mRNA_M-pyrifera_M_contig7440.17615.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig7440.17615.1
Unique NamemRNA_M-pyrifera_M_contig7440.17615.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A6H5KY43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY43_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 1.870e-113
Identity = 167/216 (77.31%), Postives = 187/216 (86.57%), Query Frame = 1 
Query:    1 IEVCNKTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPWGV 648
            +E+  +T+ MEDL AV+GE  L  +GAGPFWEAA RDPCGALVLFNYP FFR + PT NAG P   APVDLAVLDI RDR+RG+PRFNDMRRA+NMNPIKKWSDLTKD EYQ+A LQEVYGDDV+L D LVGNLAEDKI+GFAISETSFH+FIVMASRRLE+DRFFTKDFTPEVYSQE +DRV+NTE +RDLL RHFPD A ++PK QSAFKPWG 
Sbjct:  405 MELPGETVQMEDLVAVEGENTLRRIGAGPFWEAAVRDPCGALVLFNYPKFFRKLSPTDNAGTPDTTAPVDLAVLDIHRDRARGIPRFNDMRRALNMNPIKKWSDLTKDKEYQEA-LQEVYGDDVELLDVLVGNLAEDKIDGFAISETSFHIFIVMASRRLEADRFFTKDFTPEVYSQEAFDRVTNTEGMRDLLERHFPDIARQVPKTQSAFKPWGA 619
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A6I9S3U3_ELAGV (alpha-dioxygenase 1 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9S3U3_ELAGV)

HSP 1 Score: 198 bits (503), Expect = 4.100e-58
Identity = 103/207 (49.76%), Postives = 134/207 (64.73%), Query Frame = 1 
Query:   22 ISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPW 642
            I MEDL  ++GE  L  +G      +     CGAL L+NYP FFR + P    G   PD  VD+  L+++RDR R VPR+N  RR + M PI KW DLT D E  +  L+EVYGDDV+  D LVG +AE KI+GFAISET+F +FI+MASRRLE+DRFFT  F  + Y+++G+  V+ TE +RD++ RH PDTA +     SAF  W
Sbjct:  204 IKMEDLVGIRGESTLTKIGFERQLVSMGHQACGALELWNYPWFFRNLIPQNVDGSERPDN-VDMPALEVYRDRERSVPRYNQFRRGLLMIPISKWEDLTDDHEAVET-LREVYGDDVEKLDLLVGLMAEKKIKGFAISETAFFIFIIMASRRLEADRFFTSYFNEKTYTKKGFKWVNTTESLRDVIQRHHPDTAKKWMNSTSAFSVW 408
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A1Y1IDI0_KLENI (Alpha-dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDI0_KLENI)

HSP 1 Score: 202 bits (515), Expect = 5.700e-58
Identity = 112/213 (52.58%), Postives = 141/213 (66.20%), Query Frame = 1 
Query:   16 KTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLT--KDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPD--TANRIPKGQSAFKPW 642
            K + MEDL  ++GE+ L++ G      +     CG L L NYPNF R I P    G P  D  VD+A L+I+RDR R VPR+N+ RR ++  PIK W+DLT   DTE  Q+ L+ VYGDDV+  D LVG  AE  I GFAISET+F++FI+MASRRLE+DRFFT DF PEVY+ EG++RV +TE I DLL RH+PD  +A    KG S F  W
Sbjct:  413 KLVPMEDLHGIQGERTLLEEGPLVMLTSLGFQSCGLLCLNNYPNFMRDIAPENVDGTPRGDH-VDMAALEIWRDRERNVPRYNNFRRQLHAAPIKTWADLTGPDDTE-TQSKLRSVYGDDVEKLDLLVGMQAERFIPGFAISETAFYIFIIMASRRLEADRFFTSDFRPEVYTPEGFERVRSTEGIADLLKRHYPDLYSAFLASKGISGFNTW 623
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: UPI000C1D3218 (alpha-dioxygenase 1 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D3218)

HSP 1 Score: 200 bits (509), Expect = 3.850e-57
Identity = 103/209 (49.28%), Postives = 141/209 (67.46%), Query Frame = 1 
Query:   16 KTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPW 642
            K + M +L   KGE+NL ++G      +     CGAL L+NYPN+FR + P    G   PD P+DL  L+I+RDR R V R+ND RR++ + PI KWS+LT D E  +A L+EVYGDDV+  D LVG +AE KI+GFAISET+F +F++MASRRLE+DRFFT DF  + Y+++G + V+ TE ++D+L RH+PD   +     SAF  W
Sbjct:  419 KEMDMRELIGHKGEQNLQNIGFTKQMVSMGHQACGALELWNYPNWFRALIPQEVDGSDRPD-PIDLPALEIYRDRERNVARYNDFRRSLFLIPISKWSELTDDEEAVRA-LREVYGDDVEELDLLVGLMAEKKIKGFAISETAFTIFLIMASRRLEADRFFTSDFNEKAYTKKGLEWVNTTESLKDVLDRHYPDMTKKWMNSGSAFSVW 625
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BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A5B6UA52_9ROSI (Peroxidase n=1 Tax=Gossypium australe TaxID=47621 RepID=A0A5B6UA52_9ROSI)

HSP 1 Score: 188 bits (478), Expect = 9.850e-57
Identity = 96/212 (45.28%), Postives = 138/212 (65.09%), Query Frame = 1 
Query:   13 NKTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPWGV 648
            N  + M ++   +GE+ +  +G      +      GA+ L+NYP++ R + P    G  +PD PVD+A L+I+RDR RGV R+N+ RR + M PI KW DLT D E  +A L EVYG+DV+  D LVG  AE KI+GFAISET+F +F++MASRRLE+DRFFT +F P+ Y+++G + V+ TE ++D++ RHFPD   +  +  SAF  W  
Sbjct:    2 NIRVPMTEMTGKEGERRMSKIGMEQMLVSMGHQASGAVTLWNYPSWMRNLIPHDIKGEEVPD-PVDMAALEIYRDRERGVARYNEFRRNLLMIPISKWEDLTDDCEVIEA-LSEVYGEDVEKLDLLVGLQAEKKIKGFAISETAFFIFLLMASRRLEADRFFTTNFNPKTYTEKGLEWVNKTETLKDVIDRHFPDMTAKWMRCSSAFSVWSA 211
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BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A371E6W1_MUCPR (Alpha-dioxygenase 1 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371E6W1_MUCPR)

HSP 1 Score: 194 bits (493), Expect = 1.600e-56
Identity = 101/209 (48.33%), Postives = 138/209 (66.03%), Query Frame = 1 
Query:   16 KTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPW 642
            K I M++L  ++GEK L ++G      +     CGAL L+NYP F R + P    G   PD  VDLA L+I+RDR R V R+N  RRA+ + PI KW DLT D E  Q  L+EVYGDDV+  D LVG +AE KI+GFAISET+F +F++MASRRLE+DRFFT +F  E Y+++G + V+ TE ++D++ RH+P+  ++     SAF  W
Sbjct:  212 KEIPMKNLIGLQGEKTLTEIGVARQLVSMGHQACGALELWNYPVFLRDLVPQNLDGTERPDH-VDLAALEIYRDRERSVARYNQFRRALLLIPISKWEDLTDDKEAIQV-LEEVYGDDVEELDLLVGLMAEKKIKGFAISETAFVIFLLMASRRLEADRFFTSNFNEEAYTKKGLEWVNTTESLKDVIDRHYPEMIHKWLNSSSAFSVW 418
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: UPI0018AF417A (alpha-dioxygenase 1 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF417A)

HSP 1 Score: 198 bits (504), Expect = 1.670e-56
Identity = 103/207 (49.76%), Postives = 136/207 (65.70%), Query Frame = 1 
Query:   22 ISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPW 642
            I ME+L  +KGE++L  +G      +      GAL L+NYP FFR +      G P PD  VDLA L+++RDR R VPR+N  RR M M PI KW DLT D E  +  L+EVYGDDV+  D +VG +AE KI+GFAISET+F +FI+MASRRLE+DRFFT  F  + Y+++G+  V+NTE +RD++ RHFP+   +     SAF  W
Sbjct:  409 IKMEELIGIKGEESLASIGFERQLVSMGHQASGALELWNYPLFFRDLVAQNVDGTPRPDH-VDLAALEVYRDRERNVPRYNQFRRGMLMIPISKWEDLTDDKEAIET-LREVYGDDVEKLDLIVGLMAEKKIKGFAISETAFFIFIIMASRRLEADRFFTSYFNEKTYTKKGFAWVNNTESLRDVITRHFPEITTKWLNSTSAFSVW 613
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: UPI000D62A392 (alpha-dioxygenase 1-like n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62A392)

HSP 1 Score: 197 bits (500), Expect = 4.860e-56
Identity = 104/209 (49.76%), Postives = 134/209 (64.11%), Query Frame = 1 
Query:   16 KTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPW 642
            K + M +L    GEK L  +G      +     CGAL L+NYP + R I P    G   PD  +DLA LDI+RDR R VPR+ND RR++ M PI KW DLT D +  +  L EVY DDV+  D LVG  AE KI+GFAISET+F VF+ MASRRLE+DRFFT DF  EVY+++G++ V+ TE ++D+L RH+P+  +R     SAF  W
Sbjct:  389 KKVDMINLIGKNGEKELSKIGFTTQMVSMGHQACGALELYNYPTWLRNIVPQNLDGTDRPDH-IDLASLDIYRDRERNVPRYNDFRRSLFMIPISKWDDLTDDKQAIEM-LHEVYDDDVEQLDLLVGMAAEKKIKGFAISETAFIVFLTMASRRLEADRFFTSDFNEEVYTKKGFEWVNTTESLKDVLYRHYPEMIDRWMNSTSAFSVW 595
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A2Z6NYP7_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NYP7_TRISU)

HSP 1 Score: 190 bits (483), Expect = 5.890e-56
Identity = 99/211 (46.92%), Postives = 136/211 (64.45%), Query Frame = 1 
Query:   16 KTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPWGV 648
            K I M DL  +KGEK L+++G      +     CG+L L+NYP++ R + P    G    D  VDLA L+I+RDR R V ++N  RR + M PI KW DLT D E  +  L+EVYGDDV+  D LVG LAE KI+GFAISET+F +F++MASRRLE DRFFT +F  E Y+++G + V+ TE ++D++ RH P+  ++     SAF  W +
Sbjct:  126 KEIPMNDLIGLKGEKTLLEIGVAKQLVSMGHQACGSLELWNYPSWLRDLVPHNLDGTERSDH-VDLAALEIYRDRERSVAKYNQFRRGLLMIPISKWEDLTNDKEVIKV-LKEVYGDDVEELDVLVGLLAEKKIKGFAISETAFTIFLLMASRRLEGDRFFTSNFNEETYTKKGLEWVNTTESLKDVIDRHHPNMTHKWLNSSSAFSVWDL 334
[Close]
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Match: A0A6A5NBB9_LUPAL (Uncharacterized protein n=3 Tax=Lupinus TaxID=3869 RepID=A0A6A5NBB9_LUPAL)

HSP 1 Score: 196 bits (498), Expect = 1.510e-55
Identity = 102/209 (48.80%), Postives = 138/209 (66.03%), Query Frame = 1 
Query:   16 KTISMEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTNAGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDTEYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRRLESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQSAFKPW 642
            K I M++L  +KGEK L ++G      +     CGAL L+NYP +FR I P    G   PD  VDL  L+I+RDR R V ++N  RRA+ + PI KW DLT D E  Q  L+EVYGDDV+  D LVG +AE KI+GFAISET+F +F++MASRRLE+DRFFT +F  E YS++G + V+ TE ++D++ RH+P+  ++     SAF  W
Sbjct:  419 KEIPMKNLIGLKGEKTLTEIGVARQMVSMGHQACGALELWNYPLWFRDIIPHNVDGTERPDL-VDLPALEIYRDRERSVAKYNQFRRALLLIPISKWEDLTDDKEAIQV-LEEVYGDDVEELDLLVGQMAEKKIKGFAISETAFVIFLLMASRRLEADRFFTSNFNEESYSKKGLEWVNTTESLKDVIDRHYPEMTHKWMNSSSAFSVW 625
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig7440.17615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KY43_9PHAE1.870e-11377.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6I9S3U3_ELAGV4.100e-5849.76alpha-dioxygenase 1 n=1 Tax=Elaeis guineensis var.... [more]
A0A1Y1IDI0_KLENI5.700e-5852.58Alpha-dioxygenase n=1 Tax=Klebsormidium nitens Tax... [more]
UPI000C1D32183.850e-5749.28alpha-dioxygenase 1 n=1 Tax=Olea europaea var. syl... [more]
A0A5B6UA52_9ROSI9.850e-5745.28Peroxidase n=1 Tax=Gossypium australe TaxID=47621 ... [more]
A0A371E6W1_MUCPR1.600e-5648.33Alpha-dioxygenase 1 (Fragment) n=1 Tax=Mucuna prur... [more]
UPI0018AF417A1.670e-5649.76alpha-dioxygenase 1 n=1 Tax=Dioscorea cayennensis ... [more]
UPI000D62A3924.860e-5649.76alpha-dioxygenase 1-like n=1 Tax=Cynara cardunculu... [more]
A0A2Z6NYP7_TRISU5.890e-5646.92Uncharacterized protein n=1 Tax=Trifolium subterra... [more]
A0A6A5NBB9_LUPAL1.510e-5548.80Uncharacterized protein n=3 Tax=Lupinus TaxID=3869... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig7440contigM-pyrifera_M_contig7440:5273..9991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score199.1
Seed ortholog evalue2e-48
Seed eggNOG ortholog42345.XP_008778938.1
KEGG koko:K10529
KEGG Pathwayko00592,map00592
Hectar predicted targeting categoryother localisation
GOsGO:0000302,GO:0001101,GO:0001516,GO:0001561,GO:0001676,GO:0002376,GO:0003008,GO:0003013,GO:0003674,GO:0003824,GO:0004601,GO:0004666,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005811,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006690,GO:0006692,GO:0006693,GO:0006805,GO:0006950,GO:0006952,GO:0006955,GO:0006979,GO:0008015,GO:0008150,GO:0008152,GO:0008217,GO:0008219,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009410,GO:0009605,GO:0009607,GO:0009617,GO:0009620,GO:0009627,GO:0009636,GO:0009719,GO:0009725,GO:0009737,GO:0009751,GO:0009814,GO:0009987,GO:0010033,GO:0010035,GO:0012505,GO:0012511,GO:0014070,GO:0016020,GO:0016042,GO:0016053,GO:0016054,GO:0016209,GO:0016491,GO:0016684,GO:0016701,GO:0016702,GO:0016705,GO:0019369,GO:0019371,GO:0019395,GO:0019752,GO:0030258,GO:0031090,GO:0031984,GO:0032501,GO:0032787,GO:0032870,GO:0033554,GO:0033559,GO:0033993,GO:0034440,GO:0034599,GO:0034614,GO:0035690,GO:0042175,GO:0042221,GO:0042493,GO:0042742,GO:0042759,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045087,GO:0046394,GO:0046395,GO:0046456,GO:0046457,GO:0046677,GO:0050832,GO:0050896,GO:0051213,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071229,GO:0071236,GO:0071241,GO:0071310,GO:0071407,GO:0071446,GO:0071466,GO:0071495,GO:0071704,GO:0071731,GO:0071732,GO:0072329,GO:0072330,GO:0097237,GO:0097305,GO:0097366,GO:0098542,GO:0098754,GO:0098827,GO:0098869,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902170,GO:1902609,GO:1990748
EggNOG free text desc.Animal haem peroxidase
EggNOG OGs37IX6@33090,3GDF8@35493,3KU5T@4447,KOG2408@1,KOG2408@2759
COG Functional cat.S
Best tax levelLiliopsida
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons6
Model size657
Cds size630
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816642.4661155-CDS-M-pyrifera_M_contig7440:5272..54101622816642.4661155-CDS-M-pyrifera_M_contig7440:5272..5410Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 5273..5410 -
1692278094.4112303-CDS-M-pyrifera_M_contig7440:5272..54101692278094.4112303-CDS-M-pyrifera_M_contig7440:5272..5410Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 5273..5410 -
1622816642.4799647-CDS-M-pyrifera_M_contig7440:5605..56901622816642.4799647-CDS-M-pyrifera_M_contig7440:5605..5690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 5606..5690 -
1692278094.4258835-CDS-M-pyrifera_M_contig7440:5605..56901692278094.4258835-CDS-M-pyrifera_M_contig7440:5605..5690Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 5606..5690 -
1622816642.4903128-CDS-M-pyrifera_M_contig7440:6596..66941622816642.4903128-CDS-M-pyrifera_M_contig7440:6596..6694Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 6597..6694 -
1692278094.4369757-CDS-M-pyrifera_M_contig7440:6596..66941692278094.4369757-CDS-M-pyrifera_M_contig7440:6596..6694Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 6597..6694 -
1622816642.5012567-CDS-M-pyrifera_M_contig7440:7059..71481622816642.5012567-CDS-M-pyrifera_M_contig7440:7059..7148Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 7060..7148 -
1692278094.455789-CDS-M-pyrifera_M_contig7440:7059..71481692278094.455789-CDS-M-pyrifera_M_contig7440:7059..7148Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 7060..7148 -
1622816642.5134013-CDS-M-pyrifera_M_contig7440:8270..84211622816642.5134013-CDS-M-pyrifera_M_contig7440:8270..8421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 8271..8421 -
1692278094.4682996-CDS-M-pyrifera_M_contig7440:8270..84211692278094.4682996-CDS-M-pyrifera_M_contig7440:8270..8421Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 8271..8421 -
1622816642.5240831-CDS-M-pyrifera_M_contig7440:9895..99641622816642.5240831-CDS-M-pyrifera_M_contig7440:9895..9964Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 9896..9964 -
1692278094.4805717-CDS-M-pyrifera_M_contig7440:9895..99641692278094.4805717-CDS-M-pyrifera_M_contig7440:9895..9964Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig7440 9896..9964 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816642.5363052-UTR-M-pyrifera_M_contig7440:9964..99911622816642.5363052-UTR-M-pyrifera_M_contig7440:9964..9991Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7440 9965..9991 -
1692278094.4918218-UTR-M-pyrifera_M_contig7440:9964..99911692278094.4918218-UTR-M-pyrifera_M_contig7440:9964..9991Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig7440 9965..9991 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig7440.17615.1prot_M-pyrifera_M_contig7440.17615.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig7440 5273..9964 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig7440.17615.1

>prot_M-pyrifera_M_contig7440.17615.1 ID=prot_M-pyrifera_M_contig7440.17615.1|Name=mRNA_M-pyrifera_M_contig7440.17615.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
MEDLCAVKGEKNLVDLGAGPFWEAATRDPCGALVLFNYPNFFRTIPPTTN
AGVPLPDAPVDLAVLDIFRDRSRGVPRFNDMRRAMNMNPIKKWSDLTKDT
EYQQAALQEVYGDDVDLCDTLVGNLAEDKIEGFAISETSFHVFIVMASRR
LESDRFFTKDFTPEVYSQEGYDRVSNTEDIRDLLLRHFPDTANRIPKGQS
AFKPWGVQS*
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mRNA from alignment at M-pyrifera_M_contig7440:5273..9991-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig7440.17615.1 ID=mRNA_M-pyrifera_M_contig7440.17615.1|Name=mRNA_M-pyrifera_M_contig7440.17615.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4719bp|location=Sequence derived from alignment at M-pyrifera_M_contig7440:5273..9991- (Macrocystis pyrifera P11B4 male)
ATAGAGGTGTGCAATAAAACCATCAGCATGGAGGATCTCTGCGCCGTAAA
GGGAGAGAAGAATCTTGTCGATCTTGGCGCCGGGCCCTTCTGGGAGGTGG
GTGGCTCTATGGTGCCGGTACGCGCCAGCCCACAATTCCGGCACTACAGC
GGCAATCGGCACTGATCCGCGCACCCATTAGTCGGATACGTAGGTGTCGC
ACCCAAACCTTCTCACCCTTGCCCACACTGGTTCATTCTCACCCTTGCCC
ACACTGGTTCATGACATCTGTGCCAAGCGGTTTCGCAGGCACTATATTAG
CAGGCAGCCGGGACTAGTCAACCGGCACTATGGAGGGACCACTACTCGTA
CAGCAGTTGTATTAATATGAATCGTACATATCAACTGAGGAAGACTGCTG
TCGTATTCATGGTTAAAGTGCTGCTACTACGGGGACCACAGTAAATAGGA
CCAAACATTGTTAGCAAAAATAGGTAAATATATAGGTTTTATGTATACCA
TAAGTCCTATTAACTATGGACCCCCCGTAATAGTAATACTGCTGTATGCG
CACACTTCTATGAACCTCTCCGGGACTTCAGAGGGGAAAAAAGGGCTGTG
AAAAGTGACGCTGATTGTAGCAACCATTGTGGCCACCGCGTGGTTGGGGG
ATGATACAACGGTTGGTGTCCGAGTTACAATGGTTGATGCAAGGAGTCGT
ACGGAACGGGCGCGCAGTATGATCTTACCCTCGCTGCCGGTCGCTCACTC
TGCTCGTACGCACTCAGCAGTAGTTGACAAACACCCACGTTTTGTTTTAA
TTGTGTGAGTTGCTATCGAGGGCTCCCAAAAGGGGTTAATAGTTGCACTG
CTACTGCTACTACCACTACTACCACTACTACTACTACTACTACTACTACT
ACTACTACTATTACTACTACTACTACTACCACCACTACTACTACTGCTGC
TGCTACTATACCACTAGTACTACTATTTATACTACTACCTCTACTACTGC
TACTACTACTACTACTACTACTACTACTACTACTACTACCACTAGTACTA
CTATTTATACTACTACCTCTACTACTGCTAATACCACTACTACTACCACT
ACTACCACTACTACTACTACTACTACTACTACTACTACTACTACTACTAC
CACTACTACTACAACCACCACCACTACTACTACTACCACTACTACTACTA
CTACTACTACTACTACTACTACTACTACTACTACTACCACTTCTCTTCTA
CAGCAGTAGGCCCATCGTGCTCAACATTAATACAAATATTCCAGTACAAA
ATTTCCGCCCAAGAGACCATTACCCGGCAACCAGTACTACGGCAGCCTAC
TCTGCTTATTGCCATGGCGCTACGACAACATAATAATACCAAATTTAGTT
CTGCTCATTTTCAAGACTTTTACACATGTAAAAGCAAACCCGGTACCAAC
GACCCATCCACACCTTCCCAGGCAAAAACAGGTAACCTTACTCCCCCGTT
CGCCCGCCCACCCGTCCGCGCACCCACCCACCCGCCCGGCCACTTCGCTG
TGCTTTCCACAACTCCGCAGGCGGCTACCCGCGACCCATGTGGCGCCCTG
GTGCTATTTAACTACCCCAACTTCTTCAGAACAATCCCACCCACCACGAA
CGCGGGTGTCCCCCTGCCCGATGCGCCGGTCGACCTCGCGGTGCTGGACA
TCTTTAGGGACCGCTCCCGAGGTACGACGCAAGGCAGAGCAGGGCGGCGG
GGTGGGATGCGGGCATGGTCGATTTTTTGCCAAGGGTCAGTCAATATCGG
TGGTCGTGAGTTACTTAGTTTCCGCTTGCAGGGGTGCGGATGCTTGAATA
GGGTGTTCGCGAAGAGATCGACTGTATTTTGTTTGGCCTCTTGTAGTTCC
TATAGAATAGCAGTCCCAACCCACGAAAAAATTAGGATCATCCTAATAGC
TGCAGAAAAAAGTGACCAACGTAACGCTTTAAACCCACGCATTCTTGGGT
TGTGGGTTAGTTAGCAGGCGGAGCAACTTCTTATTGGCTAGGGCGTTCGG
ATGCACCTGTTTAGCCAACCAGCTCCTCATGTTTGTTGGTTTCAACTATT
TTTATAACCCAACCGATTAGCATTATCGAAAACATCCTGTTGCTCCTACG
CGTTGGTAGGATCGAATAAGGCGGTCACAGTTGCTGTTGTCGTCGTTATT
GCGGCTCGGTGGTGCATTGAGGCGGCCGCCGAACTTGCTGTTGTTGTGTT
GGTTGCTGAGGTTGCCGACGGTACTGCTCGGCGGTGCGTTTTGGGTCGCC
GCCGACCGTCTGGAGTTGGGTGCGCGCGCGCTTTCAAGCCGCCTTGCGCG
GCGCTCCGCTCGCTCTCCGACAGATGGGTATCGATTTTTAGGAACAGCAG
TCGCAGGCATGTGTGACACGTTTTTGATCGTTTTGGTTGGAAGCTGGGGC
AAGGGCGCTGGTCTTGAGTACGGTGTTCGCTTTTGGTTTTCATTTGACTG
TTGGTTTTCGATTTGCTTTTGGTTCTGTACCTTTTAGTTGAGTTTTTTTT
GTTGTTGGGCCGACTGTCCGGTTGTTAGTCTAAAGTAGCCGGTGACTTGA
GTGTGGTCTGGTGCTGTGCCATTTTTTGTGTTATGGTCGGTTGGTGGCTC
GGTGGCTGTTTTGTTTTACTGCCAAGGTAGCTCGTTGATATGTTTCTCGA
CGTGTGTATTAAACGTCATTGTGAACTCCAAATATAGCACTCACCCCTCC
CCCCCTCCCTCGCCCCGTTACCGCAACCGCCGGCGATTACCCCGTACCCC
AACCCCCTGCGGATAACGCGGTGGCTGTGTCGCACTGAGCCAGGCGTGCC
GCGGTTCAACGACATGCGCCGCGCCATGAACATGAACCCGATCAAGAAGT
GGAGCGACCTCACGAAGGATACGGAGTACCAGGTGGGGCTTGCCGCACCG
CTCGTCAAGTTTGTTTTTGTTCAGAACGGACGACGAGGACAGCAGCGACG
GTATCAGTAGGAGCGGCAGCAGCAGCAACATGGCCGCCATCAACTTTTTT
TTTTTTTTCGGTTGTCCGGCCCCTCCGATCGACGACGATATTGATATTGC
TGATGCTAGCACTATTGGTGCTGGTATTGCTACCGCGGATGATATTGGTA
TCGCCAGTGCTAGTTCTATGGATAATGCTACCTGGTATTTGCTAACGCCG
TTAATATGATAAGAGACCCTCCTCGTGCTGTTTTCGTGCCGTGCGCGTAA
TCGTGCGCTTGGTGTCCTACTGTTGTTCCGCCCGGATCGATGTTGAGCAG
GCGGCGCTGCAGGAGGTGTACGGTGACGACGTGGACCTGTGCGACACGCT
CGTCGGAAACCTGGCCGAGGACAAGATCGAAGGCTTCGCCATCAGGTGAC
TACAAACGAAGAATGTAAAGCCCTAGCCAGATAAACTTGAAGCAATAATC
AAAAAGATGAGAAAAGCACGAAACCAGAAACTCAACGACAAACTCGAGAT
ACTGCTGCTGCTGTAAATAGACAGTCTGAACACGCGCGACCGGCGTATAT
TCGCTCAACCTGCGAAAGCTCGGGGGAGGGGGGGGGGGGGAGGTGGCAAA
GAGGTTGATTGGACTCACCACTGACTAATATCAGCAGGATTTTCAATACG
AAATGAAACGGCGGCAGTTTGCACGCGATGCTAAACACGGTACTGGCGCT
TACCTACCTTTTGGCTTCAGTAATTGAGAGTTTGCGTACTACGAGCGGAA
AACCATGAAGTATTACGTAGAGATTGATGTGGTTATTTTATTTCTCTGCT
TCTAGCGTCTTCTCTTTCGTTGTGTTGTAAAGAGTAGGGGAGGTAAACTG
AAGTAAAGAAGCTGTGACGACTACGGTAGGTAGTATGTGGCGTACTGTGT
TTCTTTTCGGGGGCTTACCTTTTCTTCAAGCAACGAACGCCTCACGTCGG
TCCGCCCTCTTTTTTGCTTGTGTTGTTCTTCCTTTTCTCTTTCCGGGCGT
CCCTAGCCTTTCTCAACATTTGTTATATTGTGTCATCATTTTCGCGTCAC
CCTCCCAGCTTTCCCATCAATACATAATGTAGTTATTCTCCAGTCTACGT
GCCTAATGCACCATTCGTTAATATTTTCCGCTCCAGTCTTGAGTACGAGT
CCGGTGCATGTTATCGGTTAACGCGCGCGTGGCCCCTTTTGGTTTTTCCG
AATGTCGTCGTGATCAGCTCTGCCGCTTGCCTCACGCCCCCCCCCCCCCT
CCCCTCTCCTCTCCTTTTTGCTTTTGTGTTTGTTTTATACTGCTGCTGCA
GCGAAACGTCTTTCCACGTCTTCATCGTCATGGCCAGCCGCCGTCTCGAG
TCGGACCGATTCTTCACCAAGGACTTCACCCCGGAGGTGCGATGCCCGAA
CCTGACCAATCAAACGTCGCCATGTTGTCCTGATTGGTGCCGTCCTCTTG
TCGATTATTGTGTATTTAGAGCTATGTGTGTGCACACCCCTGTACAAGGA
CTCGTACGGAAACCGTTTATCCTTAAACGGAACGACGCTGCTGCCCCGTT
TGCTGCTGACACGTCGTCGCGCCCGCAAAAGGTGTACTCCCAAGAGGGCT
ACGACCGCGTGTCCAACACGGAGGATATTCGGGATCTCCTCCTCCGCCAC
TTCCCGGACACCGCAAACCGAATCCCCAAGGGGCAGTCGGCCTTCAAGCC
GTGGGGGGTGCAGAGCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig7440:5273..9991-

>mRNA_M-pyrifera_M_contig7440.17615.1 ID=mRNA_M-pyrifera_M_contig7440.17615.1|Name=mRNA_M-pyrifera_M_contig7440.17615.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1260bp|location=Sequence derived from alignment at M-pyrifera_M_contig7440:5273..9991- (Macrocystis pyrifera P11B4 male)
ATGGAGGATCTCTGCGCCGTAAAGGGAGAGAAGAATCTTGTCGATCTTGG
CGCCGGGCCCTTCTGGGAGATGGAGGATCTCTGCGCCGTAAAGGGAGAGA
AGAATCTTGTCGATCTTGGCGCCGGGCCCTTCTGGGAGGCGGCTACCCGC
GACCCATGTGGCGCCCTGGTGCTATTTAACTACCCCAACTTCTTCAGAAC
AATCCCACCCACCACGAACGCGGGTGTCCCCCTGCCCGATGCGCCGGTCG
ACCTCGCGGTGCTGGACATCTTTAGGGACCGCTCCCGAGGCGGCTACCCG
CGACCCATGTGGCGCCCTGGTGCTATTTAACTACCCCAACTTCTTCAGAA
CAATCCCACCCACCACGAACGCGGGTGTCCCCCTGCCCGATGCGCCGGTC
GACCTCGCGGTGCTGGACATCTTTAGGGACCGCTCCCGAGGCGTGCCGCG
GTTCAACGACATGCGCCGCGCCATGAACATGAACCCGATCAAGAAGTGGA
GCGACCTCACGAAGGATACGGAGTACCAGGCGTGCCGCGGTTCAACGACA
TGCGCCGCGCCATGAACATGAACCCGATCAAGAAGTGGAGCGACCTCACG
AAGGATACGGAGTACCAGCAGGCGGCGCTGCAGGAGGTGTACGGTGACGA
CGTGGACCTGTGCGACACGCTCGTCGGAAACCTGGCCGAGGACAAGATCG
AAGGCTTCGCCATCAGCAGGCGGCGCTGCAGGAGGTGTACGGTGACGACG
TGGACCTGTGCGACACGCTCGTCGGAAACCTGGCCGAGGACAAGATCGAA
GGCTTCGCCATCAGCGAAACGTCTTTCCACGTCTTCATCGTCATGGCCAG
CCGCCGTCTCGAGTCGGACCGATTCTTCACCAAGGACTTCACCCCGGAGC
GAAACGTCTTTCCACGTCTTCATCGTCATGGCCAGCCGCCGTCTCGAGTC
GGACCGATTCTTCACCAAGGACTTCACCCCGGAGGTGTACTCCCAAGAGG
GCTACGACCGCGTGTCCAACACGGAGGATATTCGGGATCTCCTCCTCCGC
CACTTCCCGGACACCGCAAACCGAATCCCCAAGGGGCAGTCGGCCTTCAA
GCCGTGGGGGGTGCAGAGCTGAGTGTACTCCCAAGAGGGCTACGACCGCG
TGTCCAACACGGAGGATATTCGGGATCTCCTCCTCCGCCACTTCCCGGAC
ACCGCAAACCGAATCCCCAAGGGGCAGTCGGCCTTCAAGCCGTGGGGGGT
GCAGAGCTGA
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