mRNA_M-pyrifera_M_contig7448.17627.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7448.17627.1
Unique NamemRNA_M-pyrifera_M_contig7448.17627.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: D8LPZ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPZ2_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 1.660e-117
Identity = 176/256 (68.75%), Postives = 206/256 (80.47%), Query Frame = 1 
Query:    1 RPHLDEFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFKQDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWYRPL 768
            R HLDEFT MAESY+A R N PE L G D++FFVADF +NQ  FQ+LGLQ+VPKI+HFPP+LAEGD GRY  DQSQHM MAG+  AEDMARFVKE+TG S  I R EPPV IIL  LLV+A LAI+P+++NLGALLR ++NKYLWL  SL+VYTFGISGGVYDIIRNPA F  KQDG IMWFHPQ+NVQFVAEGFITG MTL+CG+ G+LLVH AP  ++ G R +A  + G +F+M F  V+ LYKSKN WYRP+
Sbjct:  103 RVHLDEFTTMAESYQAARANTPETLNGVDVYFFVADFGQNQLPFQKLGLQTVPKILHFPPALAEGDDGRYAIDQSQHMHMAGQVKAEDMARFVKEKTGVSFPIIRPEPPVMIILVGLLVVAALAIKPILSNLGALLRVIRNKYLWLATSLLVYTFGISGGVYDIIRNPAPFMVKQDGFIMWFHPQSNVQFVAEGFITGIMTLMCGLSGILLVHVAPKLRNSGYRQVAVCVCGVIFLMLFSKVMSLYKSKNMWYRPV 358
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A7S2UY50_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY50_9STRA)

HSP 1 Score: 164 bits (414), Expect = 3.650e-42
Identity = 94/249 (37.75%), Postives = 138/249 (55.42%), Query Frame = 1 
Query:   16 EFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFK-QDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWY 759
            E++V+A SY+A   NA    +    FF V D    + +FQ    Q VP++++ PP    G   +Y  D+ +      K +AED+A ++  +TG  + I R+     + L +L V A    RP++  L  ++  ++NK LWL +SL +YT  ISG +YDIIRNPA F    Q G I++FHPQAN QFV EGFI G + L C +  ++L  + P  K    R+ A G+    F+  F  V+ LY+SKN WY
Sbjct:   93 EYSVLASSYRAHVANA--GARNPPTFFTVVDVDGARATFQNYAFQQVPQLLYIPPY--SGQESKYVVDKKRAFGFTSKPTAEDLATWLHTQTGDRVHIVRSTTRAVLTLVLLAVGAACLARPIIHRLPTIINLLRNKMLWLLVSLGMYTCSISGMIYDIIRNPAPFFMNHQTGQIVFFHPQANSQFVVEGFIIGGLNLGCALSVIVLATYVPKIKHTQNRSTAIGICTMAFVCLFYTVMSLYRSKNKWY 337
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A7S3XXZ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXZ8_HETAK)

HSP 1 Score: 149 bits (375), Expect = 1.150e-36
Identity = 89/251 (35.46%), Postives = 132/251 (52.59%), Query Frame = 1 
Query:   10 LDEFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFK-QDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWY 759
            LD F   A SYKAT     + ++G +IFF   D    + +FQ+   ++VP++   PPS A      Y  D S   +      AE  ARFV+ + G    I R+     + L  LL   V A+RP++  +   LR V+ K +W+ + L +YT  ISG +YDIIRNP  +    Q G I +FHPQ+N QFVAEGFI GF+ +   +  +L+V      K    ++   G+  A+F++    ++ LY+ KN WY
Sbjct:   90 LDAFKEAAASYKAT---LGDTMRGDEIFFIAVDIDSAKNTFQRFQFKTVPQVFVIPPSTAGLPA--YTADPSASFLPDAHPEAEKFARFVERQLGVKFQIVRSNTRALMTLFALLGAMVAAVRPILNRIDFFLRLVRKKAIWMVVCLGLYTTSISGMIYDIIRNPPPYYMNHQTGQINFFHPQSNQQFVAEGFIIGFLNVGAAIALILMVTQMKRFKDPQNKSTFVGICYAVFVILLYTIISLYRVKNRWY 335
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A836CB15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB15_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.040e-36
Identity = 86/221 (38.91%), Postives = 126/221 (57.01%), Query Frame = 1 
Query:  100 VADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFK-QDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWY 759
            VAD   N++ FQ   LQSVP++ HF P  A G G  +   Q+  M +    +AED+A+FV ++TG   +I R++    + L  LL+  V A+R  + N+  +LR V++  LWL +SL+VYTF ISG ++DIIR+P  F    Q    ++F PQ N Q+V EGFI G + L    CG+++V  AP  K++  R        ALF + F   + +Y  KN WY
Sbjct:    2 VADVDLNRKVFQGYELQSVPQVAHFAPEAAPGAGAGWP--QADMMPVTKLFTAEDIAQFVGDKTGFRYTIYRSQFAARMALLALLLFLVGALRTAITNVALVLRVVRSPTLWLVVSLLVYTFSISGAIFDIIRSPPPFVISAQTRKPVYFSPQPNSQYVVEGFIVGILNLTTAFCGMVVVAIAPRIKARALRQTVTLAAAALFGLLFALSVTIYTWKNRWY 220
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A7S3XXY0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXY0_HETAK)

HSP 1 Score: 128 bits (321), Expect = 4.000e-29
Identity = 79/210 (37.62%), Postives = 113/210 (53.81%), Query Frame = 1 
Query:   10 LDEFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFK-QDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLV 636
            LD F   A SYKAT     + ++G +IFF   D    + +FQ+   ++VP++   PPS A      Y  D S   +      AE  ARFV+ + G    I R+     + L  LL   V A+RP++  +   LR V+ K +W+ + L +YT  ISG +YDIIRNP  +    Q G I +FHPQ+N QFVAEGFI GF+ +   +  +L+V
Sbjct:   90 LDAFKEAAASYKAT---LGDTMRGDEIFFIAVDIDSAKNTFQRFQFKTVPQVFVIPPSTAGLPA--YTADPSASFLPDAHPEAEKFARFVERQLGVKFQIVRSNTRALMTLFALLGAMVAAVRPILNRIDFFLRLVRKKAIWMVVCLGLYTTSISGMIYDIIRNPPPYYMNHQTGQINFFHPQSNQQFVAEGFIIGFLNVGAAIALILMV 294
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: M0ZPP1_SOLTU (Tumor suppressor candidate n=6 Tax=Solanum TaxID=4107 RepID=M0ZPP1_SOLTU)

HSP 1 Score: 86.7 bits (213), Expect = 7.940e-15
Identity = 64/237 (27.00%), Postives = 115/237 (48.52%), Query Frame = 1 
Query:   16 EFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLAVLAIRPLVANLGALLRTV-QNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFKQD--GTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARNLAAGLFGALFIMFF 717
            EF++++ S+     N P+      IFFF+ +F  ++ SF+   +QS+P I   P  + +      + D S   M      A+ M  FV+  +  ++    A P +   + +++    L   P +     +  T+ QNKY+W+  S++VY F +SG +Y IIR   +F   ++  G    F+  + +Q  AEGF  GF+  + G+   L+ H     K++G ++L   L   LF+ F+
Sbjct:   92 EFSLLSSSFLT---NNPQ--NNTQIFFFIIEFQESKSSFELFDVQSLPHIRLIPIYVTDVKTDCIKMDASGFSM-----GADSMKEFVEMNSNVNLGPIHAPPVIPKKMMMIIGAGFLIWSPFLVKKFVIGNTLLQNKYIWMVASILVYFFSVSGTMYTIIRKAPLFLIDRNDPGKYHIFYQGSGMQLGAEGFAVGFLYTIVGLLLALMTHILVHLKNRGTQSLLMAL--GLFVSFW 316
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A0D2X3F8_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X3F8_CAPO3)

HSP 1 Score: 84.3 bits (207), Expect = 4.430e-14
Identity = 80/251 (31.87%), Postives = 116/251 (46.22%), Query Frame = 1 
Query:   16 EFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAIILGVLLVLA-VLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFKQDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCG--VLLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWY 759
            EF V+A S+      +PE   G  ++F VA+F      F++L  QS+P IMHFP   A G     +T + Q + +     AE++ RFV ERTG S  I R   PV  +  VLL L  V+    L   L A ++  +N   W   ++ V     SG +++ IR P       +G  M+FHP +  QF  E  I   M L   + G  +LL   AP   +   R  A   F A+F+ F      +++ K   Y
Sbjct:   98 EFEVLASSWL----QSPEYQSG-QLYFAVAEFESASEVFEKLKTQSIPTIMHFP---AIGGPKPSDTYRMQQLGLE----AENVLRFVAERTGISFQIKR---PVDYMFYVLLTLGLVVGAAVLYKLLPAAVQFYRNPTYWAFAAVTVCFLFTSGQMWNQIRGPPYIAGNPNGPPMFFHPSSQSQFGVESHIV--MALYATIAGSFLLLNISAPFASTPILRRSAVYTFLAVFVFFLSVAFSIFRQKQRGY 331
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BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A2B4T0L4_STYPI (Magnesium transporter protein 1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4T0L4_STYPI)

HSP 1 Score: 83.6 bits (205), Expect = 3.590e-13
Identity = 77/253 (30.43%), Postives = 117/253 (46.25%), Query Frame = 1 
Query:   13 DEFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPV---AIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAM-FTFKQDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWY 759
            +EFT++A S++ ++Q + +      +FF V DF      F  L L S P  MHFPP         Y+  ++         SAE +AR+V ERT  +I + R  PP    A+I+G+L+VL    I  L+      L  + NK  W   +L V     SG +++ IR P       Q G + + H  +  QFVAE  I   +  L     +LL   A   K  G R +   +   L ++FF  +L +++SK   Y
Sbjct:  445 NEFTILANSWRYSQQYSNK------VFFAVVDFDEGPDVFTALRLNSAPMFMHFPPKGKPKKADTYDIQRTGF-------SAEQLARWVAERTDVNIRVFR--PPNYMGAVIMGLLVVL----IGGLLYVRRKNLEFLYNKTYWAIGALCVVFVMTSGQMWNHIRGPPYAHNNPQTGQVSYIHGSSQAQFVAETHIVILLNALYVAGMILLNEKAFEVKEIGKRKIVVMVGLGLVVLFFSLLLSVFRSKYHGY 678
[Close]
BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A2J6ME68_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6ME68_LACSA)

HSP 1 Score: 81.3 bits (199), Expect = 5.410e-13
Identity = 64/225 (28.44%), Postives = 115/225 (51.11%), Query Frame = 1 
Query:   16 EFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSS--AEDMARFVKERTGASISIARAEPPVAII-LGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFKQD--GTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARN 675
            EF ++++S+    +N+P AL  + +FF   +F  +Q SF Q G+ ++P I   PP     D    +TD     M AG  S  AE MA F++ RT   +      P ++   +G L+   ++++  L   L A    + +K +WL+ S+ +Y F +SG +++IIR   MF   ++    +++F+  + +Q  AEGF  GF+  + G+    + H     +S+ A+ 
Sbjct:   99 EFFLLSKSFGINNENSPSAL--SKLFFCDIEFGESQSSFAQFGVNALPHIRLLPP-----DATTLKTDSIS--MDAGDFSRLAESMAEFIESRTKLKMGQIHRPPILSKTQIGFLIAAFLISLPFLFKRLLAGETLLHDKRVWLSGSVFIYFFSVSGTMHNIIRKMPMFISDRNDPSKLVFFYQGSGMQLGAEGFAIGFLYTIVGLLLAFMTHVLVRVQSRIAQR 314
[Close]
BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Match: A0A118JXD0_CYNCS (Magnesium transporter protein 1 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A118JXD0_CYNCS)

HSP 1 Score: 80.9 bits (198), Expect = 7.120e-13
Identity = 60/223 (26.91%), Postives = 111/223 (49.78%), Query Frame = 1 
Query:   16 EFTVMAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFPPSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPPVAII-LGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISGGVYDIIRNPAMFTFKQD--GTIMWFHPQANVQFVAEGFITGFMTLLCGMCGVLLVHWAPTRKSQGARN 675
            EF ++++S+    Q++  AL  + +FF   +F  +Q SF Q G+ ++P I   PP  +         D      +A     E MA F++ RT  ++      P ++   LG L+V+ ++++  +   L A    + +K LWL+ S+ VY F +SG +++IIR   MF   ++    +++F+  + +Q  AEGF  GF+  + G+    + H     K+  A+ 
Sbjct:   97 EFFLLSKSFGINNQDSQSAL--SKLFFCDIEFGESQSSFAQFGVNALPHIRLLPPDASSLKSDSISMDAGDFSRLA-----ESMAEFIESRTKLTMGEIHRPPILSKTQLGFLIVVFLISLPFMFKKLLAGETLLHDKRLWLSGSVFVYFFSVSGTMHNIIRKMPMFISDRNDPSKMIFFYQGSGMQLGAEGFAIGFLYTIVGLLLAFVTHVLVRVKNSMAQR 312
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7448.17627.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPZ2_ECTSI1.660e-11768.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2UY50_9STRA3.650e-4237.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXZ8_HETAK1.150e-3635.46Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CB15_9STRA3.040e-3638.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XXY0_HETAK4.000e-2937.62Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M0ZPP1_SOLTU7.940e-1527.00Tumor suppressor candidate n=6 Tax=Solanum TaxID=4... [more]
A0A0D2X3F8_CAPO34.430e-1431.87Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
A0A2B4T0L4_STYPI3.590e-1330.43Magnesium transporter protein 1 n=2 Tax=Stylophora... [more]
A0A2J6ME68_LACSA5.410e-1328.44Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A118JXD0_CYNCS7.120e-1326.91Magnesium transporter protein 1 n=1 Tax=Cynara car... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7448contigM-pyrifera_M_contig7448:51..5639 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue1.1e-93
Seed eggNOG ortholog2880.D8LPZ2
Preferred nameOST3
KEGG koko:K12669,ko:K19478
KEGG TC9.A.45.1.1,9.A.45.1.2,9.A.45.1.3,9.A.45.1.4,9.A.45.1.6
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004576,GO:0004579,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005886,GO:0006464,GO:0006486,GO:0006487,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009507,GO:0009536,GO:0009856,GO:0009987,GO:0010483,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0022414,GO:0031224,GO:0031984,GO:0032501,GO:0032991,GO:0034645,GO:0035268,GO:0035269,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0051703,GO:0051704,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.protein N-linked glycosylation via asparagine
EggNOG OGsKOG2603@1,KOG2603@2759
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-15_001580.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000
Exons7
Model size1658
Cds size744
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816643.4930744-UTR-M-pyrifera_M_contig7448:50..771622816643.4930744-UTR-M-pyrifera_M_contig7448:50..77Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7448 51..77 +
1692278095.1041617-UTR-M-pyrifera_M_contig7448:50..771692278095.1041617-UTR-M-pyrifera_M_contig7448:50..77Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7448 51..77 +
1622816643.5939844-UTR-M-pyrifera_M_contig7448:4752..56391622816643.5939844-UTR-M-pyrifera_M_contig7448:4752..5639Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7448 4753..5639 +
1692278095.2049456-UTR-M-pyrifera_M_contig7448:4752..56391692278095.2049456-UTR-M-pyrifera_M_contig7448:4752..5639Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7448 4753..5639 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816643.5097332-CDS-M-pyrifera_M_contig7448:77..1881622816643.5097332-CDS-M-pyrifera_M_contig7448:77..188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 78..188 +
1692278095.118303-CDS-M-pyrifera_M_contig7448:77..1881692278095.118303-CDS-M-pyrifera_M_contig7448:77..188Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 78..188 +
1622816643.5222335-CDS-M-pyrifera_M_contig7448:1903..20791622816643.5222335-CDS-M-pyrifera_M_contig7448:1903..2079Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 1904..2079 +
1692278095.137232-CDS-M-pyrifera_M_contig7448:1903..20791692278095.137232-CDS-M-pyrifera_M_contig7448:1903..2079Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 1904..2079 +
1622816643.5331454-CDS-M-pyrifera_M_contig7448:2521..26041622816643.5331454-CDS-M-pyrifera_M_contig7448:2521..2604Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 2522..2604 +
1692278095.1468892-CDS-M-pyrifera_M_contig7448:2521..26041692278095.1468892-CDS-M-pyrifera_M_contig7448:2521..2604Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 2522..2604 +
1622816643.5439987-CDS-M-pyrifera_M_contig7448:3008..31661622816643.5439987-CDS-M-pyrifera_M_contig7448:3008..3166Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 3009..3166 +
1692278095.1568766-CDS-M-pyrifera_M_contig7448:3008..31661692278095.1568766-CDS-M-pyrifera_M_contig7448:3008..3166Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 3009..3166 +
1622816643.555013-CDS-M-pyrifera_M_contig7448:3771..38551622816643.555013-CDS-M-pyrifera_M_contig7448:3771..3855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 3772..3855 +
1692278095.168395-CDS-M-pyrifera_M_contig7448:3771..38551692278095.168395-CDS-M-pyrifera_M_contig7448:3771..3855Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 3772..3855 +
1622816643.5690467-CDS-M-pyrifera_M_contig7448:4109..41931622816643.5690467-CDS-M-pyrifera_M_contig7448:4109..4193Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 4110..4193 +
1692278095.1838892-CDS-M-pyrifera_M_contig7448:4109..41931692278095.1838892-CDS-M-pyrifera_M_contig7448:4109..4193Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 4110..4193 +
1622816643.5814695-CDS-M-pyrifera_M_contig7448:4704..47521622816643.5814695-CDS-M-pyrifera_M_contig7448:4704..4752Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 4705..4752 +
1692278095.1950445-CDS-M-pyrifera_M_contig7448:4704..47521692278095.1950445-CDS-M-pyrifera_M_contig7448:4704..4752Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7448 4705..4752 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7448.17627.1prot_M-pyrifera_M_contig7448.17627.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7448 78..4752 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7448.17627.1

>prot_M-pyrifera_M_contig7448.17627.1 ID=prot_M-pyrifera_M_contig7448.17627.1|Name=mRNA_M-pyrifera_M_contig7448.17627.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MAESYKATRQNAPEALKGADIFFFVADFARNQRSFQQLGLQSVPKIMHFP
PSLAEGDGGRYETDQSQHMMMAGKSSAEDMARFVKERTGASISIARAEPP
VAIILGVLLVLAVLAIRPLVANLGALLRTVQNKYLWLTISLMVYTFGISG
GVYDIIRNPAMFTFKQDGTIMWFHPQANVQFVAEGFITGFMTLLCGMCGV
LLVHWAPTRKSQGARNLAAGLFGALFIMFFINVLKLYKSKNPWYRPL*
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mRNA from alignment at M-pyrifera_M_contig7448:51..5639+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7448.17627.1 ID=mRNA_M-pyrifera_M_contig7448.17627.1|Name=mRNA_M-pyrifera_M_contig7448.17627.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5589bp|location=Sequence derived from alignment at M-pyrifera_M_contig7448:51..5639+ (Macrocystis pyrifera P11B4 male)
AGGCCTCACCTTGACGAGTTCACGGTCATGGCGGAGTCCTACAAGGCGAC
GAGACAGAACGCACCGGAGGCGCTGAAAGGGGCTGACATTTTCTTCTTCG
TGGCGGACTTCGCCCGTAACCAGAGGTCTTTCCAGCAGGTACGCCGTGAC
ACAATACCGGATGGGGCGTGATTTTTATTACGGCTGTGCTATAGGTCGGT
CGTGATCCCTGACCGAGGTTTCTGTCTACGATGGCCTGCATGCGGCGTGG
GCAATGGCGGCCGCTGCTAGTTGAAGCGGAGTTGCGCTGACGCGCTCGTT
CTTGCCGACAACATGGGGGGGGTATTGCCGTATCACACTAGGGTGGTAAG
ATAACACACCCTGTGGGACAATTTTTAGAGCCGAGATTGTCTAGACCCAT
GGGGGCACACACACAAGGCACAACCAGAAGGTGCTGGCTCTGGAAACATC
TCCTCGAGATATTTCCGTGGACGCATCGCTCGTCGTACCCAGTACGCCCT
CCCCGCTGTCCAGAAAAACAGCTTCGAAATTCGCCCGACGGGGGTGTGGT
GTCTTGTCACACGGTGTGATACGGTAGCACGAAGAACCTGCGCACGAAGA
ACTTCGATTGGGGGGCACTCCTCTCGCACGCGGCGCGGTGGAGAGGTGAC
GTCGCCCCACAGCGTTGAGTCGAGGTTGACCACGAGCCGTGCATGTGATG
AGGCTTGTATGCCCCCCCCTCCCCACCGGTCTTGGTGTCGTCGCAAGATG
GTCCAAACGGCGCGATGATGGAGAGCTGTCTTGAAACTCGTCAGTAGTTC
GGTTGTCGTACAACGCCGCAGGCTTTGGCTGAAACGCGCAGCTTCGGTAC
CGGCAGGTGGGGAACGGGGCGAGCACACGTCGTCCAGGCGGCACCAGCCT
TTGTTCCGACGTATTTGTTGTTTTCGTCCGCCCTGGGGGTATACTCTCCT
CGCTTTTAGCGAATAAGTAGTGTCACGGTGTTTAAGGGACAGCCATATTC
CCTTTTTTGTCAGAGGAATGCCGATGTACCGGCCGCGCCCGAAAAACGCC
TCTTGTTGCTGTTTGTCCTAGCCTTCCAGGATTTTTTTTTTTTTTTTTTG
GGTAGGGGGTATATAGGTGTGTGCGCAACGTAGTCTCCAGACTCTCGTTG
AGCCTCCTGGACCGATCAAATAATACAGTGATGTATACCTGGCATGTTTT
CCCTGGCGTTGTCTTCGGCACGATGGTGAGTTGACGACGCGGCACTTCAA
CCCTCAGCCCTCCTTCAGCAACGCGAAAACACCAGGCTCTCCTCTCGTCC
TAAGTTCACCGTGTTTTCTTCCTCCCACCTCGTAGATAGCAGCGCCAAGC
ACGGTCCAGCTGGATCCTTGGTGCCTGCTTGTTTTATGGGTACGTATCGG
TCGCTGCTTCGCGTGGTATTCATACCGACGTGCGTCTCGCATGCTCCAAT
TCGCGGACGCGACCCGGAGGAAAACAGACCAGGAGCTAACAGTACCGCTT
TCTTGTTTCGGGCGCATGGCGTGCTTCAGTTGTGACGTGTGTCGTACTGT
TTGTACGGTGTTATACTGCTTTGTACTGTTTTGTACTGTTTTGTGCTGTT
TAATACTGTCTTGTACTGTTTTGTGCTGTTTTGTGCTGTTTTGTACTGTT
TTGTACTGTTTTGTACCGGTGTTATATTTATTTCATTTTTTTCTGAGGTA
TTCGTCCACTCACATGGTTTCTCGGAGCCCGTCCTGTGACCACCGAGTAG
TGTTTTGGCGATGCGTTAATGTGAGAACAACAGCAACAACAACAGCAACG
GTATCTTGCGAAACCGCGCCGCGTCGCGTGCCGCGAAACCCTATCCCTGA
CAGTTGGGCTTGCAGTCGGTCCCGAAGATCATGCACTTCCCCCCGTCCCT
GGCGGAAGGGGATGGGGGCCGCTACGAGACGGACCAGTCTCAGCACATGA
TGATGGCCGGCAAGTCCTCCGCCGAGGATATGGCACGGTTCGTAAAGGAA
AGGACGGGAGCGTCGATCTCGATAGCGAGGTGGGTCTCGACGGCGGGTGT
AGCATTCCAGGTATGGTGCCAGGGACTAGGTAGATGCGGTATGAGCCTGG
ATTTCCTATACACGGATGGCGAGGGGGGGGGCGGGGGCGGGGGTGGGAGC
GGGCCGGGCCGGGGCGAAGCGGAGCAGAGGATACTGCGTGAGTTGTAGTG
GTGTTGGCCGTTAGCAAAAAGTGTGTCGGAGCTAGGCACAGGAAGGTGAT
TTCTGGGCTGCGTGCAAGCGTCTGCAAGCGTCTGCGCGCACACGCAGCGG
ACGCTGTGAGTTGTGCCTTTTGCGTGCTCGTGCTCTGCGCCTGCTCGTCG
AAGCTGGTGCTTCCCCCTCCCTTCTTTCGATAACATGCCGTTCGCCTCTC
GAGTCTGACTCGCATGCGGCAACGCCGTGTGCTCTGTTGATGTGCCCGTG
CCCGCGTCGTGGCGTGATCAGGGCCGAGCCCCCGGTGGCGATAATTCTGG
GCGTGCTGCTGGTGCTTGCTGTCCTGGCCATCAGGCCGCTGGTCGCTAAC
CTAGGTGAGACGACAGCACGCACAGCGCGACCGGTGCCCTGTTTGCAGCG
CTGTTGCGCGGCGATCATTTGCTGGTGTCATCGCGGCATCGTTTCCCTGG
CAAGAGAGGCGACCCCCCCCCCCCCGCCCCCTGGAGTTGCCGTGGCTGCT
ACGAATGCACGATTGATACAGCCAAGACACCGCCTTTTTTCGAGCCGCCG
TTTTGGCGGAGGCGGTAGATGGTGGCTGTTACAGCAGTGGCTGCGTCAGG
CGCAGTTGGCCCGCCGACCTCCTACATACCCCCGAAATACTGAGAGACCG
GCAGTCGCGGTACACACTGTGGTGCTTGCGGATTTTCGTTAGCACTGAAT
GCTGAACGCCCCTTCTCCCCACGAAACAACCTTTGGCCGGCCTTATTGGT
TTCGGCAGGCGCTCTCCTTCGAACCGTCCAAAACAAGTACTTGTGGCTCA
CGATCTCTCTGATGGTGTACACGTTCGGCATCAGCGGGGGCGTGTACGAC
ATCATCCGCAACCCCGCGATGTTCACCTTCAAGCAGGACGGGACAATCAT
GTGGTTCCACCCACAGGTGCGCGCGAGCCTTTGGTCGCAACAGCGTGTAC
GTTGTGGCTCCCACCCGCCCTTCTCATCCATTTCCCTCAAGGACGGGTTT
CGACGAGAAGCTGTAACTGGTTTGTCGGGCGACGGGACCGAGGACTGAAG
GGTGTTTTGTTTTGTTTGTTTCGCTCTTTTCGAGAGTCTGGGGCTTTGCT
TGCCCGTTGCTGAGGGTCATGGTTCAGTGAGGCCTCCGCTGCGGGCGATG
TCGCTCGACTGCGGCAATCGTCAAGGCTACGGTGTGGAGAGTTTTGGTCG
ATCCTTTTCGAATTCTATGTGGATGGGCGATTCAACAGGAGCTCAACCAA
TCCGCTTTGAAGTACATGAGGGCTTGCTGGGGTTGGCTGGGTGTGGGTGG
GGGGACGTGCTGTATCCATCTGCTGGGGGGGGTTTTCCCGGGTTCGCTGT
CCGCGTGGTTGCACGCTCACCACTTTGGTCGCCGTGTTCACGGCGGAAGC
ACACCAGTGGGGACGCCGTTGAGAGTGGCCTCCTTCCGTGCCCGCCCAAG
CGAGCTGTGCCGACACTGTCAGCCCTCTCCCCCGCCCCACCCCCTTTCGT
CTTTTTCTCGACGTTGTCAAGGCTAACGTGCAGTTTGTTGCGGAGGGCTT
CATCACCGGATTCATGACTCTTCTGTGCGGGATGTGCGGCGTCTTGCTCG
TTCATGTGAGCCATCCCTTGGTTCTTCCTCGGGTTTTGCCTAAGCCTGCC
GCTTGTTCTGCGGTTTCACTGTTCGCGGCCCGCCCACGCGACAGGCTGTT
CGTGGTCACCCCCCCCTGCCCGCACATGACACCCGTGCGCGTGGCCCCTG
CGTGAACCCCACACGATTGTGGCCCCTGAACCGCTGGTGTGCACGTGCCC
GCCTGCCTGCGCCTTTCCTTGCCGCATCGTGTTCCTGGGGTGTCTTGACT
TGTTCGCAGTGGGCTCCGACGAGGAAGTCCCAAGGAGCTAGAAACTTGGC
GGCCGGATTGTTTGGAGCTCTCTTCATCATGTTCTTTATCAATGTGAGAT
TTTTTTTCGCTGACGTAGGTCACGAGATGGATGCACCCGGTCATCAGATG
ATACAGCTGTATACCCCCAAGTAGAGGAGCCACTCATCAATTCCCCTCTG
GGCGATGTTTTTCTCGCGGGGAAAACGACTTGCGTTATATTCGTTCCAGC
AATGGTCGTGGTTGGCTTCGTACCGGCTGCTGAAATTATGTCCCCCGCGT
TTCGGGAACGAAGTACTTGAAGCGTACGCACGTAGTGAAAGGCGTTGGTG
TTGCCCCAGTTTCTTCGATGGTGCCGCGCGTGTCGGCGGGGGCGCTCGCG
TGCCGGTCGATGTTTGGGGACGGAAGAGTGGCGGTGGCTTCTTCCCCGCT
GCTGTAGAACATCTCTGCGACACACAGCCGCTTATGAGCACCGTTCGAGC
CGATGGCGGCGCTCTTTACTGTGTATGGGCCTGATGCCCACGCGGCGGTG
ACGTCCCCACCTCCCTGGTTGCTGCGTTTCTTCTTTTTGTTTGTTCCTGC
GAAGGTCCTGAAGCTGTACAAGTCGAAGAACCCCTGGTACCGCCCCCTTT
AGAGCGAAGAAGCTGCTATGTCGGGGAGCTCTTGCAGAAGCCTTCTGCGG
CAAGTCCTGGAGCTTGGCGCGGGTGGAACCTGCTGCATACGTGCTTGGGA
ACAGTCGAGGCAGTTGCAACCGGGGTTTGTCAAACGGTCGGCTTTGCTAT
GGGTCGGGGCGGCTTGGTTGCGAATCGGGATTTGCATAGTACTGTACGAG
TTAGCGTGTTGCCACTCTACTCGCGCGTTTCGGAGGGTACAACGAGTAGG
CGTGTTTTTTTTTTAATGCACCGGTTAGACGGAAGAGCAGCGGCACGGAA
ATACCTCTAGGGTTAGATGGAAGAGCAGAGCTCAGCGGCACCGGAAGGCA
TCTAGGGCAAAGATGAAGAGCTTTGCTCGCGTGCTTGTGCTTGATCATAG
TCCTTGCGCTCGGGCGTGTTGTAGTGGTCGCCGTACGTTGTTCTCTTCGT
AGGATTTTGGATGGCGAGCAGAATATTCGACCGGCTTCATGTACGATCGG
TTCTTTGGTGCGGTGATGCGCCGAAGAAACACAAGGTATTGGAGGGACGG
TTGAACGTGTTAAAAGGCTCCAGCATTTTCAGGGTTGGCTCTCGGCGAAG
TGGTGGCGGAGACTGGACGCAGGTTGCTCTCCGTGTGACTATTTAAGATC
GTCTTGAGCTAAGGTAGTCGGCGTAAGCGAGTGAGAGACAACCAGGAACG
TATACTCGTGGCATGGTGGTCCTGTCATGGTGACCCGTGGCAGTGGAAAT
TGCCGGGATCAATGAAAATAAAGTAAAGGCGGTGGCGGAGCAATGCGTAT
GTTTTCCGTCCTCTCGACAACAACGTGCGTCGCGATGTTTTCTTGGCTCT
CTTGCGTTGGTAACAATGAACTCCCAAGTTTTGCTTGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7448:51..5639+

>mRNA_M-pyrifera_M_contig7448.17627.1 ID=mRNA_M-pyrifera_M_contig7448.17627.1|Name=mRNA_M-pyrifera_M_contig7448.17627.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig7448:51..5639+ (Macrocystis pyrifera P11B4 male)
ATGGCGGAGTCCTACAAGGCGACGAGACAGAACGCACCGGAGGCGCTGAA
AGGGGCTGACATTTTCTTCTTCGTGGCGGACTTCGCCCGTAACCAGAGGT
CTTTCCAGCAGATGGCGGAGTCCTACAAGGCGACGAGACAGAACGCACCG
GAGGCGCTGAAAGGGGCTGACATTTTCTTCTTCGTGGCGGACTTCGCCCG
TAACCAGAGGTCTTTCCAGCAGTTGGGCTTGCAGTCGGTCCCGAAGATCA
TGCACTTCCCCCCGTCCCTGGCGGAAGGGGATGGGGGCCGCTACGAGACG
GACCAGTCTCAGCACATGATGATGGCCGGCAAGTCCTCCGCCGAGGATAT
GGCACGGTTCGTAAAGGAAAGGACGGGAGCGTCGATCTCGATAGCGAGTT
GGGCTTGCAGTCGGTCCCGAAGATCATGCACTTCCCCCCGTCCCTGGCGG
AAGGGGATGGGGGCCGCTACGAGACGGACCAGTCTCAGCACATGATGATG
GCCGGCAAGTCCTCCGCCGAGGATATGGCACGGTTCGTAAAGGAAAGGAC
GGGAGCGTCGATCTCGATAGCGAGGGCCGAGCCCCCGGTGGCGATAATTC
TGGGCGTGCTGCTGGTGCTTGCTGTCCTGGCCATCAGGCCGCTGGTCGCT
AACCTAGGGCCGAGCCCCCGGTGGCGATAATTCTGGGCGTGCTGCTGGTG
CTTGCTGTCCTGGCCATCAGGCCGCTGGTCGCTAACCTAGGCGCTCTCCT
TCGAACCGTCCAAAACAAGTACTTGTGGCTCACGATCTCTCTGATGGTGT
ACACGTTCGGCATCAGCGGGGGCGTGTACGACATCATCCGCAACCCCGCG
ATGTTCACCTTCAAGCAGGACGGGACAATCATGTGGTTCCACCCACAGGC
GCTCTCCTTCGAACCGTCCAAAACAAGTACTTGTGGCTCACGATCTCTCT
GATGGTGTACACGTTCGGCATCAGCGGGGGCGTGTACGACATCATCCGCA
ACCCCGCGATGTTCACCTTCAAGCAGGACGGGACAATCATGTGGTTCCAC
CCACAGGCTAACGTGCAGTTTGTTGCGGAGGGCTTCATCACCGGATTCAT
GACTCTTCTGTGCGGGATGTGCGGCGTCTTGCTCGTTCATGCTAACGTGC
AGTTTGTTGCGGAGGGCTTCATCACCGGATTCATGACTCTTCTGTGCGGG
ATGTGCGGCGTCTTGCTCGTTCATTGGGCTCCGACGAGGAAGTCCCAAGG
AGCTAGAAACTTGGCGGCCGGATTGTTTGGAGCTCTCTTCATCATGTTCT
TTATCAATTGGGCTCCGACGAGGAAGTCCCAAGGAGCTAGAAACTTGGCG
GCCGGATTGTTTGGAGCTCTCTTCATCATGTTCTTTATCAATGTCCTGAA
GCTGTACAAGTCGAAGAACCCCTGGTACCGCCCCCTTTAGGTCCTGAAGC
TGTACAAGTCGAAGAACCCCTGGTACCGCCCCCTTTAG
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