mRNA_M-pyrifera_M_contig74425.17619.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig74425.17619.1
Unique NamemRNA_M-pyrifera_M_contig74425.17619.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A7S2KGK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KGK3_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.090e-94
Identity = 168/360 (46.67%), Postives = 235/360 (65.28%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGA-KSWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGV---ASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LGV  +LP L+AV  + KSWQARHTG K+VQQ A+L+   VLP L ELV++++  L D  +KVR++AAL   ALAEA+ P+GIESFD V++ + K   +   +G      LAAFL A G ++PLME  +A  +   ++P    +  SPDEE++R VL+V++QCVG  GV  E +R E+LP  F  FW+RR ALDRR   +++ TT  L  K+G S +LSR+  DLKD+SEPYRR+V+  + +VLE  G+GD+ E LEE L+DG + AF+EQ V   A +A + +G            +L+G   V++ALG R KPYL QI    + RL ++AAS+R+QAA L+ R+A ++K C E
Sbjct:   60 VVASALGVPSLLPFLKAVCRSRKSWQARHTGIKIVQQIAVLMGCAVLPYLRELVEIVSNGLTDEQAKVRTMAALTVAALAEAAHPYGIESFDSVIRALWKGALEHHGKG------LAAFLKAIGFIIPLMEENYASHYTRLVMPILTREFHSPDEEMKRIVLKVVKQCVGTAGVEPEYIRKEILPEFFRNFWIRRMALDRRNYSQVIETTEELANKVGCSDILSRIVEDLKDDSEPYRRMVMETIQKVLENLGSGDIDERLEERLIDGILYAFQEQAVDAGADSAFKREGQI----------MLEGFGTVVNALGERCKPYLKQIAGTIKWRLNNKAASVRMQAADLIGRIAVVMKACGE 403          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A835R3I1_VANPL (Uncharacterized protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835R3I1_VANPL)

HSP 1 Score: 290 bits (741), Expect = 2.380e-91
Identity = 162/357 (45.38%), Postives = 231/357 (64.71%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAK-SWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K SWQARHTG K+VQQ A+L+   VLP L  LV++I   L D + KVR+I AL+  ALAEA+AP+GIESFD VLKP+ K +     RG    + LAAFL A   ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV ++ +RN++LP  F +FWVRR ALDRR   +L+ TT  +  K+G + ++ R+  DLKDESEPYRR+V+  + +V+   GA D+   LEELL+DG   AF+EQ                 S  A  +L+G  AV++ALG RVKPYL QI    + RL +++A +R QAA L+ R+A ++K C E
Sbjct:   26 VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLVEIIGHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSH--RG----KVLAAFLKAIAFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVESDYIRNDILPEFFRSFWVRRMALDRRNYKQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGIRYAFQEQ----------------TSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRMAVVMKHCHE 360          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A6J5Y913_PRUAR (SF3b1 domain-containing protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A6J5Y913_PRUAR)

HSP 1 Score: 294 bits (752), Expect = 5.370e-91
Identity = 163/357 (45.66%), Postives = 233/357 (65.27%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAK-SWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K SWQARHTG K+VQQ A+L+   VLP L  LV++I   L D + KVR+I AL+  ALAEASAP+GIESFD VLKP+ K +     RG    + LAAFL A G ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV  E +R+++LP  F  FWVRR ALDRR   +L+ TT  +  K+G + ++ R+  DLKDESEPYRR+V+  + +V+   GA D+   LEELL+DG + AF+EQ                 S  A  +L+G  AV+++LG RVKPYL QI    + RL +++A +R QAA L+ R+A ++K+C+E
Sbjct:  229 VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIENGLSDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSH--RG----KVLAAFLKAIGFIIPLMDAMYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPEFFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVVNLGASDIDARLEELLIDGILYAFQEQ----------------TSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQE 563          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A6J5VL48_PRUAR (SF3b1 domain-containing protein n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5VL48_PRUAR)

HSP 1 Score: 294 bits (752), Expect = 5.510e-91
Identity = 163/357 (45.66%), Postives = 233/357 (65.27%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAK-SWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K SWQARHTG K+VQQ A+L+   VLP L  LV++I   L D + KVR+I AL+  ALAEASAP+GIESFD VLKP+ K +     RG    + LAAFL A G ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV  E +R+++LP  F  FWVRR ALDRR   +L+ TT  +  K+G + ++ R+  DLKDESEPYRR+V+  + +V+   GA D+   LEELL+DG + AF+EQ                 S  A  +L+G  AV+++LG RVKPYL QI    + RL +++A +R QAA L+ R+A ++K+C+E
Sbjct:  202 VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIENGLSDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSH--RG----KVLAAFLKAIGFIIPLMDAMYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEPEYIRSDILPEFFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVVNLGASDIDARLEELLIDGILYAFQEQ----------------TSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQE 536          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A7S2EPV0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EPV0_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.940e-90
Identity = 171/358 (47.77%), Postives = 233/358 (65.08%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGA-KSWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEV-LDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LGV  +LP L+AV  + KSWQARHTG K+VQQ ALL+   VLP L ELV++++  L D   KVR+I AL   ALAEA+ P+GIESFD V++P+ K   +   +G      LAAFL A G ++PLME  +A  +   ++P  L +  SPDEE+++ VL+V++QCV   GV  + +R E+LP  F  FW+RR ALDRR   +++ TT  L  K+G S VL R+  DLKD+SEPYRR+V+  V +VLE  G+GD+ E LEE L+DG + AF+EQ V      D   T + A     +V LDG   V++ALG R KPYL QI+   + RL ++AAS+R+QAA L+ R+A ++K C E
Sbjct:  648 VVASALGVPALLPFLKAVCQSRKSWQARHTGIKIVQQVALLMGCAVLPYLRELVEIVSHGLTDEQQKVRTITALTVAALAEAAYPYGIESFDSVIRPLWKGAMEHHGKG------LAAFLKAIGFVIPLMEEEYASHYTRLVMPILLREFHSPDEEMKKIVLKVIKQCVATAGVEPDYIRKEILPEFFRNFWIRRMALDRRNHRQVVETTEELANKVGCSDVLGRIIDDLKDDSEPYRRMVMETVQKVLENLGSGDIDERLEERLIDGILYAFQEQAV------DASTTGTNAFGKEGQVMLDGFGTVVNALGERCKPYLKQIVGTIKWRLNNKAASVRMQAADLIGRIAVVMKACGE 993          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A835Q468_VANPL (TOG domain-containing protein n=5 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q468_VANPL)

HSP 1 Score: 289 bits (740), Expect = 4.250e-90
Identity = 160/357 (44.82%), Postives = 232/357 (64.99%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAKS-WQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K  WQARHTG K+VQQ A+L+   VLP L  LV++I   L D + KVR+I AL+  ALA+A+AP+G+ESFD VLKP+ K +     RG    + LAAFL A G ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV ++ +RN++LP  F  FWVRR ALDRR   +L+ TT  +  K+G + ++ R+  DLKDESEPYRR+V+  + +V+   GA D+   LEELL+DG + AF+EQ                 S  A  +L+G  AV++ALG RVKPYL QI    + RL +++A +R QAA L+ R+A ++K+C E
Sbjct:   26 VVASALGIPALLPFLKAVCQSKKFWQARHTGIKIVQQIAILMGFAVLPHLRSLVEIIEHGLSDENQKVRTITALSLAALAKAAAPYGVESFDSVLKPLWKGIRSH--RG----KVLAAFLKAIGFIIPLMDALYASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVESDYIRNDILPEFFRNFWVRRMALDRRNYNQLVDTTVEIANKVGVADIVGRVVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQ----------------TSDDANVMLNGFGAVVNALGQRVKPYLPQIRGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCHE 360          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A4S4CXY7_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4CXY7_CAMSI)

HSP 1 Score: 293 bits (750), Expect = 7.270e-90
Identity = 164/357 (45.94%), Postives = 231/357 (64.71%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAK-SWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K SWQARHTG K+VQQ A+L+   VLP L  LV++I   L D + KVR+I AL+  ALAEASAP+GIESFD VLKP+ K +     RG    + LAAF  A G ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV AE +R E+LP  F  FWVRR ALDRR   +L+ TT  +  K+G + ++ R+  DLKDESEPYRR+V+  + +V+   GA D+   L+ELL+DG + AF+EQ                 S  A  +L+G  AV++ALG RVKPYL QI    + RL +++A +R QAA L+ R+A ++K C+E
Sbjct:  137 VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSH--RG----KVLAAFRKAIGFIIPLMDAIYASYYTKEVMIILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAEYIRTEILPEFFRNFWVRRMALDRRNHWQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVANLGASDIDARLQELLIDGILYAFQEQ----------------TSNDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKRCQE 471          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A7S1Y9D5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9D5_9STRA)

HSP 1 Score: 288 bits (738), Expect = 1.360e-89
Identity = 164/357 (45.94%), Postives = 229/357 (64.15%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGA-KSWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LGV  +LP L+AV  + KSWQARHTG K+VQQ ALL+   +LP L ELV++++  L D   KVR + AL   ALAEA+ P+G+ESFD V++P+ K   +     G   + LAAFL A G ++PLME  +A  +   I+P  L +  SPDEE++R VL+V++QCV   GV    +R ++LP  F+ FW+RR  LDRR   +++ TT  L  K+G S +L R+  DLKD+SEPYRR+V+  +H+VL   GA D+ E LEE L+DG + AF+EQ      L+    TAS     ++ +LDG   V++ALG R KPYL QI    + RL ++AA +R+QAA L+ R+A ++K C E
Sbjct:  137 VVASALGVPSLLPFLKAVCQSRKSWQARHTGIKIVQQIALLIGPAILPYLYELVEIVSGGLTDDMQKVRIMTALTMAALAEAAYPYGVESFDSVIRPLWKGALEH--HHG---KALAAFLKAIGFVIPLMEENYASHYTRLIMPILLREFHSPDEEMKRIVLKVIQQCVATAGVEPNYIRQDILPEFFKNFWIRRMGLDRRNYTQVVETTEELANKVGVSDILERIVDDLKDDSEPYRRMVMETIHKVLTNLGAADLDERLEERLMDGILYAFQEQ-----PLDLGTGTASNTPRESQVMLDGFGTVVNALGERCKPYLKQIAGTIKWRLNNKAAPVRMQAADLIGRIAVVMKACGE 483          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A164YJX2_DAUCS (TOG domain-containing protein n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164YJX2_DAUCS)

HSP 1 Score: 296 bits (758), Expect = 2.270e-89
Identity = 166/357 (46.50%), Postives = 235/357 (65.83%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAK-SWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K SWQARHTG K+VQQ A+L+   VLP L   V ++   L D + KVR+I AL+  ALAEASAP+GIESFD VLKP+ K +     RG    + LAAFL A G ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV A+ +R+E+LP  F  FWVRR ALDRR   +L+ TTA LG K+G + ++ R+  DLKDESEPYR +V+  + +VL E GA D+ + LEELL+DG + AF+EQ  A A +                +L+G +AV+++LG RVKPYL QI    + RL + +A +R  AA L+ RVA ++K+C+E
Sbjct:  314 VVASALGIPSILPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSFVGIVEHGLNDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSH--RG----KVLAAFLKAIGFIIPLMDAVYASYYTKEVMIILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSEILPEFFRNFWVRRMALDRRNYKQLVETTAQLGNKVGVADIVGRIMEDLKDESEPYREMVMETIEKVLAELGASDIDDRLEELLIDGTLYAFQEQTGADAHV----------------MLNGFSAVVNSLGKRVKPYLPQICGTIKWRLNNNSAKVRQHAADLITRVAVVMKQCQE 648          
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Match: A0A453NAN5_AEGTS (TOG domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453NAN5_AEGTS)

HSP 1 Score: 293 bits (750), Expect = 5.400e-89
Identity = 162/357 (45.38%), Postives = 235/357 (65.83%), Query Frame = 1
Query:    1 VVAQTLGVEPMLPLLRAVAGAK-SWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPALEDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGLSPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTVLRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTAALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDLEELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSALGVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE 1068
            VVA  LG+  +LP L+AV  +K SWQARHTG K+VQQ A+L+   VLP L  LV++I   L D + KVR+I AL+  ALAEA+AP+GIESFD VLKP+ K +     RG    + LAAFL A G ++PLM+  +A ++  +++   + +  SPDEE+++ VL+V++QCV  EGV A+ +R+++LP  F+ FWVRR ALDRR   +L+ TT  +  K+G + ++ ++  DLKDESEPYRR+V+  + +V+   GA D+   LEELL+DG + AF+EQ                 S  A  +L+G  AV++ALG RVKPYL QI    + RL +++A +R QAA L+ R+A ++K+C+E
Sbjct:  130 VVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLKNLVEIIEHGLSDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSH--RG----KVLAAFLKAIGFIIPLMDALYASYYTKEVMQVLIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPDFFKHFWVRRMALDRRNYKQLVETTVEMANKVGVTGIVGKIVEDLKDESEPYRRMVMETIEKVVANLGASDIDPRLEELLIDGILYAFQEQ----------------TSDDANVMLNGFGAVVNALGQRVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAIVMKQCQE 464          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig74425.17619.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2KGK3_9STRA1.090e-9446.67Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A835R3I1_VANPL2.380e-9145.38Uncharacterized protein n=1 Tax=Vanilla planifolia... [more]
A0A6J5Y913_PRUAR5.370e-9145.66SF3b1 domain-containing protein n=2 Tax=Mesangiosp... [more]
A0A6J5VL48_PRUAR5.510e-9145.66SF3b1 domain-containing protein n=1 Tax=Prunus arm... [more]
A0A7S2EPV0_9STRA1.940e-9047.77Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A835Q468_VANPL4.250e-9044.82TOG domain-containing protein n=5 Tax=Vanilla plan... [more]
A0A4S4CXY7_CAMSI7.270e-9045.94Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
A0A7S1Y9D5_9STRA1.360e-8945.94Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A164YJX2_DAUCS2.270e-8946.50TOG domain-containing protein n=3 Tax=Daucus carot... [more]
A0A453NAN5_AEGTS5.400e-8945.38TOG domain-containing protein n=1 Tax=Aegilops tau... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig74425contigM-pyrifera_M_contig74425:3..1070 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score295.0
Seed ortholog evalue4.4e-77
Seed eggNOG ortholog41875.XP_007509297.1
KEGG koko:K12828
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Splicing factor 3B subunit
EggNOG OGs37IBH@33090,COG5181@1,KOG0213@2759
COG Functional cat.A
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko03041
Exons1
Model size1068
Cds size1038
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816642.9671252-UTR-M-pyrifera_M_contig74425:2..321622816642.9671252-UTR-M-pyrifera_M_contig74425:2..32Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74425 3..32 +
1692278094.797247-UTR-M-pyrifera_M_contig74425:2..321692278094.797247-UTR-M-pyrifera_M_contig74425:2..32Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig74425 3..32 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816642.978322-CDS-M-pyrifera_M_contig74425:32..10701622816642.978322-CDS-M-pyrifera_M_contig74425:32..1070Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74425 33..1070 +
1692278094.811608-CDS-M-pyrifera_M_contig74425:32..10701692278094.811608-CDS-M-pyrifera_M_contig74425:32..1070Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig74425 33..1070 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig74425.17619.1prot_M-pyrifera_M_contig74425.17619.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig74425 33..1070 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig74425.17619.1

>prot_M-pyrifera_M_contig74425.17619.1 ID=prot_M-pyrifera_M_contig74425.17619.1|Name=mRNA_M-pyrifera_M_contig74425.17619.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=346bp
MLPLLRAVAGAKSWQARHTGCKVVQQTALLLRSGVLPCLTELVQVIAPAL
EDGDSKVRSIAALATRALAEASAPFGIESFDPVLKPVHKAVTDMGTRGGL
SPRTLAAFLGAAGALVPLMEPRHAQWFASQILPGTLAQASSPDEEVRRTV
LRVLRQCVGAEGVGAELVRNEVLPRLFEAFWVRRSALDRRTGMELLATTA
ALGAKLGASPVLSRLAPDLKDESEPYRRLVLRAVHRVLEEQGAGDVGEDL
EELLLDGAIAAFREQGVASAALEDQGDTASRASAAAKEVLDGVAAVLSAL
GVRVKPYLSQILTVARHRLTHRAASIRLQAAQLVERVAPLLKECEE
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mRNA from alignment at M-pyrifera_M_contig74425:3..1070+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig74425.17619.1 ID=mRNA_M-pyrifera_M_contig74425.17619.1|Name=mRNA_M-pyrifera_M_contig74425.17619.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig74425:3..1070+ (Macrocystis pyrifera P11B4 male)
GTGGTGGCGCAGACTCTGGGAGTGGAGCCAATGTTGCCTCTGCTTCGAGC AGTCGCGGGAGCAAAATCGTGGCAGGCCAGACACACCGGGTGCAAGGTGG TGCAGCAGACTGCGCTGTTGCTGCGATCTGGAGTGCTGCCTTGTCTCACG GAGTTGGTGCAGGTGATTGCGCCCGCGTTGGAAGACGGCGACTCCAAGGT GCGATCCATCGCTGCTCTGGCCACGAGAGCTCTCGCCGAAGCCTCTGCTC CATTCGGCATCGAGAGCTTCGACCCGGTGCTCAAGCCCGTGCACAAGGCT GTCACCGACATGGGCACGCGCGGAGGCCTCTCTCCACGCACTCTGGCCGC CTTTCTCGGCGCTGCTGGCGCACTGGTGCCTCTGATGGAGCCTCGCCACG CCCAGTGGTTCGCGTCCCAGATTCTACCGGGCACGCTGGCACAAGCCTCT TCTCCAGACGAGGAAGTGAGGCGCACTGTGCTGCGCGTGCTGCGGCAGTG TGTCGGTGCGGAAGGCGTCGGTGCGGAACTGGTGCGGAACGAAGTCCTCC CGAGACTCTTCGAGGCATTCTGGGTGCGGAGGTCTGCGCTCGACAGGAGA ACTGGCATGGAACTCCTCGCAACCACTGCAGCCCTGGGCGCAAAGCTCGG AGCCTCTCCAGTGCTCTCTCGCCTCGCACCCGACCTCAAAGACGAGAGTG AGCCATACCGCCGACTGGTGCTGCGTGCGGTGCACAGAGTGTTGGAGGAA CAAGGCGCCGGGGACGTGGGAGAGGATTTGGAGGAGTTGTTGCTTGACGG AGCGATTGCTGCCTTTCGGGAACAAGGAGTGGCGTCGGCAGCACTAGAAG ACCAAGGTGACACTGCCAGTCGAGCCTCAGCTGCTGCAAAAGAAGTGCTG GATGGAGTAGCGGCGGTATTGTCTGCGCTGGGAGTTCGAGTCAAACCTTA CCTCTCCCAGATCCTCACTGTGGCAAGACACCGCCTCACGCACCGCGCCG CCAGTATTCGACTGCAGGCAGCGCAGTTGGTGGAACGGGTGGCACCTCTG TTGAAGGAGTGTGAGGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig74425:3..1070+

>mRNA_M-pyrifera_M_contig74425.17619.1 ID=mRNA_M-pyrifera_M_contig74425.17619.1|Name=mRNA_M-pyrifera_M_contig74425.17619.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2076bp|location=Sequence derived from alignment at M-pyrifera_M_contig74425:3..1070+ (Macrocystis pyrifera P11B4 male)
ATGTTGCCTCTGCTTCGAGCAGTCGCGGGAGCAAAATCGTGGCAGGCCAG
ACACACCGGGTGCAAGGTGGTGCAGCAGACTGCGCTGTTGCTGCGATCTG
GAGTGCTGCCTTGTCTCACGGAGTTGGTGCAGGTGATTGCGCCCGCGTTG
GAAGACGGCGACTCCAAGGTGCGATCCATCGCTGCTCTGGCCACGAGAGC
TCTCGCCGAAGCCTCTGCTCCATTCGGCATCGAGAGCTTCGACCCGGTGC
TCAAGCCCGTGCACAAGGCTGTCACCGACATGGGCACGCGCGGAGGCCTC
TCTCCACGCACTCTGGCCGCCTTTCTCGGCGCTGCTGGCGCACTGGTGCC
TCTGATGGAGCCTCGCCACGCCCAGTGGTTCGCGTCCCAGATTCTACCGG
GCACGCTGGCACAAGCCTCTTCTCCAGACGAGGAAGTGAGGCGCACTGTG
CTGCGCGTGCTGCGGCAGTGTGTCGGTGCGGAAGGCGTCGGTGCGGAACT
GGTGCGGAACGAAGTCCTCCCGAGACTCTTCGAGGCATTCTGGGTGCGGA
GGTCTGCGCTCGACAGGAGAACTGGCATGGAACTCCTCGCAACCACTGCA
GCCCTGGGCGCAAAGCTCGGAGCCTCTCCAGTGCTCTCTCGCCTCGCACC
CGACCTCAAAGACGAGAGTGAGCCATACCGCCGACTGGTGCTGCGTGCGG
TGCACAGAGTGTTGGAGGAACAAGGCGCCGGGGACGTGGGAGAGGATTTG
GAGGAGTTGTTGCTTGACGGAGCGATTGCTGCCTTTCGGGAACAAGGAGT
GGCGTCGGCAGCACTAGAAGACCAAGGTGACACTGCCAGTCGAGCCTCAG
CTGCTGCAAAAGAAGTGCTGGATGGAGTAGCGGCGGTATTGTCTGCGCTG
GGAGTTCGAGTCAAACCTTACCTCTCCCAGATCCTCACTGTGGCAAGACA
CCGCCTCACGCACCGCGCCGCCAGTATTCGACTGCAGGCAGCGCAGTTGG
TGGAACGGGTGGCACCTCTGTTGAAGGAGTGTGAGGAGATGTTGCCTCTG
CTTCGAGCAGTCGCGGGAGCAAAATCGTGGCAGGCCAGACACACCGGGTG
CAAGGTGGTGCAGCAGACTGCGCTGTTGCTGCGATCTGGAGTGCTGCCTT
GTCTCACGGAGTTGGTGCAGGTGATTGCGCCCGCGTTGGAAGACGGCGAC
TCCAAGGTGCGATCCATCGCTGCTCTGGCCACGAGAGCTCTCGCCGAAGC
CTCTGCTCCATTCGGCATCGAGAGCTTCGACCCGGTGCTCAAGCCCGTGC
ACAAGGCTGTCACCGACATGGGCACGCGCGGAGGCCTCTCTCCACGCACT
CTGGCCGCCTTTCTCGGCGCTGCTGGCGCACTGGTGCCTCTGATGGAGCC
TCGCCACGCCCAGTGGTTCGCGTCCCAGATTCTACCGGGCACGCTGGCAC
AAGCCTCTTCTCCAGACGAGGAAGTGAGGCGCACTGTGCTGCGCGTGCTG
CGGCAGTGTGTCGGTGCGGAAGGCGTCGGTGCGGAACTGGTGCGGAACGA
AGTCCTCCCGAGACTCTTCGAGGCATTCTGGGTGCGGAGGTCTGCGCTCG
ACAGGAGAACTGGCATGGAACTCCTCGCAACCACTGCAGCCCTGGGCGCA
AAGCTCGGAGCCTCTCCAGTGCTCTCTCGCCTCGCACCCGACCTCAAAGA
CGAGAGTGAGCCATACCGCCGACTGGTGCTGCGTGCGGTGCACAGAGTGT
TGGAGGAACAAGGCGCCGGGGACGTGGGAGAGGATTTGGAGGAGTTGTTG
CTTGACGGAGCGATTGCTGCCTTTCGGGAACAAGGAGTGGCGTCGGCAGC
ACTAGAAGACCAAGGTGACACTGCCAGTCGAGCCTCAGCTGCTGCAAAAG
AAGTGCTGGATGGAGTAGCGGCGGTATTGTCTGCGCTGGGAGTTCGAGTC
AAACCTTACCTCTCCCAGATCCTCACTGTGGCAAGACACCGCCTCACGCA
CCGCGCCGCCAGTATTCGACTGCAGGCAGCGCAGTTGGTGGAACGGGTGG
CACCTCTGTTGAAGGAGTGTGAGGAG
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