mRNA_M-pyrifera_M_contig74488.17631.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74488.17631.1
Unique NamemRNA_M-pyrifera_M_contig74488.17631.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: UPI001F03B7ED (bystin-like isoform X2 n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03B7ED)

HSP 1 Score: 87.0 bits (214), Expect = 5.390e-19
Identity = 41/51 (80.39%), Postives = 47/51 (92.16%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRFF+L+LLP VRDDIAE+ +LNYHLYQAL+KAL+KPAAF KGILLPL E
Sbjct:  239 AQRFFNLILLPRVRDDIAEYKRLNYHLYQALMKALFKPAAFFKGILLPLCE 289          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A147B723_9ACAR (Bystin like (Fragment) n=1 Tax=Carios mimon TaxID=360319 RepID=A0A147B723_9ACAR)

HSP 1 Score: 83.6 bits (205), Expect = 7.250e-19
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRFF+LVLLP VRDDIAE+ KLNYHLYQAL KAL+KP AF KG+LLPL +
Sbjct:   53 AQRFFNLVLLPRVRDDIAEYKKLNYHLYQALRKALFKPGAFFKGLLLPLCQ 103          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A1B6KBL6_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KBL6_9HEMI)

HSP 1 Score: 85.1 bits (209), Expect = 1.530e-18
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRF++LVLLP VRDDIAE+ +LNYHLYQAL KAL+KP AFMKGILLPL E
Sbjct:  106 AQRFYNLVLLPRVRDDIAEYKRLNYHLYQALRKALFKPGAFMKGILLPLCE 156          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A171AVL5_TRIIF (Bystin (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A171AVL5_TRIIF)

HSP 1 Score: 83.2 bits (204), Expect = 3.060e-18
Identity = 39/51 (76.47%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRF++LVLLP +RDDIAE+ +LN+HLYQAL KAL+KP AFMKGILLPL E
Sbjct:   44 AQRFYNLVLLPRIRDDIAEYKRLNFHLYQALRKALFKPGAFMKGILLPLCE 94          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A2P8YU11_BLAGE (Bystin n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8YU11_BLAGE)

HSP 1 Score: 84.3 bits (207), Expect = 3.250e-18
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRFF+LVLLP VRDDIAE+ +LN+HLYQAL KAL+KP AFMKGILLPL E
Sbjct:  176 AQRFFNLVLLPRVRDDIAEYKRLNFHLYQALRKALFKPGAFMKGILLPLLE 226          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A0L0DIL9_THETB (Bystin n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIL9_THETB)

HSP 1 Score: 84.7 bits (208), Expect = 4.240e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRFF+LVLLP VR+DI+EH KLN+HLYQAL KALYKPAAF KG LLPL E
Sbjct:  266 AQRFFNLVLLPCVREDISEHRKLNFHLYQALRKALYKPAAFYKGFLLPLLE 316          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A151I244_9HYME (Bystin n=2 Tax=Attini TaxID=143999 RepID=A0A151I244_9HYME)

HSP 1 Score: 84.7 bits (208), Expect = 5.420e-18
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRF++LVLLP +RDD+AE+ KLN+HLYQAL KALYKPA FMKGILLPL E
Sbjct:  236 AQRFYNLVLLPRIRDDLAEYKKLNFHLYQALRKALYKPAGFMKGILLPLLE 286          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A1B6EUR0_9HEMI (Uncharacterized protein n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6EUR0_9HEMI)

HSP 1 Score: 84.7 bits (208), Expect = 5.470e-18
Identity = 41/51 (80.39%), Postives = 45/51 (88.24%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRF++LVLLP VRDDI E+ KLNYHLYQAL KAL+KP AFMKGILLPL E
Sbjct:  230 AQRFYNLVLLPRVRDDIVEYKKLNYHLYQALRKALFKPGAFMKGILLPLCE 280          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A0A9Z1G7_LYGHE (Bystin n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z1G7_LYGHE)

HSP 1 Score: 84.7 bits (208), Expect = 5.530e-18
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRF++LVLLP VRDDIAE+ +LN+HLYQAL KALYKP AFMKG+LLPL E
Sbjct:  231 AQRFYNLVLLPRVRDDIAEYKRLNFHLYQALRKALYKPGAFMKGVLLPLCE 281          
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Match: A0A158NKZ3_ATTCE (Uncharacterized protein n=8 Tax=Myrmicinae TaxID=34695 RepID=A0A158NKZ3_ATTCE)

HSP 1 Score: 84.7 bits (208), Expect = 5.690e-18
Identity = 40/51 (78.43%), Postives = 46/51 (90.20%), Query Frame = 1
Query:    4 AQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPLAE 156
            AQRF++LVLLP +RDD+AE+ KLN+HLYQAL KALYKPA FMKGILLPL E
Sbjct:  236 AQRFYNLVLLPRIRDDLAEYKKLNFHLYQALRKALYKPAGFMKGILLPLLE 286          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74488.17631.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001F03B7ED5.390e-1980.39bystin-like isoform X2 n=1 Tax=Xenia sp. Carnegie-... [more]
A0A147B723_9ACAR7.250e-1978.43Bystin like (Fragment) n=1 Tax=Carios mimon TaxID=... [more]
A0A1B6KBL6_9HEMI1.530e-1880.39Uncharacterized protein (Fragment) n=2 Tax=Graphoc... [more]
A0A171AVL5_TRIIF3.060e-1876.47Bystin (Fragment) n=1 Tax=Triatoma infestans TaxID... [more]
A0A2P8YU11_BLAGE3.250e-1880.39Bystin n=1 Tax=Blattella germanica TaxID=6973 RepI... [more]
A0A0L0DIL9_THETB4.240e-1880.39Bystin n=1 Tax=Thecamonas trahens ATCC 50062 TaxID... [more]
A0A151I244_9HYME5.420e-1878.43Bystin n=2 Tax=Attini TaxID=143999 RepID=A0A151I24... [more]
A0A1B6EUR0_9HEMI5.470e-1880.39Uncharacterized protein n=3 Tax=Proconiini TaxID=5... [more]
A0A0A9Z1G7_LYGHE5.530e-1878.43Bystin n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0... [more]
A0A158NKZ3_ATTCE5.690e-1878.43Uncharacterized protein n=8 Tax=Myrmicinae TaxID=3... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74488contigM-pyrifera_M_contig74488:659..814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score84.7
Seed ortholog evalue1.4e-14
Seed eggNOG ortholog12957.ACEP18165-PA
Preferred namebys
KEGG koko:K14797
Hectar predicted targeting categoryno signal peptide or anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.Bystin
EggNOG OGs38DBE@33154,3BA8S@33208,3CR6R@33213,3SJXG@50557,41VS7@6656,46FES@7399,KOG3871@1,KOG3871@2759
COG Functional cat.W
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons1
Model size156
Cds size156
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816643.7589142-CDS-M-pyrifera_M_contig74488:658..8141622816643.7589142-CDS-M-pyrifera_M_contig74488:658..814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74488 659..814 +
1692278095.2856455-CDS-M-pyrifera_M_contig74488:658..8141692278095.2856455-CDS-M-pyrifera_M_contig74488:658..814Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74488 659..814 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74488.17631.1prot_M-pyrifera_M_contig74488.17631.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74488 659..814 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74488.17631.1

>prot_M-pyrifera_M_contig74488.17631.1 ID=prot_M-pyrifera_M_contig74488.17631.1|Name=mRNA_M-pyrifera_M_contig74488.17631.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
SAQRFFHLVLLPSVRDDIAEHHKLNYHLYQALLKALYKPAAFMKGILLPL
AE
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mRNA from alignment at M-pyrifera_M_contig74488:659..814+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74488.17631.1 ID=mRNA_M-pyrifera_M_contig74488.17631.1|Name=mRNA_M-pyrifera_M_contig74488.17631.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=156bp|location=Sequence derived from alignment at M-pyrifera_M_contig74488:659..814+ (Macrocystis pyrifera P11B4 male)
TCGGCGCAGCGATTCTTCCACCTGGTGCTGCTGCCTTCGGTGCGTGACGA CATTGCGGAGCACCACAAGCTGAACTACCACCTGTACCAGGCGTTGCTCA AGGCGCTGTACAAGCCAGCCGCGTTTATGAAGGGCATTTTGCTCCCTCTT GCCGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74488:659..814+

>mRNA_M-pyrifera_M_contig74488.17631.1 ID=mRNA_M-pyrifera_M_contig74488.17631.1|Name=mRNA_M-pyrifera_M_contig74488.17631.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=312bp|location=Sequence derived from alignment at M-pyrifera_M_contig74488:659..814+ (Macrocystis pyrifera P11B4 male)
TCGGCGCAGCGATTCTTCCACCTGGTGCTGCTGCCTTCGGTGCGTGACGA
CATTGCGGAGCACCACAAGCTGAACTACCACCTGTACCAGGCGTTGCTCA
AGGCGCTGTACAAGCCAGCCGCGTTTATGAAGGGCATTTTGCTCCCTCTT
GCCGAGTCGGCGCAGCGATTCTTCCACCTGGTGCTGCTGCCTTCGGTGCG
TGACGACATTGCGGAGCACCACAAGCTGAACTACCACCTGTACCAGGCGT
TGCTCAAGGCGCTGTACAAGCCAGCCGCGTTTATGAAGGGCATTTTGCTC
CCTCTTGCCGAG
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