mRNA_M-pyrifera_M_contig7458.17647.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: D7FS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS37_ECTSI) HSP 1 Score: 302 bits (773), Expect = 2.450e-97 Identity = 154/244 (63.11%), Postives = 188/244 (77.05%), Query Frame = 1 Query: 1 AASCWRRVFSGQNKWGQLGRGDRN-VTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPLEGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVK 729 +A CW G N+WGQLGRGD + GD+PDEMGD L+ V +G G VA ++ALGE+H+C++LDSG CFG+ND GQLGLGDT RG++AG++G+A D G GLSA A+ GC HTCGLL DG+VKCFGYNNYGQLGQG+T+N+GD+ G MGDDLPAV L+G + A+AAGCD TCA+++ G VMCWGRNT GQLG GD DRLDG+ + LVAVDLDGS A AIAAGE+H C L D S+K Sbjct: 37 SAKCW-----GNNRWGQLGRGDNTTLIGDEPDEMGDNLVAVPVG-GTVA-EVALGEDHTCMLLDSGNVVCFGKNDSGQLGLGDTSTRGQIAGDVGEA---ADLGAGLSAVAVALGCRHTCGLLDDGTVKCFGYNNYGQLGQGTTENMGDDAGEMGDDLPAVSLDG-TVSAVAAGCDHTCALMDDGTVMCWGRNTHGQLGTGDSDDRLDGNGLALVAVDLDGSVATAIAAGESHTCALLDDDSIK 269
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A6H5L2S4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2S4_9PHAE) HSP 1 Score: 264 bits (674), Expect = 2.750e-86 Identity = 136/219 (62.10%), Postives = 166/219 (75.80%), Query Frame = 1 Query: 73 VTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPLEGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVK 729 + GDDPDEMGD L+ V +G G VA +MALGE+H+C++LDSG CFG+ND GQLGLGDT RG++AG++G+A D G GLSA A+ +GC HTCGLL DG+VKCFGY G+TDN+GD+ G MGDDLPAV L+G + A+AAGCD TCA+++ G VMCWGRNT GQLG GD DRLDG ++LVAVDLDGS A AIAAGE+H C L D S+K Sbjct: 1 MVGDDPDEMGDNLVAVSVG-GTVA-EMALGEDHTCMLLDSGDVVCFGKNDSGQLGLGDTSTRGQIAGDVGEA---ADLGAGLSAVAVAAGCRHTCGLLDDGTVKCFGYTT------GTTDNMGDDAGEMGDDLPAVSLDG-TVSAVAAGCDHTCALMDDGTVMCWGRNTHGQLGTGDSDDRLDGSGLELVAVDLDGSVATAIAAGESHTCALLDDDSIK 207
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO) HSP 1 Score: 220 bits (561), Expect = 7.770e-66 Identity = 126/245 (51.43%), Postives = 156/245 (63.67%), Query Frame = 1 Query: 10 CWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729 CW G N GQLG GD + GDD EMG++L V LGTG A ++ G H+C +LD+G KC+G N+ GQLGLGDT RG GE+GD LP + GTG +ATAI+ G HTC LL +GSVKC+GYN YGQLG G T + GD G MGD LPA+ L G +A AI+ G TCA+L+ G++ CWG N +GQLG GD + R DG L A+ L G +AKAI+AG H C L + SVK Sbjct: 65 CW-----GANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLGDTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVK 304
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A4V5PJ66_9DELT (Uncharacterized protein n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4V5PJ66_9DELT) HSP 1 Score: 216 bits (549), Expect = 8.670e-64 Identity = 125/245 (51.02%), Postives = 150/245 (61.22%), Query Frame = 1 Query: 10 CWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDL-DGSSAKAIAAGETHVCVLNQDASVK 729 CW G N++GQLG GD GD P +MG L KVDLG G+ AV ++ + H+C ++ +G KC+G N +GQLGLGD E RG A E+GDALP VD G+G A AI +G SHTC LL G+VKC+G N GQLG G ++ GD G MGD LPA+ L G SA AIAAG CA+L GGA+ CWG N GQLG GD DR D L V+L G A AI AG H C L D +VK Sbjct: 103 CW-----GYNQFGQLGLGDTQTRGDMPGQMGSALPKVDLGPGQNAVAISAADNHACALISNGTVKCWGINSEGQLGLGDMESRGHAADEMGDALPNVDLGSGKIAIAIAAGYSHTCALLAGGAVKCWGSNYSGQLGLGDQEDRGDAPGEMGDALPAIDLGPGQSATAIAAGAAHVCALLAGGAIKCWGENHLGQLGLGDNNDRGDQPGEMGSALPTVNLGSGQKAAAITAGAYHNCALLMDGAVK 342
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A7Z9UFE8_9BACT (Big_5 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UFE8_9BACT) HSP 1 Score: 218 bits (554), Expect = 3.770e-63 Identity = 118/244 (48.36%), Postives = 155/244 (63.52%), Query Frame = 1 Query: 1 AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNVDLVAVDLDGSSAKAIAAGETHVCVLNQDASVK 729 + CW G+N GQLG G+ + GD+ EMGD L VDLGTG A +A G+ H+C +LD+ KC+G N GQLG+GDT RG + E+GD LP +D G+G +ATAIT+G HTC +L + S+KC+G N GQLG G T N GDE MGD LPAV L G +A I AG TC IL+ ++ CWG N GQLG G+ D L+ VD+ + G +AKAIAAGE+H CV+ ++++K Sbjct: 267 SVKCW-----GKNNLGQLGLGNTSNRGDNSSEMGDNLPVVDLGTGRTAKAIAAGDYHTCAILDNASIKCWGANASGQLGIGDTNNRGDESSEMGDILPAIDLGSGRTATAITAGNQHTCAILDNASIKCWGANASGQLGIGDTSNRGDESSEMGDTLPAVDLGSGRTAKVIVAGGSHTCTILDDSSIKCWGENDQGQLGLGNTTDSLNASVVDMGS----GITAKAIAAGESHTCVILNNSAIK 501
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A835T094_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T094_9CHLO) HSP 1 Score: 222 bits (565), Expect = 1.090e-62 Identity = 130/248 (52.42%), Postives = 157/248 (63.31%), Query Frame = 1 Query: 1 AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729 + CW G N++GQLG GD + GD P EMGD L V LGTG A ++ G H+C +LD+G KC+G ND G LGLGDT PRG GE+GD LP V GTG +ATAI +G HTC LL +GSVKC+G N+YG LG G T GD G MGD LPAV L G +A AI+AG +TCA+L+ G+V CWG N GQLG GD + R DG L AV+L G +A AI+AG H C L + SVK Sbjct: 1647 SVKCW-----GWNQFGQLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAISAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSPRGDGPGEMGDTLPAVALGTGRTATAIFAGVLHTCALLDNGSVKCWGCNDYGYLGLGDTSYRGDGPGEMGDTLPAVALGTGRTATAISAGSRYTCALLDNGSVKCWGWNDDGQLGLGDTSRRGDGPGEMGDTLPAVELGTGRTATAISAGGWHTCALLDNGSVK 1889
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A0K1EHP4_CHOCO (Uncharacterized protein n=2 Tax=Chondromyces crocatus TaxID=52 RepID=A0A0K1EHP4_CHOCO) HSP 1 Score: 214 bits (545), Expect = 3.290e-62 Identity = 127/245 (51.84%), Postives = 148/245 (60.41%), Query Frame = 1 Query: 10 CWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDNV---DLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729 CW G+N GQLG GD GD DEMGD L VDLGTG V +A G+ H+C +L G KC+G N GQLGLGDT PRG GE+GDALP V+ GTG +A AI G HTC LL DGSVKC+G+N G+LG G T GD G MGD L AV L G +A A++ G CA+L+ G+V CWG N GQLG GD R DG L AVDL G +A A+ AG H C L D S+K Sbjct: 214 CW-----GRNVQGQLGLGDTEPRGDAADEMGDALPAVDLGTGVTVVGLAAGDNHTCALLGGGSVKCWGANTSGQLGLGDTAPRGDGPGEMGDALPTVNLGTGRTALAIGGGDRHTCALLDDGSVKCWGFNTGGKLGLGDTAPRGDGPGEMGDALLAVDLGAGRTAAALSVGGSHACALLDDGSVKCWGGNGQGQLGLGDAEHRGDGAGEMGDALPAVDLGTGKTAVAVHAGHFHTCALLNDGSLK 453
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A382THL9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382THL9_9ZZZZ) HSP 1 Score: 203 bits (517), Expect = 1.250e-61 Identity = 122/235 (51.91%), Postives = 145/235 (61.70%), Query Frame = 1 Query: 46 GQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLD-----GDNVDLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729 GQLG+G RN GD P EMGD L VDLGTG+ A +A GE +C +L+ G KC+G N GQLG G + G GE+GD L VD GTG SATAI+ G C LL DG+VKC+G NN G+LGQG T+ +GD+ G MGD+L AV L G +A AIAAG + CA L G + CWG N GQLG G D GDN L AVDL G +A A++AG H C L D SVK Sbjct: 3 GQLGQGHRNSLGDGPGEMGDNLAAVDLGTGKTATAIATGEADTCALLNDGTVKCWGSNGYGQLGQGHSRSLGGDPGEMGDNLAAVDLGTGKSATAISGGTHFFCALLNDGTVKCWGRNNGGRLGQGHTNRIGDQDGEMGDNLAAVDLGTGKTATAIAAGNGYVCATLNDGTLKCWGENDLGQLGQGHANFLGDDPGEMGDN--LAAVDLGTGKTATALSAGYNHTCALLNDNSVK 235
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A848LHZ3_9DELT (Tandem-95 repeat protein n=3 Tax=Pyxidicoccus fallax TaxID=394095 RepID=A0A848LHZ3_9DELT) HSP 1 Score: 211 bits (538), Expect = 2.640e-61 Identity = 128/249 (51.41%), Postives = 151/249 (60.64%), Query Frame = 1 Query: 1 AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDM-ALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLDGDN---VDLVAVDLD-GSSAKAIAAGETHVCVLNQDASVK 729 A CW G N G LG GD G+ P EM D L VDLGTG A + A G ++C +LD KC+G N GQLGLGDT RG GE+GDALP VD G G +A A+TSG SHTC LL D SVKC+GYN +GQLG G T GD G MGD LP V L G +A AI AG TCA+L+ G++ CWG N +GQLG GD A R DG L V+L G +AKA++ GE + C L DA+VK Sbjct: 260 AVKCW-----GANSSGSLGLGDTARRGNGPGEMDDALSPVDLGTGRTARALTANGSGYTCALLDDASVKCWGDNSHGQLGLGDTRSRGDGPGEMGDALPPVDLGRGRTAKALTSGYSHTCALLDDDSVKCWGYNEFGQLGLGDTRIRGDGPGEMGDALPTVKLGAGRTARAIVAGGYSTCALLDDGSIQCWGYNEYGQLGLGDTAHRGDGPGEMEAALPRVNLGTGRTAKALSLGEFYTCALLDDATVK 503
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Match: A0A3M1N8Z3_9BACT (T9SS C-terminal target domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1N8Z3_9BACT) HSP 1 Score: 206 bits (524), Expect = 3.880e-61 Identity = 113/202 (55.94%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 46 GQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDMALGEEHSCVMLDSGGTKCFGQNDDGQLGLGDTEPRGRMAGELGDALPEVDFGTGLSATAITSGCSHTCGLLTDGSVKCFGYNNYGQLGQGSTDNVGDEMGHMGDDLPAVPL-EGASAVAIAAGCDFTCAILEGGAVMCWGRNTWGQLGAGDRADRLD-----GDNV 633 GQLG GD + GD P EMGD L VDLGTG +ALG HSC + D G KC+G+N GQLGLGD RG GE+GD LP VD GTG +ATAI +G S TC LL DGSVKC+G +YGQLGQG T + GD+ G MGD+LP + L G +A+AIAAG CA+L+ G+V CWG N +GQLG GD R D GDN+ Sbjct: 2 GQLGLGDTSDRGDAPGEMGDNLPAVDLGTGRTPTALALGNSHSCALFDDGAVKCWGKNRRGQLGLGDINDRGDAPGEMGDNLPTVDLGTGRTATAIAAGESFTCALLDDGSVKCWGEGDYGQLGQGDTAHRGDDPGEMGDNLPPIDLGAGRTAIAIAAGSFHACALLDDGSVKCWGANDYGQLGQGDTNYRGDDPGEMGDNL 203 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7458.17647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig7458.17647.1 >prot_M-pyrifera_M_contig7458.17647.1 ID=prot_M-pyrifera_M_contig7458.17647.1|Name=mRNA_M-pyrifera_M_contig7458.17647.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp AASCWRRVFSGQNKWGQLGRGDRNVTGDDPDEMGDKLIKVDLGTGEVAVDback to top mRNA from alignment at M-pyrifera_M_contig7458:9213..12509+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig7458.17647.1 ID=mRNA_M-pyrifera_M_contig7458.17647.1|Name=mRNA_M-pyrifera_M_contig7458.17647.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3297bp|location=Sequence derived from alignment at M-pyrifera_M_contig7458:9213..12509+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig7458:9213..12509+ >mRNA_M-pyrifera_M_contig7458.17647.1 ID=mRNA_M-pyrifera_M_contig7458.17647.1|Name=mRNA_M-pyrifera_M_contig7458.17647.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1470bp|location=Sequence derived from alignment at M-pyrifera_M_contig7458:9213..12509+ (Macrocystis pyrifera P11B4 male)back to top |