAVALGTGRTATAISAGSRYTCALLDNGSVKCWGWNDDGQLGLGDTSRRGDGPGEMGDTLPAVELGTGRTATAISAGGWHTCALLDNGSVK 1889          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO)

HSP 1 Score: 214 bits (545), Expect = 3.290e-62
Identity = 127/245 (51.84%), Postives = 148/245 (60.41%), Query Frame = 1
Query:   10 CWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729
            CW     G+N  GQLG GD    GD  DEMGD L  VDLGTG   V +A G+ H+C +L  G  KC+G N  GQLGLGDT PRG   GE+GDALP V+ GTG +A AI  G  HTC LL DGSVKC+G+N  G+LG G T   GD  G MGD L AV L  G +A A++ G    CA+L+ G+V CWG N  GQLG GD   R DG       L AVDL  G +A A+ AG  H C L  D S+K
Sbjct:  214 CW-----GRNVQGQLGLGDTEPRGDAADEMGDALPAVDLGTGVTVVGLAAGDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGPGEMGDALPTVNLGTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLK 453          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A382THL9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382THL9_9ZZZZ)

HSP 1 Score: 203 bits (517), Expect = 1.250e-61
Identity = 122/235 (51.91%), Postives = 145/235 (61.70%), Query Frame = 1
Query:   46 GQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLD-----GDNVDLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729
            GQLG+G RN  GD P EMGD L  VDLGTG+ A  +A GE  +C +L+ G  KC+G N  GQLG G +   G   GE+GD L  VD GTG SATAI+ G    C LL DG+VKC+G NN G+LGQG T+ +GD+ G MGD+L AV L  G +A AIAAG  + CA L  G + CWG N  GQLG G      D     GDN  L AVDL  G +A A++AG  H C L  D SVK
Sbjct:    3 GQLGQGHRNSLGDGPGEMGDNLAAVDLGTGKTATAIATGEADTCALLNDGTVKCWGSNGYGQLGQGHSRSLGGDPGEMGDNLAAVDLGTGKSATAISGGTHFFCALLNDGTVKCWGRNNGGRLGQGHTNRIGDQDGEMGDNLAAVDLGTGKTATAIAAGNGYVCATLNDGTLKCWGENDLGQLGQGHANFLGDDPGEMGDN--LAAVDLGTGKTATALSAGYNHTCALLNDNSVK 235          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A848LHZ3_9DELT (Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LHZ3_9DELT)

HSP 1 Score: 211 bits (538), Expect = 2.640e-61
Identity = 128/249 (51.41%), Postives = 151/249 (60.64%), Query Frame = 1
Query:    1 AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDM-ALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDN---VDLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729
            A  CW     G N  G LG GD    G+ P EM D L  VDLGTG  A  + A G  ++C +LD    KC+G N  GQLGLGDT  RG   GE+GDALP VD G G +A A+TSG SHTC LL D SVKC+GYN +GQLG G T   GD  G MGD LP V L  G +A AI AG   TCA+L+ G++ CWG N +GQLG GD A R DG       L  V+L  G +AKA++ GE + C L  DA+VK
Sbjct:  260 AVKCW-----GANSSGSLGLGDTARRGNGPGEMDDALSPVDLGTGRTARALTANGSGYTCALLDDASVKCWGDNSHGQLGLGDTRSRGDGPGEMGDALPPVDLGRGRTAKALTSGYSHTCALLDDDSVKCWGYNEFGQLGLGDTRIRGDGPGEMGDALPTVKLGAGRTARAIVAGGYSTCALLDDGSIQCWGYNEYGQLGLGDTAHRGDGPGEMEAALPRVNLGTGRTAKALSLGEFYTCALLDDATVK 503          
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A3M1N8Z3_9BACT (T9SS C-terminal target domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1N8Z3_9BACT)

HSP 1 Score: 206 bits (524), Expect = 3.880e-61
Identity = 113/202 (55.94%), Postives = 134/202 (66.34%), Query Frame = 1
Query:   46 GQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLD-----GDNV 633
            GQLG GD +  GD P EMGD L  VDLGTG     +ALG  HSC + D G  KC+G+N  GQLGLGD   RG   GE+GD LP VD GTG +ATAI +G S TC LL DGSVKC+G  +YGQLGQG T + GD+ G MGD+LP + L  G +A+AIAAG    CA+L+ G+V CWG N +GQLG GD   R D     GDN+
Sbjct:    2 GQLGLGDTSDRGDAPGEMGDNLPAVDLGTGRTPTALALGNSHSCALFDDGAVKCWGKNRRGQLGLGDINDRGDAPGEMGDNLPTVDLGTGRTATAIAAGESFTCALLDDGSVKCWGEGDYGQLGQGDTAHRGDDPGEMGDNLPPIDLGAGRTAIAIAAGSFHACALLDDGSVKCWGANDYGQLGQGDTNYRGDDPGEMGDNL 203          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS37_ECTSI2.450e-9763.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2S4_9PHAE2.750e-8662.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835T669_9CHLO7.770e-6651.43Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A4V5PJ66_9DELT8.670e-6451.02Uncharacterized protein n=2 Tax=Polyangium aurulen... [more]
A0A7Z9UFE8_9BACT3.770e-6348.36Big_5 domain-containing protein n=1 Tax=Candidatus... [more]
A0A835T094_9CHLO1.090e-6252.42Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A0K1EHP4_CHOCO3.290e-6251.84Uncharacterized protein n=2 Tax=Chondromyces croca... [more]
A0A382THL9_9ZZZZ1.250e-6151.91Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A848LHZ3_9DELT2.640e-6151.41Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fall... [more]
A0A3M1N8Z3_9BACT3.880e-6155.94T9SS C-terminal target domain-containing protein (... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7458contigM-pyrifera_M_contig7458:9213..12509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score302.8
Seed ortholog evalue1.5e-79
Seed eggNOG ortholog2880.D7FS37
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquitin-protein transferase activity
EggNOG OGsCOG5021@1,KOG0941@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size735
Cds size735
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7458.17647.1prot_M-pyrifera_M_contig7458.17647.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7458 9213..12509 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816644.3808687-CDS-M-pyrifera_M_contig7458:9212..94161622816644.3808687-CDS-M-pyrifera_M_contig7458:9212..9416Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 9213..9416 +
1692278095.565558-CDS-M-pyrifera_M_contig7458:9212..94161692278095.565558-CDS-M-pyrifera_M_contig7458:9212..9416Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 9213..9416 +
1622816644.3910692-CDS-M-pyrifera_M_contig7458:9891..101071622816644.3910692-CDS-M-pyrifera_M_contig7458:9891..10107Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 9892..10107 +
1692278095.5896053-CDS-M-pyrifera_M_contig7458:9891..101071692278095.5896053-CDS-M-pyrifera_M_contig7458:9891..10107Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 9892..10107 +
1622816644.4017935-CDS-M-pyrifera_M_contig7458:11368..115141622816644.4017935-CDS-M-pyrifera_M_contig7458:11368..11514Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 11369..11514 +
1692278095.603272-CDS-M-pyrifera_M_contig7458:11368..115141692278095.603272-CDS-M-pyrifera_M_contig7458:11368..11514Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 11369..11514 +
1622816644.4208028-CDS-M-pyrifera_M_contig7458:12340..125091622816644.4208028-CDS-M-pyrifera_M_contig7458:12340..12509Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 12341..12509 +
1692278095.6122344-CDS-M-pyrifera_M_contig7458:12340..125091692278095.6122344-CDS-M-pyrifera_M_contig7458:12340..12509Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7458 12341..12509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7458.17647.1

>prot_M-pyrifera_M_contig7458.17647.1 ID=prot_M-pyrifera_M_contig7458.17647.1|Name=mRNA_M-pyrifera_M_contig7458.17647.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVD
MALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEV
DFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEM
GHMGDDLPAVPLEGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAG
DRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVKV*
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mRNA from alignment at M-pyrifera_M_contig7458:9213..12509+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7458.17647.1 ID=mRNA_M-pyrifera_M_contig7458.17647.1|Name=mRNA_M-pyrifera_M_contig7458.17647.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3297bp|location=Sequence derived from alignment at M-pyrifera_M_contig7458:9213..12509+ (Macrocystis pyrifera P11B4 male)
GCCGCCTCTTGTTGGCGTCGTGTGTTTTCAGGGCAAAACAAATGGGGGCA GCTCGGGAGGGGGGACAGAAATGTGACCGGCGACGACCCCGACGAGATGG GGGACAAGCTCATCAAAGTCGACCTCGGCACGGGAGAGGTCGCAGTGGAC ATGGCTCTCGGGGAAGAGCACAGCTGTGTCATGCTCGATTCTGGCGGCAC GAAGGTTTGTGTGAGGGGGTAGGATACGGGGGGGGGGGGGGTATTCACTT GTTGTCCACCAGTGAGAATACCGTATTTATATTATGCCAGGGACTGCTTT AGCATTATCGTTGTATGTGTTGCGCATGTTCCATGGAACACACGACAGAA GCGCGTGGCATGGTCTATGATCCTAGCTGGTGGCCGCTGCAGATTACGAG TACGTCAAATAGGAGTTTCAACGAAGCCTTGCGCAGCATGACGTACTCTG TAGGACTGCTTGTAAAAACGCGTTCCATCTTGGATACCTGGTAGACTATC AGTAGTAGTCAATGTTCGATATATCCGACGTACCGATAACAGTAGTGTAA CATTACGGATACTTGCCGCCAATCCACCGCCCCTTGTTGCTCCCGCCTCA TTGCATACCTGCCTTTTTTCACACTTTCTACTCGGACGAATATTTACGCT TTTTCACCGGCATATATTTCTATTAATAGTGCTTCGGACAAAACGACGAC GGGCAGCTCGGCCTCGGCGACACGGAGCCTCGTGGCAGAATGGCCGGCGA GCTCGGCGACGCCCTCCCCGAGGTGGACTTCGGCACCGGCCTCTCCGCGA CGGCGATCACGAGCGGGTGCTCCCACACGTGCGGTCTCCTGACGGACGGG TCCGTGAAGTGCTTCGGGTACAACAACTACGGACAGTTGGGCCAGGTGCG GGAAACGGAACGGAGCGGAACGGCAGCACTGCTGCTGATTCTTTCTGCCT TCCCATGCTTGGCTTAGTCGTGGTGGTTAGTTGCATTGTCCTTGCTGGTA CTGTTCTACCCTAGGTATTTGTTTACTACTCTGTTGCTCAAAAGACGGAA ACACTACGTACTGCTGTTCAATCACAGCCCTTGATTATATTGACCGTTTG GCCTCTGGTGTGCATATCAATCGGGTGTTGTATTCCCGGGCATGGTGGAA ATGGAACAAAATATATCATACCCAGTTACCCAGTACCACTCCGTAACTAA ATATGTGCACGGTATGCTTCTGTTAATATTCAGTCCAAACGATCCTTATA TTACGAAACAGGGCGGTACCTCTTTTTCCTTGTATAATTAGTTCAAAACT TGTATGGGCTGGCCGGTGTTACTTGCGCGATTACTTGCCCGGTCGTGGCT ACTGCTGTACCTGCTTTAGTCCCGTTTTGGGGAGAAACTGCGTTTAATTT GAGCGGTTTGGCCCCAAAACGGGACTACTGCAGTCCTATTACGGGGGGGA CCATAGTAAATAGGACTACGGCGTACACAAAAACCTATAATTTTGCCTAT TTTTACTAGCAATATTTGATGCTATTTTACTGTGGTCCCCCGTAATAATA GGGTTAAGCTTCGAAGAGTTTTTTTTTAATGTTGTTCCGTCTTGCCCGGT GGCTACGTACGGATAGTATAAATAGCTGGTACGTACGAAGGATTAACGCC TCCTGTGTCCTCCCTTTTCAGCACGCAACACCCCCGGGGGATGTCAAAGT CATGGAACCACAATCCCGAAGGGAACCTTGTAACTACTCTCAGTAGTACA TACAAGGACCTTGTGCGTGTTTAGGTGGAGTACCAGGTGTATAGCCACAT GGGGGATCTTGAGCAAGCGTTTCACACTGCACCCACCTTCTGTCTGGTAC GAGTGGTATGATAAGACACAGCTGCTGCTTGTCTACGGCGACAAGGGAAG ATTACGGGGGATAATTGTTGCAATAGTGGTCGAAAGAGAAAAGAAGGGAG AGTGGAGAGAGCTTTGTATGTACGATTACGATTTCTCCGTTTGTTGTTGG TTGGTTGATCTTGTTGTCGTTTCGATCACCTCGCGTCCCGGTAGGTCGCA CAATGTATAGTTACATAGTTACTCGCGTCCTACCGGCATGCACGCAACAA CCGTAGTTATCCCGTCCTCCCGCCCTCCCCCCCGCCGCCGTTGCTGACAC ATGCAGGGATCGACCGACAATGTCGGCGACGAAATGGGTCACATGGGCGA CGACCTCCCTGCCGTCCCCCTTGAAGGCGCGAGCGCGGTCGCCATCGCTG CCGGGTGCGACTTCACGTGCGCGATCTTGGAAGGTGGCGCCGTCATGTGC TGGTGAGTTGATGTGATGCCGACGTTGCTCATAGCAGAGCAGCAGTAGCG AGCTGTTCGCATAGATCGAGACAGCAGCACATAGCGAGCTATAATAATGA AAGATAATATACTGTTGTTTGAGCAATCGTAGCTCCGCACATTCATCCAT CCGCCCGTTTGGGAGACACTCCGCTCCCTGCGCGTGCATTTTCATTGCCT AAAATAAAAGAAAGGTGTACGTGCAGTGGTCGACCCTAAAAAGTATTCTA TCCAGCTGACATCTTACGTAGTTCTATTATTTTCGATAGCAATAACAAGT TACCGATCATCGACTCGGTAGGCTAGTGACAAGGACACTGGCTATCGCGG CTGTATATATATGCGGCAAATTTCACGTACCAGTACCAGGTATCTGGTAT CCCCGGTGGGTCGGCTGGTGGTCCTCGTGCCTTATCAACGAACAATTTCG TTGGTTCGAGTCTCACCGAGTGCATGCTTGTCGGGACTTACAAAAAATTG ATACAGCGGAAAGCGCGAGAGAGTTTGTTGGCTACATTTGATGAAAATCG ACGAACGGTGGGAATGCTAAACCCTATGCGCGACAAAAAATAAAGGCACG TGCCGGGGGGAGAGAAGGGGTAACACCTGTGTCCACGGCTTGTCCAGAAG ATCGCTGAGGGTAAAACGTCGTATACCTCACGAGGTGCTTGCTATTAATA TTAGGGTTGCCTCAGTTTCTCGGAGAAGAGTGTCCGCTTTTTTTTTTTTT GCTCTCTGTGAGTGTTCCTGCATGCAACCTCTGTACCAACCATGTTGATG TGTGTTGCGACTTTTGATCTTTTGGCAGGGGTCGCAACACCTGGGGCCAG CTTGGCGCCGGCGACCGCGCGGACCGCCTGGACGGGGACAACGTGGATCT CGTTGCCGTCGACCTTGATGGTTCTTCCGCGAAGGCCATCGCCGCTGGCG AGACCCACGTCTGCGTGCTCAACCAAGACGCCTCTGTCAAGGTGTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7458:9213..12509+

>mRNA_M-pyrifera_M_contig7458.17647.1 ID=mRNA_M-pyrifera_M_contig7458.17647.1|Name=mRNA_M-pyrifera_M_contig7458.17647.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig7458:9213..12509+ (Macrocystis pyrifera P11B4 male)
GCCGCCTCTTGTTGGCGTCGTGTGTTTTCAGGGCAAAACAAATGGGGGCA
GCTCGGGAGGGGGGACAGAAATGTGACCGGCGACGACCCCGACGAGATGG
GGGACAAGCTCATCAAAGTCGACCTCGGCACGGGAGAGGTCGCAGTGGAC
ATGGCTCTCGGGGAAGAGCACAGCTGTGTCATGCTCGATTCTGGCGGCAC
GAAGGCCGCCTCTTGTTGGCGTCGTGTGTTTTCAGGGCAAAACAAATGGG
GGCAGCTCGGGAGGGGGGACAGAAATGTGACCGGCGACGACCCCGACGAG
ATGGGGGACAAGCTCATCAAAGTCGACCTCGGCACGGGAGAGGTCGCAGT
GGACATGGCTCTCGGGGAAGAGCACAGCTGTGTCATGCTCGATTCTGGCG
GCACGAAGTGCTTCGGACAAAACGACGACGGGCAGCTCGGCCTCGGCGAC
ACGGAGCCTCGTGGCAGAATGGCCGGCGAGCTCGGCGACGCCCTCCCCGA
GGTGGACTTCGGCACCGGCCTCTCCGCGACGGCGATCACGAGCGGGTGCT
CCCACACGTGCGGTCTCCTGACGGACGGGTCCGTGAAGTGCTTCGGGTAC
AACAACTACGGACAGTTGGGCCAGTGCTTCGGACAAAACGACGACGGGCA
GCTCGGCCTCGGCGACACGGAGCCTCGTGGCAGAATGGCCGGCGAGCTCG
GCGACGCCCTCCCCGAGGTGGACTTCGGCACCGGCCTCTCCGCGACGGCG
ATCACGAGCGGGTGCTCCCACACGTGCGGTCTCCTGACGGACGGGTCCGT
GAAGTGCTTCGGGTACAACAACTACGGACAGTTGGGCCAGGGATCGACCG
ACAATGTCGGCGACGAAATGGGTCACATGGGCGACGACCTCCCTGCCGTC
CCCCTTGAAGGCGCGAGCGCGGTCGCCATCGCTGCCGGGTGCGACTTCAC
GTGCGCGATCTTGGAAGGTGGCGCCGTCATGTGCTGGGATCGACCGACAA
TGTCGGCGACGAAATGGGTCACATGGGCGACGACCTCCCTGCCGTCCCCC
TTGAAGGCGCGAGCGCGGTCGCCATCGCTGCCGGGTGCGACTTCACGTGC
GCGATCTTGGAAGGTGGCGCCGTCATGTGCTGGGGTCGCAACACCTGGGG
CCAGCTTGGCGCCGGCGACCGCGCGGACCGCCTGGACGGGGACAACGTGG
ATCTCGTTGCCGTCGACCTTGATGGTTCTTCCGCGAAGGCCATCGCCGCT
GGCGAGACCCACGTCTGCGTGCTCAACCAAGACGCCTCTGTCAAGGTGTG
AGGGTCGCAACACCTGGGGCCAGCTTGGCGCCGGCGACCGCGCGGACCGC
CTGGACGGGGACAACGTGGATCTCGTTGCCGTCGACCTTGATGGTTCTTC
CGCGAAGGCCATCGCCGCTGGCGAGACCCACGTCTGCGTGCTCAACCAAG
ACGCCTCTGTCAAGGTGTGA
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